Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0028542 Camellia sinensis var. sinensis HOM05D002559 ORTHO05D007687 2.4e-65 251.9 119 100.0
CSS0017634 Camellia sinensis var. sinensis HOM05D002559 ORTHO05D007687 6.4e-42 174.1 97 85.6
Hma1.2p1_0124F.1_g058260 Hydrangea macrophylla HOM05D002559 ORTHO05D007687 2.3e-39 165.6 97 79.4
Dinv24051 Davidia involucrata HOM05D002559 ORTHO05D007687 5.1e-39 164.5 98 81.6
Nn7g35948 Nelumbo nucifera HOM05D002559 ORTHO05D007687 1.9e-38 162.5 97 78.4
TAR633G0789 Trochodendron aralioides HOM05D002559 ORTHO05D007687 4.8e-37 157.9 97 76.3
vmacro07884 Vaccinium macrocarpon HOM05D002559 ORTHO05D007687 8.1e-37 157.1 97 74.2
MBI19_g17432_MAGBIO Magnolia biondii HOM05D002559 ORTHO05D007687 3.1e-36 155.2 97 75.3
Manes.08G041600 Manihot esculenta HOM05D002559 ORTHO05D007687 6.9e-36 154.1 97 74.2
Thecc.05G176500 Theobroma cacao HOM05D002559 ORTHO05D007687 1.5e-35 152.9 97 73.2
QL07p024783 Quercus lobata HOM05D002559 ORTHO05D007687 2.0e-35 152.5 98 75.5
Atru.chr8.1168 Acer truncatum HOM05D002559 ORTHO05D007687 2.6e-35 152.1 97 74.2
MD03G1221500 Malus domestica HOM05D002559 ORTHO05D007687 3.4e-35 151.8 97 75.3
Migut.J01857 Erythranthe guttata HOM05D002559 ORTHO05D007687 4.5e-35 151.4 97 74.2
Potri.006G195200 Populus trichocarpa HOM05D002559 ORTHO05D007687 4.5e-35 151.4 97 73.2
Ciclev10012980m.g Citrus clementina HOM05D002559 ORTHO05D007687 5.8e-35 151.0 97 71.1
DCAR_009691 Daucus carota HOM05D002559 ORTHO05D007687 1.0e-34 150.2 97 74.2
Gohir.D10G056100 Gossypium hirsutum HOM05D002559 ORTHO05D007687 1.0e-34 150.2 97 72.2
Phvul.007G261600 Phaseolus vulgaris HOM05D002559 ORTHO05D007687 1.0e-34 150.2 97 72.2
Prupe.7G082900 Prunus persica HOM05D002559 ORTHO05D007687 1.0e-34 150.2 97 73.2
GSVIVG01033456001 Vitis vinifera HOM05D002559 ORTHO05D007687 1.0e-34 150.2 97 70.1
Cfa020135 Carpinus fangiana HOM05D002559 ORTHO05D007687 1.3e-34 149.8 97 74.2
Duzib106G1845 Durio zibethinus HOM05D002559 ORTHO05D007687 1.3e-34 149.8 97 72.2
Oeu046718.1 Olea europaea HOM05D002559 ORTHO05D007687 1.3e-34 149.8 97 72.2
TWI77G0102 Tripterygium wilfordii HOM05D002559 ORTHO05D007687 1.3e-34 149.8 97 72.2
CDE06G1432 Ceratophyllum demersum HOM05D002559 ORTHO05D007687 1.7e-34 149.4 97 73.2
arahy.Tifrunner.gnm1.ann1.90N86S Arachis hypogaea HOM05D002559 ORTHO05D007687 2.2e-34 149.1 107 65.4
CANSAT64G2998 Cannabis sativa HOM05D002559 ORTHO05D007687 2.2e-34 149.1 97 74.2
Hund24818 Selenicereus undatus HOM05D002559 ORTHO05D007687 2.2e-34 149.1 98 73.5
EL10Ac3g06871 Beta vulgaris HOM05D002559 ORTHO05D007687 2.9e-34 148.7 98 73.5
THA.LOC104820386 Tarenaya hassleriana HOM05D002559 ORTHO05D007687 2.9e-34 148.7 97 72.2
FvH4_6g21750 Fragaria vesca HOM05D002559 ORTHO05D007687 3.8e-34 148.3 97 73.2
FAN02G0508 Fragaria x ananassa HOM05D002559 ORTHO05D007687 3.8e-34 148.3 97 73.2
FAN05G1828 Fragaria x ananassa HOM05D002559 ORTHO05D007687 3.8e-34 148.3 97 73.2
FAN14G3509 Fragaria x ananassa HOM05D002559 ORTHO05D007687 3.8e-34 148.3 97 73.2
Gohir.A04G053100 Gossypium hirsutum HOM05D002559 ORTHO05D007687 3.8e-34 148.3 97 71.1
Gohir.D10G055600 Gossypium hirsutum HOM05D002559 ORTHO05D007687 3.8e-34 148.3 97 71.1
MD11G1239000 Malus domestica HOM05D002559 ORTHO05D007687 3.8e-34 148.3 97 73.2
RcHm_v2.0_Chr3g0479091 Rosa chinensis HOM05D002559 ORTHO05D007687 3.8e-34 148.3 97 73.2
Lsat_1_v5_gn_2_56540 Lactuca sativa HOM05D002559 ORTHO05D007687 4.9e-34 147.9 97 70.1
Solyc01g099730.3 Solanum lycopersicum HOM05D002559 ORTHO05D007687 4.9e-34 147.9 97 72.2
Cc06_g15580 Coffea canephora HOM05D002559 ORTHO05D007687 6.5e-34 147.5 98 73.5
Haze_20033 Corylus avellana HOM05D002559 ORTHO05D007687 6.5e-34 147.5 97 72.2
Sopen01g043250 Solanum pennellii HOM05D002559 ORTHO05D007687 6.5e-34 147.5 97 72.2
arahy.Tifrunner.gnm1.ann1.75K7CQ Arachis hypogaea HOM05D002559 ORTHO05D007687 8.4e-34 147.1 107 64.5
Aqoxy7G00622 Aquilegia oxysepala HOM05D002559 ORTHO05D007687 1.1e-33 146.7 97 68.0
SGA_v2.0_scaffold13G06362 Striga asiatica HOM05D002559 ORTHO05D007687 1.1e-33 146.7 97 70.1
CiPaw.10G024700 Carya illinoinensis HOM05D002559 ORTHO05D007687 1.4e-33 146.4 97 71.1
Solyc09g065930.4 Solanum lycopersicum HOM05D002559 ORTHO05D007687 1.4e-33 146.4 97 71.1
Sopen09g027720 Solanum pennellii HOM05D002559 ORTHO05D007687 1.9e-33 146.0 97 71.1
PGSC0003DMG400007534 Solanum tuberosum HOM05D002559 ORTHO05D007687 1.9e-33 146.0 97 71.1
PGSC0003DMG400011423 Solanum tuberosum HOM05D002559 ORTHO05D007687 1.9e-33 146.0 97 71.1
HanXRQChr14g0438201 Helianthus annuus HOM05D002559 ORTHO05D007687 2.5e-33 145.6 97 68.0
Lj5g0004649 Lotus japonicus HOM05D002559 ORTHO05D007687 3.2e-33 145.2 97 70.1
PGR142G0770 Punica granatum HOM05D002559 ORTHO05D007687 3.2e-33 145.2 97 69.1
Sabra06G0149900 Salix brachista HOM05D002559 ORTHO05D007687 3.2e-33 145.2 97 71.1
SGA_v2.0_scaffold72G24089 Striga asiatica HOM05D002559 ORTHO05D007687 3.2e-33 145.2 97 69.1
Manes.09G039000 Manihot esculenta HOM05D002559 ORTHO05D007687 4.2e-33 144.8 97 70.1
Duzib093G2249 Durio zibethinus HOM05D002559 ORTHO05D007687 5.5e-33 144.4 97 71.1
Glyma.09G107200 Glycine max HOM05D002559 ORTHO05D007687 5.5e-33 144.4 97 69.1
Psat6g090120 Pisum sativum HOM05D002559 ORTHO05D007687 5.5e-33 144.4 97 68.0
MSTRG.6495 Avicennia marina HOM05D002559 ORTHO05D007687 9.3e-33 143.7 97 68.0
Ca_12016_v3 Cicer arietinum L. HOM05D002559 ORTHO05D007687 9.3e-33 143.7 97 69.1
Eucgr.A02392 Eucalyptus grandis HOM05D002559 ORTHO05D007687 1.2e-32 143.3 97 68.0
Glyma.02G170300 Glycine max HOM05D002559 ORTHO05D007687 1.2e-32 143.3 97 69.1
TPR.G27694 Trifolium pratense HOM05D002559 ORTHO05D007687 1.6e-32 142.9 97 66.0
Lalb_Chr21g0316101 Lupinus albus HOM05D002559 ORTHO05D007687 2.1e-32 142.5 97 69.1
ClCG10G017720 Citrullus lanatus HOM05D002559 ORTHO05D007687 2.7e-32 142.1 97 66.0
Gohir.D04G090700 Gossypium hirsutum HOM05D002559 ORTHO05D007687 2.7e-32 142.1 97 68.0
PGSC0003DMG400024714 Solanum tuberosum HOM05D002559 ORTHO05D007687 3.5e-32 141.7 98 70.4
ATR0598G195 Amborella trichopoda HOM05D002559 ORTHO05D007687 4.6e-32 141.4 97 68.0
Gorai.011G059300 Gossypium raimondii HOM05D002559 ORTHO05D007687 4.6e-32 141.4 112 60.7
THA.LOC104824485 Tarenaya hassleriana HOM05D002559 ORTHO05D007687 4.6e-32 141.4 101 67.3
Medtr1g054455 Medicago truncatula HOM05D002559 ORTHO05D007687 6.0e-32 141.0 97 64.9
A04p31940 Brassica napus HOM05D002559 ORTHO05D007687 7.9e-32 140.6 97 70.1
Gorai.009G391600 Gossypium raimondii HOM05D002559 ORTHO05D007687 1.3e-31 139.8 88 73.9
Carub.0004s2427 Capsella rubella HOM05D002559 ORTHO05D007687 1.8e-31 139.4 97 69.1
Sp4g24210 Schrenkiella parvula HOM05D002559 ORTHO05D007687 1.8e-31 139.4 97 69.1
VMungo0720G2494 Vigna mungo HOM05D002559 ORTHO05D007687 1.8e-31 139.4 97 69.1
ECA238G4539 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.3e-31 139.0 97 67.0
AT2G41945 Arabidopsis thaliana HOM05D002559 ORTHO05D007687 3.0e-31 138.7 97 68.0
Thhalv10017359m.g Eutrema salsugineum HOM05D002559 ORTHO05D007687 3.0e-31 138.7 97 68.0
AL4G40300 Arabidopsis lyrata HOM05D002559 ORTHO05D007687 3.9e-31 138.3 97 68.0
Zm00001eb278760 Zea mays HOM05D002559 ORTHO05D007687 3.9e-31 138.3 98 69.4
Sed0011167 Sechium edule HOM05D002559 ORTHO05D007687 5.1e-31 137.9 97 63.9
Aa31LG1G24190 Aethionema arabicum HOM05D002559 ORTHO05D007687 8.7e-31 137.1 97 69.1
CARHR137050 Cardamine hirsuta HOM05D002559 ORTHO05D007687 1.1e-30 136.7 97 67.0
AUR62012012 Chenopodium quinoa HOM05D002559 ORTHO05D007687 1.5e-30 136.3 98 69.4
Sc19g0006130 Simmondsia chinensis HOM05D002559 ORTHO05D007687 1.9e-30 136.0 99 66.7
MELO3C009602.2 Cucumis melo HOM05D002559 ORTHO05D007687 2.5e-30 135.6 97 61.9
Os06g0206200 Oryza sativa ssp. japonica HOM05D002559 ORTHO05D007687 2.5e-30 135.6 99 69.7
BcaB01g03428 Brassica carinata HOM05D002559 ORTHO05D007687 4.3e-30 134.8 97 67.0
AUR62015325 Chenopodium quinoa HOM05D002559 ORTHO05D007687 4.3e-30 134.8 98 68.4
BcaB06g29220 Brassica carinata HOM05D002559 ORTHO05D007687 9.6e-30 133.7 98 68.4
BcaC01g05317 Brassica carinata HOM05D002559 ORTHO05D007687 2.1e-29 132.5 97 66.0
BolC4t28443H Brassica oleracea HOM05D002559 ORTHO05D007687 2.8e-29 132.1 97 67.0
BraA04t18652Z Brassica rapa HOM05D002559 ORTHO05D007687 2.8e-29 132.1 97 67.0
A03p23490 Brassica napus HOM05D002559 ORTHO05D007687 4.8e-29 131.3 97 64.9
BraA03t11565Z Brassica rapa HOM05D002559 ORTHO05D007687 4.8e-29 131.3 97 64.9
COL.COLO4_29373 Corchorus olitorius HOM05D002559 ORTHO05D007687 4.8e-29 131.3 131 50.4
BcaC02g07270 Brassica carinata HOM05D002559 ORTHO05D007687 1.8e-28 129.4 97 66.0
C03p28020 Brassica napus HOM05D002559 ORTHO05D007687 1.8e-28 129.4 97 64.9
Nitab4.5_0000358g0040 Nicotiana tabacum HOM05D002559 ORTHO05D007687 3.1e-28 128.6 97 66.0
Nitab4.5_0000698g0050 Nicotiana tabacum HOM05D002559 ORTHO05D007687 3.1e-28 128.6 97 66.0
BolC3t15172H Brassica oleracea HOM05D002559 ORTHO05D007687 5.3e-28 127.9 96 65.6
HPP92_003743 Vanilla planifolia HOM05D002559 ORTHO05D007687 1.2e-27 126.7 97 64.9
CsaV3_3G038570 Cucumis sativus L. HOM05D002559 ORTHO05D007687 4.5e-27 124.8 120 51.7
DCAR_019859 Daucus carota HOM05D002559 ORTHO05D007687 2.9e-26 122.1 125 53.6
Peaxi162Scf00003g04617 Petunia axillaris HOM05D002559 ORTHO05D007687 5.0e-26 121.3 79 72.2
unitig_0.g526 Utricularia gibba HOM05D002559 ORTHO05D007687 2.5e-25 119.0 111 54.1
PSO170G0150 Papaver somniferum HOM05D002559 ORTHO05D007687 3.2e-25 118.6 97 58.8
Actinidia32412 Actinidia chinensis HOM05D002559 ORTHO05D007687 7.2e-25 117.5 97 62.9
PSO528G0113 Papaver somniferum HOM05D002559 ORTHO05D007687 3.5e-24 115.2 97 57.7
RcHm_v2.0_Chr7g0223201 Rosa chinensis HOM05D002559 ORTHO05D007687 6.7e-23 110.9 97 60.8
Rhsim03G0003900 Rhododendron simsii HOM05D002559 ORTHO05D007687 1.6e-21 106.3 178 38.8
Gorai.011G059800 Gossypium raimondii HOM05D002559 ORTHO05D007687 5.3e-20 101.3 57 78.9
TWI53G0051 Tripterygium wilfordii HOM05D002559 ORTHO05D007687 1.7e-18 96.3 96 50.0
C04p69410 Brassica napus HOM05D002559 ORTHO05D007687 2.2e-18 95.9 61 72.1
Peaxi162Scf00363g00821 Petunia axillaris HOM05D002559 ORTHO05D007687 5.0e-18 94.7 57 73.7
SGA_v2.0_scaffold105G30503 Striga asiatica HOM05D002559 ORTHO05D007687 1.4e-15 86.7 79 55.7
Actinidia22059 Actinidia chinensis HOM05D002559 ORTHO05D007687 6.7e-15 84.3 57 71.9
Mapoly0006s0258 Marchantia polymorpha HOM05D002559 ORTHO05D007057 2.8e-13 79.0 90 38.9
CiPaw.09G027600 Carya illinoinensis HOM05D002559 ORTHO05D007687 5.3e-12 74.7 41 78.0
Dinv16352 Davidia involucrata HOM05D002559 ORTHO05D007687 2.0e-11 72.8 44 77.3
Pp3c26_10970 Physcomitrium patens HOM05D002559 ORTHO05D007057 4.5e-11 71.6 98 35.7
Lsat_1_v5_gn_6_36260 Lactuca sativa HOM05D002559 ORTHO05D007687 3.2e-09 65.5 38 73.7
Pp3c4_24240 Physcomitrium patens HOM05D002559 ORTHO05D007057 2.7e-08 62.4 76 38.2
MELO3C034945.2 Cucumis melo HOM05D002559 ORTHO05D007057 7.4e-06 54.3 69 36.2


User provided reference genes

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