Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0028556 Camellia sinensis var. sinensis HOM05D007992 ORTHO05D010086 4.7e-31 137.1 64 100.0
QL02p099856 Quercus lobata HOM05D007992 ORTHO05D010086 3.3e-24 114.4 63 84.1
QL93p0310_0002 Quercus lobata HOM05D007992 ORTHO05D010086 3.3e-24 114.4 63 84.1
TWI59G0747 Tripterygium wilfordii HOM05D007992 ORTHO05D010086 1.6e-23 112.1 64 82.8
CiPaw.05G051500 Carya illinoinensis HOM05D007992 ORTHO05D010086 2.1e-23 111.7 64 81.2
Eucgr.I02752 Eucalyptus grandis HOM05D007992 ORTHO05D010086 2.3e-22 108.2 63 79.4
Lj4g0012187 Lotus japonicus HOM05D007992 ORTHO05D010086 2.3e-22 108.2 64 79.7
Potri.003G009800 Populus trichocarpa HOM05D007992 ORTHO05D010086 3.0e-22 107.8 64 81.2
Oeu045939.1 Olea europaea HOM05D007992 ORTHO05D010086 6.8e-22 106.7 64 78.1
PSO782G2589 Papaver somniferum HOM05D007992 ORTHO05D010086 6.8e-22 106.7 62 77.4
Phvul.003G074700 Phaseolus vulgaris HOM05D007992 ORTHO05D010086 6.8e-22 106.7 63 77.8
GSVIVG01023280001 Vitis vinifera HOM05D007992 ORTHO05D010086 1.2e-21 105.9 64 78.1
Glyma.17G000900 Glycine max HOM05D007992 ORTHO05D010086 1.5e-21 105.5 63 77.8
Os12g0182600 Oryza sativa ssp. japonica HOM05D007992 ORTHO05D010086 2.0e-21 105.1 64 75.0
PGR142G0328 Punica granatum HOM05D007992 ORTHO05D010086 2.0e-21 105.1 64 76.6
Zm00001eb138500 Zea mays HOM05D007992 ORTHO05D010086 2.0e-21 105.1 64 76.6
arahy.Tifrunner.gnm1.ann1.5LAZ71 Arachis hypogaea HOM05D007992 ORTHO05D010086 2.6e-21 104.8 64 75.0
arahy.Tifrunner.gnm1.ann1.UKT1PL Arachis hypogaea HOM05D007992 ORTHO05D010086 2.6e-21 104.8 64 75.0
vmacro01727 Vaccinium macrocarpon HOM05D007992 ORTHO05D010086 2.6e-21 104.8 74 70.3
MD15G1432800 Malus domestica HOM05D007992 ORTHO05D010086 4.4e-21 104.0 62 77.4
HanXRQChr07g0187511 Helianthus annuus HOM05D007992 ORTHO05D010086 5.7e-21 103.6 64 73.4
Manes.10G120300 Manihot esculenta HOM05D007992 ORTHO05D010086 7.5e-21 103.2 64 76.6
Sed0016814 Sechium edule HOM05D007992 ORTHO05D010086 1.3e-20 102.4 63 74.6
Lsat_1_v5_gn_7_79260 Lactuca sativa HOM05D007992 ORTHO05D010086 2.9e-20 101.3 64 73.4
CsaV3_3G019300 Cucumis sativus L. HOM05D007992 ORTHO05D010086 3.7e-20 100.9 64 75.0
Migut.B00791 Erythranthe guttata HOM05D007992 ORTHO05D010086 3.7e-20 100.9 64 73.4
Cc02_g22280 Coffea canephora HOM05D007992 ORTHO05D010086 6.4e-20 100.1 64 70.3
Nitab4.5_0000948g0130 Nicotiana tabacum HOM05D007992 ORTHO05D010086 6.4e-20 100.1 63 73.0
Medtr4g134900 Medicago truncatula HOM05D007992 ORTHO05D010086 8.3e-20 99.8 63 71.4
FAN18G3190 Fragaria x ananassa HOM05D007992 ORTHO05D010086 1.1e-19 99.4 58 79.3
RcHm_v2.0_Chr7g0220841 Rosa chinensis HOM05D007992 ORTHO05D010086 1.1e-19 99.4 58 79.3
THA.LOC104820254 Tarenaya hassleriana HOM05D007992 ORTHO05D010086 1.1e-19 99.4 64 71.9
Peaxi162Scf00011g00937 Petunia axillaris HOM05D007992 ORTHO05D010086 1.4e-19 99.0 63 71.4
CAN.G798.45 Capsicum annuum HOM05D007992 ORTHO05D010086 1.8e-19 98.6 63 71.4
MELO3C031671.2 Cucumis melo HOM05D007992 ORTHO05D010086 1.8e-19 98.6 64 75.0
Nitab4.5_0002596g0010 Nicotiana tabacum HOM05D007992 ORTHO05D010086 1.8e-19 98.6 63 71.4
Prupe.1G576700 Prunus persica HOM05D007992 ORTHO05D010086 1.8e-19 98.6 62 75.8
FAN04G0058 Fragaria x ananassa HOM05D007992 ORTHO05D010086 2.4e-19 98.2 58 79.3
CANSAT54G2040 Cannabis sativa HOM05D007992 ORTHO05D010086 7.0e-19 96.7 62 72.6
AUR62023424 Chenopodium quinoa HOM05D007992 ORTHO05D010086 1.2e-18 95.9 60 70.0
DCAR_025353 Daucus carota HOM05D007992 ORTHO05D010086 2.7e-18 94.7 61 73.8
Thhalv10009288m.g Eutrema salsugineum HOM05D007992 ORTHO05D010086 3.5e-18 94.4 64 68.8
AT1G09794 Arabidopsis thaliana HOM05D007992 ORTHO05D010086 7.8e-18 93.2 64 67.2
Carub.0001s0914 Capsella rubella HOM05D007992 ORTHO05D010086 7.8e-18 93.2 64 67.2
CARHR009770 Cardamine hirsuta HOM05D007992 ORTHO05D010086 7.8e-18 93.2 64 67.2
C05p07870 Brassica napus HOM05D007992 ORTHO05D010086 1.7e-17 92.0 64 68.8
BolC5t29538H Brassica oleracea HOM05D007992 ORTHO05D010086 1.7e-17 92.0 64 68.8
EL10Ac1g00780 Beta vulgaris HOM05D007992 ORTHO05D010086 2.3e-17 91.7 60 66.7
Nn5g27747 Nelumbo nucifera HOM05D007992 ORTHO05D010086 2.3e-17 91.7 60 75.0
A06p06460 Brassica napus HOM05D007992 ORTHO05D010086 3.9e-17 90.9 64 67.2
BraA06t23857Z Brassica rapa HOM05D007992 ORTHO05D010086 3.9e-17 90.9 64 67.2
AagrBONN_evm.TU.Sc2ySwM_228.5013 Anthoceros agrestis HOM05D007992 ORTHO05D010086 5.0e-17 90.5 54 72.2
Aa31LG1G5180 Aethionema arabicum HOM05D007992 ORTHO05D010086 8.6e-17 89.7 64 67.2
Aqoxy6G00119 Aquilegia oxysepala HOM05D007992 ORTHO05D010086 2.5e-16 88.2 62 67.7
SalBow7G0224 Salvia bowleyana HOM05D007992 ORTHO05D010086 7.3e-16 86.7 72 59.7
Lalb_Chr13g0304491 Lupinus albus HOM05D007992 ORTHO05D010086 6.2e-15 83.6 60 66.7
Actinidia26161 Actinidia chinensis HOM05D000243 ORTHO05D010086 3.1e-14 81.3 45 80.0
Pp3c6_8240 Physcomitrium patens HOM05D007992 ORTHO05D010086 1.2e-13 79.3 59 59.3
CBR_g44919 Chara braunii HOM05D007992 ORTHO05D010086 2.4e-11 71.6 54 59.3
SMO367G0246 Selaginella moellendorffii HOM05D007992 ORTHO05D010086 5.4e-11 70.5 55 50.9
MD08G1240200 Malus domestica HOM05D007992 ORTHO05D010086 3.5e-10 67.8 59 59.3
Sabra03G0005100 Salix brachista HOM05D007992 ORTHO05D010086 1.0e-09 66.2 36 83.3
Sp1g08390 Schrenkiella parvula HOM05D007992 ORTHO05D010086 1.0e-09 66.2 64 54.7
MBI09_g08443_MAGBIO Magnolia biondii HOM05D007992 ORTHO05D010086 3.3e-08 61.2 63 49.2
Gohir.D04G175400 Gossypium hirsutum HOM05D007992 ORTHO05D010086 1.6e-07 58.9 64 51.6
Gorai.012G166700 Gossypium raimondii HOM05D007992 ORTHO05D010086 1.6e-07 58.9 64 51.6
TPR.G6015 Trifolium pratense HOM05D005420 ORTHO05D006524 1.6e-07 58.9 57 49.1
Rhsim11G0125500 Rhododendron simsii HOM05D007992 ORTHO05D010086 2.1e-07 58.5 32 78.1
Duzib132G0994 Durio zibethinus HOM05D007992 ORTHO05D010086 3.6e-07 57.8 36 75.0
Gohir.A04G130200 Gossypium hirsutum HOM05D007992 ORTHO05D010086 6.2e-07 57.0 36 72.2
Thecc.02G025300 Theobroma cacao HOM05D007992 ORTHO05D010086 8.1e-07 56.6 64 50.0
Atru.chr6.758 Acer truncatum HOM05D007992 ORTHO05D010086 1.8e-06 55.5 64 48.4
CDE02G3423 Ceratophyllum demersum HOM05D007992 ORTHO05D010086 6.8e-06 53.5 37 64.9


User provided reference genes

Program Settings