Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0028590 Camellia sinensis var. sinensis HOM05D007734 ORTHO05D009807 4.2e-44 181.0 94 100.0
Actinidia40206 Actinidia chinensis HOM05D007734 ORTHO05D009807 1.1e-28 129.8 94 73.4
GSVIVG01017837001 Vitis vinifera HOM05D007734 ORTHO05D009807 2.7e-27 125.2 94 69.1
ClCG06G005560 Citrullus lanatus HOM05D007734 ORTHO05D009807 3.9e-26 121.3 96 63.5
Hma1.2p1_0643F.1_g194590 Hydrangea macrophylla HOM05D007734 ORTHO05D009807 5.1e-26 120.9 94 66.0
Gohir.D10G164200 Gossypium hirsutum HOM05D007734 ORTHO05D009807 8.7e-26 120.2 94 67.0
Gorai.011G183300 Gossypium raimondii HOM05D007734 ORTHO05D009807 8.7e-26 120.2 94 67.0
CiPaw.02G088300 Carya illinoinensis HOM05D007734 ORTHO05D009807 1.1e-25 119.8 92 69.6
MELO3C021378.2 Cucumis melo HOM05D007734 ORTHO05D009807 2.5e-25 118.6 96 62.5
Sed0016523 Sechium edule HOM05D007734 ORTHO05D009807 9.6e-25 116.7 94 67.0
CsaV3_6G005600 Cucumis sativus L. HOM05D007734 ORTHO05D009807 2.1e-24 115.5 93 61.3
Gohir.A09G061200 Gossypium hirsutum HOM05D007734 ORTHO05D009807 2.1e-24 115.5 94 63.8
Gohir.A10G104500 Gossypium hirsutum HOM05D007734 ORTHO05D009807 2.1e-24 115.5 94 64.9
MD13G1176100 Malus domestica HOM05D007734 ORTHO05D009807 2.8e-24 115.2 96 64.6
CiPaw.01G155700 Carya illinoinensis HOM05D007734 ORTHO05D009807 3.7e-24 114.8 94 60.6
Eucgr.H03661 Eucalyptus grandis HOM05D007734 ORTHO05D009807 3.7e-24 114.8 92 65.2
TWI09G1295 Tripterygium wilfordii HOM05D007734 ORTHO05D009807 6.2e-24 114.0 89 66.3
Haze_01029 Corylus avellana HOM05D007734 ORTHO05D009807 1.1e-23 113.2 94 63.8
Gorai.006G074800 Gossypium raimondii HOM05D007734 ORTHO05D009807 1.1e-23 113.2 94 64.9
Sed0021110 Sechium edule HOM05D007734 ORTHO05D009807 1.1e-23 113.2 94 63.8
MD16G1177900 Malus domestica HOM05D007734 ORTHO05D009807 1.4e-23 112.8 95 61.1
Oeu044804.1 Olea europaea HOM05D007734 ORTHO05D009807 1.4e-23 112.8 94 61.7
TWI73G0877 Tripterygium wilfordii HOM05D007734 ORTHO05D009807 1.4e-23 112.8 94 63.8
Migut.G00233 Erythranthe guttata HOM05D007734 ORTHO05D009807 1.8e-23 112.5 94 67.0
Aa31LG11G10850 Aethionema arabicum HOM05D007734 ORTHO05D009807 3.1e-23 111.7 89 62.9
Cfa015520 Carpinus fangiana HOM05D007734 ORTHO05D009807 3.1e-23 111.7 94 62.8
Gohir.D09G060100 Gossypium hirsutum HOM05D007734 ORTHO05D009807 3.1e-23 111.7 94 63.8
Duzib151G0459 Durio zibethinus HOM05D007734 ORTHO05D009807 4.0e-23 111.3 94 64.9
FAN07G1074 Fragaria x ananassa HOM05D007734 ORTHO05D009807 6.9e-23 110.5 92 58.7
QL06p006592 Quercus lobata HOM05D007734 ORTHO05D009807 6.9e-23 110.5 89 66.3
CAN.G627.13 Capsicum annuum HOM05D007734 ORTHO05D009807 9.0e-23 110.2 94 60.6
Lj4g0025137 Lotus japonicus HOM05D007734 ORTHO05D009807 9.0e-23 110.2 85 64.7
Dinv44448 Davidia involucrata HOM05D007734 ORTHO05D009807 2.0e-22 109.0 96 63.5
FAN17G2648 Fragaria x ananassa HOM05D007734 ORTHO05D009807 2.0e-22 109.0 92 57.6
Manes.03G189200 Manihot esculenta HOM05D007734 ORTHO05D009807 2.0e-22 109.0 89 64.0
Thecc.04G274000 Theobroma cacao HOM05D007734 ORTHO05D009807 2.0e-22 109.0 94 64.9
Peaxi162Scf00095g00125 Petunia axillaris HOM05D007734 ORTHO05D009807 5.8e-22 107.5 92 59.8
Ciclev10007097m.g Citrus clementina HOM05D007734 ORTHO05D009807 1.3e-21 106.3 88 61.4
Prupe.1G145200 Prunus persica HOM05D007734 ORTHO05D009807 1.3e-21 106.3 96 59.4
Glyma.17G021500 Glycine max HOM05D007734 ORTHO05D009807 1.7e-21 105.9 81 63.0
Sabra08G0163100 Salix brachista HOM05D007734 ORTHO05D009807 1.7e-21 105.9 78 66.7
CANSAT78G1562 Cannabis sativa HOM05D007734 ORTHO05D009807 2.2e-21 105.5 91 57.1
FvH4_4g16860 Fragaria vesca HOM05D007734 ORTHO05D009807 2.2e-21 105.5 89 55.1
FAN12G0936 Fragaria x ananassa HOM05D007734 ORTHO05D009807 2.2e-21 105.5 89 55.1
FAN12G2573 Fragaria x ananassa HOM05D007734 ORTHO05D009807 2.2e-21 105.5 89 55.1
Phvul.003G099200 Phaseolus vulgaris HOM05D007734 ORTHO05D009807 2.2e-21 105.5 84 63.1
RcHm_v2.0_Chr4g0420431 Rosa chinensis HOM05D007734 ORTHO05D009807 2.2e-21 105.5 89 57.3
arahy.Tifrunner.gnm1.ann1.80YKV9 Arachis hypogaea HOM05D007734 ORTHO05D009807 2.9e-21 105.1 92 56.5
Duzib052G0038 Durio zibethinus HOM05D007734 ORTHO05D009807 2.9e-21 105.1 94 62.8
SGA_v2.0_scaffold142G35667 Striga asiatica HOM05D007734 ORTHO05D009807 2.9e-21 105.1 90 58.9
Glyma.07G252900 Glycine max HOM05D007734 ORTHO05D009807 3.8e-21 104.8 81 64.2
arahy.Tifrunner.gnm1.ann1.F9B3QK Arachis hypogaea HOM05D007734 ORTHO05D009807 4.9e-21 104.4 92 56.5
BcaB01g05276 Brassica carinata HOM05D007734 ORTHO05D009807 8.4e-21 103.6 87 59.8
BolC3t13544H Brassica oleracea HOM05D007734 ORTHO05D009807 8.4e-21 103.6 87 59.8
C03p10680 Brassica napus HOM05D007734 ORTHO05D009807 1.4e-20 102.8 87 59.8
Nn4g26101 Nelumbo nucifera HOM05D007734 ORTHO05D009807 1.4e-20 102.8 94 58.5
Carub.0006s1717 Capsella rubella HOM05D007734 ORTHO05D009807 1.9e-20 102.4 84 60.7
BraA03t10238Z Brassica rapa HOM05D007734 ORTHO05D009807 2.5e-20 102.1 87 59.8
PSO302G0168 Papaver somniferum HOM05D007734 ORTHO05D009807 3.2e-20 101.7 93 54.8
Atru.chr4.2717 Acer truncatum HOM05D007734 ORTHO05D009807 4.2e-20 101.3 90 63.3
Thhalv10015120m.g Eutrema salsugineum HOM05D007734 ORTHO05D009807 4.2e-20 101.3 88 59.1
CARHR194160 Cardamine hirsuta HOM05D007734 ORTHO05D009807 5.5e-20 100.9 89 59.6
TAR365G0453 Trochodendron aralioides HOM05D007734 ORTHO05D009807 5.5e-20 100.9 94 57.4
Sp6g25520 Schrenkiella parvula HOM05D007734 ORTHO05D009807 7.1e-20 100.5 87 59.8
Solyc01g080590.3 Solanum lycopersicum HOM05D007734 ORTHO05D009807 7.1e-20 100.5 88 58.0
AL6G30210 Arabidopsis lyrata HOM05D007734 ORTHO05D009807 9.3e-20 100.1 89 57.3
AT5G18850 Arabidopsis thaliana HOM05D007734 ORTHO05D009807 9.3e-20 100.1 84 60.7
Nitab4.5_0009396g0030 Nicotiana tabacum HOM05D007734 ORTHO05D009807 9.3e-20 100.1 72 66.7
Potri.008G197300 Populus trichocarpa HOM05D007734 ORTHO05D009807 9.3e-20 100.1 78 64.1
Potri.010G026900 Populus trichocarpa HOM05D007734 ORTHO05D009807 9.3e-20 100.1 79 65.8
Sopen01g032410 Solanum pennellii HOM05D007734 ORTHO05D009807 9.3e-20 100.1 88 58.0
CDE05G0384 Ceratophyllum demersum HOM05D007734 ORTHO05D009807 1.6e-19 99.4 90 60.0
BcaB01g04888 Brassica carinata HOM05D007734 ORTHO05D009807 2.1e-19 99.0 86 59.3
PGSC0003DMG400032093 Solanum tuberosum HOM05D007734 ORTHO05D009807 2.1e-19 99.0 88 56.8
MBI19_g13511_MAGBIO Magnolia biondii HOM05D007734 ORTHO05D009807 2.7e-19 98.6 93 55.9
Ca_30429_v3 Cicer arietinum L. HOM05D007734 ORTHO05D009807 6.0e-19 97.4 85 57.6
Cc03_g02610 Coffea canephora HOM05D007734 ORTHO05D009807 1.0e-18 96.7 72 68.1
Lalb_Chr07g0177521 Lupinus albus HOM05D007734 ORTHO05D009807 7.4e-17 90.5 69 60.9
Psat4g030040 Pisum sativum HOM05D007734 ORTHO05D009807 2.8e-16 88.6 66 65.2
CDE05G0036 Ceratophyllum demersum HOM05D007734 ORTHO05D009807 1.8e-15 85.9 67 64.2
ATR0487G018 Amborella trichopoda HOM05D007734 ORTHO05D009807 2.4e-15 85.5 94 48.9
MSTRG.3964 Avicennia marina HOM05D007734 ORTHO05D009807 2.4e-15 85.5 108 49.1
THA.LOC104818832 Tarenaya hassleriana HOM05D002550 ORTHO05D003420 5.3e-15 84.3 70 60.0
Aqoxy5G00589 Aquilegia oxysepala HOM05D007734 ORTHO05D009807 6.9e-15 84.0 82 57.3
SEGI_32711 Sequoiadendron giganteum HOM05D007734 ORTHO05D009807 4.5e-14 81.3 85 48.2
Actinidia00065 Actinidia chinensis HOM05D007734 ORTHO05D009807 2.1e-11 72.4 69 56.5
Nitab4.5_0000059g0330 Nicotiana tabacum HOM05D007734 ORTHO05D009807 3.9e-10 68.2 55 58.2
FAN22G2010 Fragaria x ananassa HOM05D007734 ORTHO05D001690 1.7e-08 62.8 47 59.6
Sc13g0003750 Simmondsia chinensis HOM05D007734 ORTHO05D009807 2.8e-08 62.0 50 62.0
BcaB08g36639 Brassica carinata HOM05D007734 ORTHO05D009807 1.1e-07 60.1 41 65.9
A03p09150 Brassica napus HOM05D007734 ORTHO05D009807 4.1e-07 58.2 47 57.4
A10p20780 Brassica napus HOM05D007734 ORTHO05D009807 5.9e-06 54.3 42 57.1


User provided reference genes

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