Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0009293 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 1.9e-63 245.7 128 100.0
CSS0028561 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 1.9e-63 245.7 128 100.0
CSS0000801 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 3.7e-59 231.5 120 100.0
CANSAT78G1417 Cannabis sativa HOM05D006777 ORTHO05D008360 1.8e-58 229.2 120 98.3
Lj6A528G35 Lonicera japonica HOM05D006777 ORTHO05D008360 3.1e-58 228.4 124 95.2
GSVIVG01020914001 Vitis vinifera HOM05D006777 ORTHO05D008360 4.0e-58 228.0 120 98.3
Lj4g0000567 Lotus japonicus HOM05D006777 ORTHO05D008360 9.0e-58 226.9 120 97.5
MD04G1012700 Malus domestica HOM05D006777 ORTHO05D008360 9.0e-58 226.9 120 96.7
TAR362G0671 Trochodendron aralioides HOM05D006777 ORTHO05D008360 9.0e-58 226.9 120 95.8
CDE06G2004 Ceratophyllum demersum HOM05D006777 ORTHO05D008360 1.2e-57 226.5 120 96.7
Psat7g074160 Pisum sativum HOM05D006777 ORTHO05D008360 1.5e-57 226.1 120 97.5
SalBow8G2353 Salvia bowleyana HOM05D006777 ORTHO05D008360 1.5e-57 226.1 120 97.5
SalBow8G2632 Salvia bowleyana HOM05D006777 ORTHO05D008360 1.5e-57 226.1 120 97.5
Atru.chr4.1633 Acer truncatum HOM05D006777 ORTHO05D008360 2.0e-57 225.7 120 96.7
FvH4_4g13710 Fragaria vesca HOM05D006777 ORTHO05D008360 2.0e-57 225.7 123 95.1
Glyma.05G153800 Glycine max HOM05D006777 ORTHO05D008360 2.0e-57 225.7 120 96.7
Glyma.08G111500 Glycine max HOM05D006777 ORTHO05D008360 2.0e-57 225.7 120 96.7
Aa31LG9G3900 Aethionema arabicum HOM05D006777 ORTHO05D008360 2.6e-57 225.3 120 96.7
MSTRG.4231 Avicennia marina HOM05D006777 ORTHO05D008360 2.6e-57 225.3 120 96.7
Ciclev10006063m.g Citrus clementina HOM05D006777 ORTHO05D008360 2.6e-57 225.3 120 95.8
Dinv38213 Davidia involucrata HOM05D006777 ORTHO05D008360 2.6e-57 225.3 120 96.7
Duzib212G0541 Durio zibethinus HOM05D006777 ORTHO05D008360 2.6e-57 225.3 120 96.7
Duzib268G0333 Durio zibethinus HOM05D006777 ORTHO05D008360 2.6e-57 225.3 120 96.7
Prupe.1G158800 Prunus persica HOM05D006777 ORTHO05D008360 2.6e-57 225.3 120 95.8
RcHm_v2.0_Chr4g0414361 Rosa chinensis HOM05D006777 ORTHO05D008360 2.6e-57 225.3 120 95.8
RcHm_v2.0_Chr7g0213901 Rosa chinensis HOM05D006777 ORTHO05D008360 2.6e-57 225.3 120 95.8
Thecc.04G200300 Theobroma cacao HOM05D006777 ORTHO05D008360 2.6e-57 225.3 120 96.7
BcaC02g09355 Brassica carinata HOM05D006777 ORTHO05D008360 3.4e-57 224.9 120 95.8
Actinidia23410 Actinidia chinensis HOM05D006777 ORTHO05D008360 4.5e-57 224.6 120 96.7
PSO063G4325 Papaver somniferum HOM05D006777 ORTHO05D008360 4.5e-57 224.6 120 95.8
Sopen12g033210 Solanum pennellii HOM05D006777 ORTHO05D008360 4.5e-57 224.6 120 96.7
PGSC0003DMG402004570 Solanum tuberosum HOM05D006777 ORTHO05D008360 4.5e-57 224.6 120 96.7
CsaV3_3G018320 Cucumis sativus L. HOM05D006777 ORTHO05D008360 5.8e-57 224.2 120 95.0
Migut.G00716 Erythranthe guttata HOM05D006777 ORTHO05D008360 5.8e-57 224.2 120 95.8
HanXRQChr01g0022451 Helianthus annuus HOM05D006777 ORTHO05D008360 5.8e-57 224.2 123 94.3
PSO017G6923 Papaver somniferum HOM05D006777 ORTHO05D008360 5.8e-57 224.2 120 95.0
Solyc12g098430.2 Solanum lycopersicum HOM05D006777 ORTHO05D008360 5.8e-57 224.2 120 95.8
THA.LOC104804809 Tarenaya hassleriana HOM05D006777 ORTHO05D008360 5.8e-57 224.2 120 95.8
TWI53G1099 Tripterygium wilfordii HOM05D006777 ORTHO05D008360 5.8e-57 224.2 120 95.0
MELO3C020359.2 Cucumis melo HOM05D006777 ORTHO05D008360 7.6e-57 223.8 120 95.0
CsaV3_2G011130 Cucumis sativus L. HOM05D006777 ORTHO05D008360 7.6e-57 223.8 120 95.0
Medtr8g085290 Medicago truncatula HOM05D006777 ORTHO05D008360 7.6e-57 223.8 120 95.8
Nitab4.5_0000676g0120 Nicotiana tabacum HOM05D006777 ORTHO05D008360 7.6e-57 223.8 120 95.8
THA.LOC104808706 Tarenaya hassleriana HOM05D006777 ORTHO05D008360 7.6e-57 223.8 120 95.8
ATR1147G041 Amborella trichopoda HOM05D006777 ORTHO05D008360 1.0e-56 223.4 120 95.0
BcaB02g08630 Brassica carinata HOM05D006777 ORTHO05D008360 1.0e-56 223.4 120 95.0
DCAR_026626 Daucus carota HOM05D006777 ORTHO05D008360 1.0e-56 223.4 120 95.8
Sc25g0003260 Simmondsia chinensis HOM05D006777 ORTHO05D008360 1.0e-56 223.4 120 95.8
CiPaw.02G065600 Carya illinoinensis HOM05D006777 ORTHO05D008360 1.3e-56 223.0 120 96.7
MELO3C019533.2 Cucumis melo HOM05D006777 ORTHO05D008360 1.3e-56 223.0 120 94.2
Manes.03G146100 Manihot esculenta HOM05D006777 ORTHO05D008360 1.7e-56 222.6 120 94.2
Os03g0848300 Oryza sativa ssp. japonica HOM05D006777 ORTHO05D008360 1.7e-56 222.6 120 95.0
Potri.017G057400 Populus trichocarpa HOM05D006777 ORTHO05D008360 2.9e-56 221.9 123 92.7
Sabra17G0050600 Salix brachista HOM05D006777 ORTHO05D008360 2.9e-56 221.9 123 92.7
PGR083G1334 Punica granatum HOM05D006777 ORTHO05D008360 3.8e-56 221.5 120 94.2
TPR.G11902 Trifolium pratense HOM05D006777 ORTHO05D008360 3.8e-56 221.5 120 95.0
Sp7g12000 Schrenkiella parvula HOM05D006777 ORTHO05D008360 4.9e-56 221.1 120 94.2
HPP92_006972 Vanilla planifolia HOM05D006777 ORTHO05D008360 4.9e-56 221.1 120 94.2
Aqoxy5G00004 Aquilegia oxysepala HOM05D006777 ORTHO05D008360 6.5e-56 220.7 120 93.3
Sed0015167 Sechium edule HOM05D006777 ORTHO05D008360 6.5e-56 220.7 120 93.3
Thhalv10026384m.g Eutrema salsugineum HOM05D006777 ORTHO05D008360 8.4e-56 220.3 120 94.2
AL7G42240 Arabidopsis lyrata HOM05D006777 ORTHO05D008360 1.1e-55 219.9 120 94.2
AT4G14147 Arabidopsis thaliana HOM05D006777 ORTHO05D008360 1.1e-55 219.9 120 94.2
Carub.0007s2827 Capsella rubella HOM05D006777 ORTHO05D008360 1.1e-55 219.9 120 94.2
Gohir.A02G020900 Gossypium hirsutum HOM05D006777 ORTHO05D008360 1.4e-55 219.5 118 94.9
Gohir.D02G024900 Gossypium hirsutum HOM05D006777 ORTHO05D008360 1.4e-55 219.5 118 94.9
Gorai.005G030800 Gossypium raimondii HOM05D006777 ORTHO05D008360 1.4e-55 219.5 118 94.9
Hund11971 Selenicereus undatus HOM05D006777 ORTHO05D008360 1.4e-55 219.5 120 92.5
unitig_37.g12031 Utricularia gibba HOM05D006777 ORTHO05D008360 1.4e-55 219.5 120 93.3
AUR62016205 Chenopodium quinoa HOM05D006777 ORTHO05D008360 1.9e-55 219.2 119 93.3
FAN07G2803 Fragaria x ananassa HOM05D006777 ORTHO05D008360 1.9e-55 219.2 126 92.1
FAN22G2344 Fragaria x ananassa HOM05D006777 ORTHO05D008360 1.9e-55 219.2 129 90.7
arahy.Tifrunner.gnm1.ann1.GXV5N1 Arachis hypogaea HOM05D006777 ORTHO05D008360 1.2e-54 216.5 133 87.2
arahy.Tifrunner.gnm1.ann1.QE6BNJ Arachis hypogaea HOM05D006777 ORTHO05D008360 1.2e-54 216.5 133 87.2
C04p41680 Brassica napus HOM05D006777 ORTHO05D008360 3.5e-54 214.9 120 94.2
A04p08010 Brassica napus HOM05D006777 ORTHO05D008360 1.3e-53 213.0 120 93.3
Mapoly0060s0011 Marchantia polymorpha HOM05D006777 ORTHO05D008360 1.3e-53 213.0 120 89.2
Lalb_Chr12g0205521 Lupinus albus HOM05D006777 ORTHO05D008360 6.7e-53 210.7 122 88.5
SMO146G0157 Selaginella moellendorffii HOM05D006777 ORTHO05D008360 6.7e-53 210.7 118 89.0
Zm00001eb210820 Zea mays HOM05D006777 ORTHO05D008360 6.7e-53 210.7 139 81.3
FAN12G2838 Fragaria x ananassa HOM05D006777 ORTHO05D008360 8.7e-53 210.3 123 91.1
Pp3c3_19880 Physcomitrium patens HOM05D006777 ORTHO05D008360 1.3e-51 206.5 118 87.3
SHI07424 Sapria himalayana HOM05D006777 ORTHO05D008360 2.1e-51 205.7 119 86.6
Eucgr.H02768 Eucalyptus grandis HOM05D006777 ORTHO05D008360 1.4e-50 203.0 107 95.3
Haze_11625 Corylus avellana HOM05D006777 ORTHO05D008360 1.8e-50 202.6 167 70.1
Lsat_1_v5_gn_1_72060 Lactuca sativa HOM05D006777 ORTHO05D008360 1.8e-50 202.6 107 96.3
FAN17G1701 Fragaria x ananassa HOM05D006777 ORTHO05D008360 1.0e-48 196.8 129 84.5
CBR_g4477 Chara braunii HOM05D006777 ORTHO05D008360 3.8e-48 194.9 120 80.0
ClCG06G008050 Citrullus lanatus HOM05D006777 ORTHO05D008360 6.5e-48 194.1 112 90.2
AagrBONN_evm.TU.Sc2ySwM_228.5073 Anthoceros agrestis HOM05D006777 ORTHO05D008360 1.4e-47 193.0 114 86.8
COL.COLO4_20174 Corchorus olitorius HOM05D001598 ORTHO05D002757 4.2e-47 191.4 101 97.0
SGA_v2.0_scaffold14G07057 Striga asiatica HOM05D006777 ORTHO05D008360 7.1e-47 190.7 199 58.3
Lalb_Chr07g0186741 Lupinus albus HOM05D006777 ORTHO05D008360 4.6e-46 188.0 101 95.0
QL06p026356 Quercus lobata HOM05D000003 ORTHO05D008360 3.3e-44 181.8 115 81.7
Peaxi162Scf00652g00116 Petunia axillaris HOM05D006777 ORTHO05D008360 5.7e-44 181.0 95 96.8
Nitab4.5_0000850g0170 Nicotiana tabacum HOM05D006777 ORTHO05D008360 1.6e-43 179.5 95 95.8
SGA_v2.0_scaffold4G02170 Striga asiatica HOM05D006777 ORTHO05D008360 1.1e-42 176.8 95 93.7
Hma1.2p1_0187F.1_g082390 Hydrangea macrophylla HOM05D006777 ORTHO05D008360 4.1e-42 174.9 90 98.9
Nn1g07943 Nelumbo nucifera HOM05D006777 ORTHO05D008360 4.1e-42 174.9 90 97.8
BolC4t25746H Brassica oleracea HOM05D006777 ORTHO05D008360 2.0e-41 172.6 90 96.7
Actinidia35856 Actinidia chinensis HOM05D006777 ORTHO05D008360 4.5e-41 171.4 90 96.7
BraA04t16489Z Brassica rapa HOM05D006777 ORTHO05D008360 7.7e-41 170.6 90 95.6
Dinv27219 Davidia involucrata HOM05D006777 ORTHO05D008360 8.2e-35 150.6 120 73.3
Haze_27630 Corylus avellana HOM05D006777 ORTHO05D008360 3.1e-34 148.7 119 62.2
EL10Ac3g05505 Beta vulgaris HOM05D006777 ORTHO05D008360 6.9e-34 147.5 120 71.7
AUR62039283 Chenopodium quinoa HOM05D006777 ORTHO05D008360 6.9e-34 147.5 119 71.4
CAN.G767.6 Capsicum annuum HOM05D006777 ORTHO05D008360 5.9e-33 144.4 75 96.0
ECA248G0011 Erigeron canadensis HOM05D006777 ORTHO05D008360 1.3e-32 143.3 75 94.7
Cre06.g260800 Chlamydomonas reinhardtii HOM05D006777 ORTHO05D008360 2.6e-25 119.0 108 55.6
Lj3P402T13 Lonicera japonica HOM05D006777 ORTHO05D008360 2.6e-25 119.0 73 79.5
Hma1.2p1_0187F.1_g082380 Hydrangea macrophylla HOM05D006777 ORTHO05D008360 6.5e-24 114.4 60 100.0
Cc00_g31310 Coffea canephora HOM05D006777 ORTHO05D008360 8.5e-24 114.0 69 87.0
CARHR220180 Cardamine hirsuta HOM05D006777 ORTHO05D008360 2.5e-23 112.5 60 98.3
Hund03125 Selenicereus undatus HOM05D006777 ORTHO05D008360 3.7e-19 98.6 95 61.1
vmacro00459 Vaccinium macrocarpon HOM05D006777 ORTHO05D008360 7.7e-17 90.9 90 58.9
Lj3A409T19 Lonicera japonica HOM05D006777 ORTHO05D008360 1.1e-07 60.5 59 61.0


User provided reference genes

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