Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0008627 Camellia sinensis var. sinensis HOM05D011276 ORTHO05D013043 2.8e-39 164.9 86 100.0
CSS0028529 Camellia sinensis var. sinensis HOM05D011276 ORTHO05D013043 2.8e-39 164.9 86 100.0
CSS0020802 Camellia sinensis var. sinensis HOM05D011276 ORTHO05D013043 4.4e-32 141.0 85 85.9
CSS0039481 Camellia sinensis var. sinensis HOM05D011276 ORTHO05D013043 1.1e-27 126.3 85 82.4
CSS0002432 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 6.1e-26 120.6 112 63.4
CSS0019150 Camellia sinensis var. sinensis HOM05D000936 ORTHO05D005107 2.9e-20 101.7 85 67.1
CSS0038420 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.8e-20 101.3 101 59.4
CSS0030944 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.7e-13 77.0 75 56.0
CSS0015818 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.0e-12 76.6 63 63.5
CSS0006946 Camellia sinensis var. sinensis HOM05D011276 ORTHO05D013043 1.5e-11 72.8 85 54.1
CAN.G27.28 Capsicum annuum HOM05D005075 ORTHO05D007097 2.1e-10 68.9 78 42.3
CSS0005907 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 2.3e-09 65.5 84 48.8
Oeu026778.1 Olea europaea HOM05D000002 ORTHO05D000001 2.6e-08 62.0 105 35.2
CSS0030070 Camellia sinensis var. sinensis HOM05D011276 ORTHO05D013043 3.4e-08 61.6 77 46.8
TAR332G0002 Trochodendron aralioides HOM05D000002 ORTHO05D000001 4.4e-08 61.2 102 36.3
CSS0031115 Camellia sinensis var. sinensis HOM05D011276 ORTHO05D013043 1.7e-07 59.3 62 58.1
CSS0048496 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 2.2e-07 58.9 47 63.8
SHI20719 Sapria himalayana HOM05D000002 ORTHO05D000001 3.7e-07 58.2 81 43.2
QL02p002557 Quercus lobata HOM05D000002 ORTHO05D000001 4.9e-07 57.8 106 35.8
QL12p040299 Quercus lobata HOM05D000002 ORTHO05D000001 4.9e-07 57.8 106 35.8
CSS0027002 Camellia sinensis var. sinensis HOM05D011276 ORTHO05D013043 1.8e-06 55.8 85 44.7
SHI26071 Sapria himalayana HOM05D000002 ORTHO05D009886 1.8e-06 55.8 77 42.9
CSS0037636 Camellia sinensis var. sinensis HOM05D011157 ORTHO05D013820 2.4e-06 55.5 75 45.3
Oeu028933.2 Olea europaea HOM05D000002 ORTHO05D000001 2.4e-06 55.5 103 35.0
CSS0050489 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.1e-06 54.7 52 50.0
ClCG09G007490 Citrullus lanatus HOM05D000002 ORTHO05D000001 4.1e-06 54.7 110 32.7
Oeu030761.1 Olea europaea HOM05D000164 ORTHO05D000096 4.1e-06 54.7 51 56.9
SHI04754 Sapria himalayana HOM05D000002 ORTHO05D000001 4.1e-06 54.7 108 33.3
SHI27171 Sapria himalayana HOM05D000002 ORTHO05D000001 4.1e-06 54.7 108 34.3
CSS0046737 Camellia sinensis var. sinensis HOM05D011276 ORTHO05D013043 7.0e-06 53.9 84 41.7


User provided reference genes

Program Settings