Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0028509 Camellia sinensis var. sinensis HOM05D006363 ORTHO05D007920 2.3e-100 369.0 204 100.0
CSS0002932 Camellia sinensis var. sinensis HOM05D006363 ORTHO05D007920 4.4e-99 364.8 204 99.5
vmacro09843 Vaccinium macrocarpon HOM05D006363 ORTHO05D007920 2.5e-78 295.8 196 78.6
Rhsim09G0197500 Rhododendron simsii HOM05D006363 ORTHO05D007920 4.3e-78 295.0 196 78.6
Dinv28459 Davidia involucrata HOM05D006363 ORTHO05D007920 2.4e-76 289.3 208 75.0
AUR62021214 Chenopodium quinoa HOM05D006363 ORTHO05D007920 9.9e-75 283.9 201 72.1
Ciclev10007013m.g Citrus clementina HOM05D006363 ORTHO05D007920 9.9e-75 283.9 205 72.2
EL10Ac3g05667 Beta vulgaris HOM05D006363 ORTHO05D007920 3.8e-74 282.0 194 73.2
AUR62016007 Chenopodium quinoa HOM05D006363 ORTHO05D007920 3.8e-74 282.0 193 74.1
Lj8C25T12 Lonicera japonica HOM05D006363 ORTHO05D007920 4.9e-74 281.6 196 76.5
Thecc.03G174500 Theobroma cacao HOM05D006363 ORTHO05D007920 1.9e-73 279.6 198 73.2
Migut.F01133 Erythranthe guttata HOM05D006363 ORTHO05D007920 5.4e-73 278.1 203 72.4
Sed0019375 Sechium edule HOM05D006363 ORTHO05D007920 5.4e-73 278.1 200 74.0
COL.COLO4_14288 Corchorus olitorius HOM05D006363 ORTHO05D007920 1.6e-72 276.6 196 74.0
Oeu062762.2 Olea europaea HOM05D006363 ORTHO05D007920 2.7e-72 275.8 206 70.9
QL09p014582 Quercus lobata HOM05D006363 ORTHO05D007920 3.5e-72 275.4 198 71.2
Duzib205G1779 Durio zibethinus HOM05D006363 ORTHO05D007920 4.6e-72 275.0 193 73.6
FvH4_7g29240 Fragaria vesca HOM05D006363 ORTHO05D007920 4.6e-72 275.0 206 70.9
FAN06G3284 Fragaria x ananassa HOM05D006363 ORTHO05D007920 4.6e-72 275.0 206 70.9
FAN06G3928 Fragaria x ananassa HOM05D006363 ORTHO05D007920 4.6e-72 275.0 206 70.9
FAN10G0438 Fragaria x ananassa HOM05D006363 ORTHO05D007920 4.6e-72 275.0 206 70.9
Gohir.A12G258900 Gossypium hirsutum HOM05D006363 ORTHO05D007920 6.0e-72 274.6 196 73.0
MELO3C006895.2 Cucumis melo HOM05D006363 ORTHO05D007920 7.8e-72 274.2 196 73.0
Atru.chr1.482 Acer truncatum HOM05D006363 ORTHO05D007920 1.7e-71 273.1 198 73.2
CsaV3_3G016980 Cucumis sativus L. HOM05D006363 ORTHO05D007920 1.7e-71 273.1 196 71.9
Gorai.008G278600 Gossypium raimondii HOM05D006363 ORTHO05D007920 1.7e-71 273.1 196 72.4
Thhalv10015742m.g Eutrema salsugineum HOM05D006363 ORTHO05D007920 3.0e-71 272.3 205 70.7
HanXRQChr14g0462221 Helianthus annuus HOM05D006363 ORTHO05D007920 3.0e-71 272.3 204 71.1
Gohir.D12G260100 Gossypium hirsutum HOM05D006363 ORTHO05D007920 3.9e-71 271.9 196 71.9
MSTRG.8448 Avicennia marina HOM05D006363 ORTHO05D007920 5.1e-71 271.6 204 71.1
Cc03_g13850 Coffea canephora HOM05D006363 ORTHO05D007920 6.6e-71 271.2 198 73.7
Peaxi162Scf00915g00018 Petunia axillaris HOM05D006363 ORTHO05D007920 6.6e-71 271.2 204 69.1
RcHm_v2.0_Chr1g0376991 Rosa chinensis HOM05D006363 ORTHO05D007920 8.7e-71 270.8 204 69.1
Lsat_1_v5_gn_2_133820 Lactuca sativa HOM05D006363 ORTHO05D007920 1.1e-70 270.4 205 71.7
Nn6g34197 Nelumbo nucifera HOM05D006363 ORTHO05D007920 1.1e-70 270.4 200 72.5
Nitab4.5_0001508g0030 Nicotiana tabacum HOM05D006363 ORTHO05D007920 1.9e-70 269.6 204 70.6
Psat6g200600 Pisum sativum HOM05D006363 ORTHO05D007920 1.9e-70 269.6 197 71.6
Ah.13g075440 Amaranthus hybridus HOM05D006363 ORTHO05D007920 2.5e-70 269.2 191 72.3
FAN03G1027 Fragaria x ananassa HOM05D006363 ORTHO05D007920 2.5e-70 269.2 206 69.4
THA.LOC104811988 Tarenaya hassleriana HOM05D006363 ORTHO05D007920 3.3e-70 268.9 205 70.2
MD01G1199000 Malus domestica HOM05D006363 ORTHO05D007920 7.3e-70 267.7 197 70.1
ECA238G0548 Erigeron canadensis HOM05D006363 ORTHO05D007920 9.6e-70 267.3 200 72.0
GSVIVG01010552001 Vitis vinifera HOM05D006363 ORTHO05D007920 9.6e-70 267.3 199 71.9
Glyma.20G157100 Glycine max HOM05D006363 ORTHO05D007920 1.3e-69 266.9 205 67.8
MD07G1266800 Malus domestica HOM05D006363 ORTHO05D007920 1.3e-69 266.9 197 71.6
Nitab4.5_0000716g0210 Nicotiana tabacum HOM05D006363 ORTHO05D007920 1.3e-69 266.9 204 70.1
Ca_10782_v3 Cicer arietinum L. HOM05D006363 ORTHO05D007920 2.1e-69 266.2 197 68.5
TWI39G0139 Tripterygium wilfordii HOM05D006363 ORTHO05D007920 2.8e-69 265.8 199 68.8
CARHR265110 Cardamine hirsuta HOM05D006363 ORTHO05D007920 3.6e-69 265.4 207 70.0
Sabra15G0151200 Salix brachista HOM05D006363 ORTHO05D007920 3.6e-69 265.4 200 68.5
Prupe.2G292400 Prunus persica HOM05D006363 ORTHO05D007920 4.8e-69 265.0 205 68.3
Cfa008303 Carpinus fangiana HOM05D006363 ORTHO05D007920 6.2e-69 264.6 197 68.0
Haze_13734 Corylus avellana HOM05D006363 ORTHO05D007920 6.2e-69 264.6 197 68.5
PGR042G3170 Punica granatum HOM05D006363 ORTHO05D007920 6.2e-69 264.6 199 69.3
TPR.G14326 Trifolium pratense HOM05D006363 ORTHO05D007920 8.1e-69 264.2 197 69.0
BcaB01g04190 Brassica carinata HOM05D006363 ORTHO05D007920 1.8e-68 263.1 205 68.3
Phvul.007G068100 Phaseolus vulgaris HOM05D006363 ORTHO05D007920 1.8e-68 263.1 194 69.1
VMungo0720G1872 Vigna mungo HOM05D006363 ORTHO05D007920 4.0e-68 261.9 196 67.9
CiPaw.03G104700 Carya illinoinensis HOM05D006363 ORTHO05D007920 9.0e-68 260.8 197 69.0
FAN03G1282 Fragaria x ananassa HOM05D006363 ORTHO05D007920 1.5e-67 260.0 206 68.4
Glyma.10G237500 Glycine max HOM05D006363 ORTHO05D007920 1.5e-67 260.0 206 66.0
Manes.07G111200 Manihot esculenta HOM05D006363 ORTHO05D007920 1.5e-67 260.0 197 69.5
PGSC0003DMG400014325 Solanum tuberosum HOM05D006363 ORTHO05D007920 1.5e-67 260.0 204 68.6
BraA03t10870Z Brassica rapa HOM05D006363 ORTHO05D007920 2.6e-67 259.2 205 67.3
Medtr1g100753 Medicago truncatula HOM05D006363 ORTHO05D007920 2.6e-67 259.2 197 67.0
BcaC01g06171 Brassica carinata HOM05D006363 ORTHO05D007920 3.4e-67 258.8 205 67.3
Carub.0008s1228 Capsella rubella HOM05D006363 ORTHO05D007920 3.4e-67 258.8 206 67.5
Solyc03g025990.1 Solanum lycopersicum HOM05D006363 ORTHO05D007920 4.4e-67 258.5 205 69.8
Sp6g14440 Schrenkiella parvula HOM05D006363 ORTHO05D007920 9.9e-67 257.3 207 66.7
Sopen03g004810 Solanum pennellii HOM05D006363 ORTHO05D007920 9.9e-67 257.3 205 68.8
LjContig00238g0019616 Lotus japonicus HOM05D006363 ORTHO05D007920 1.3e-66 256.9 207 65.2
BolC3t14244H Brassica oleracea HOM05D006363 ORTHO05D007920 1.7e-66 256.5 205 66.3
unitig_60.g25545 Utricularia gibba HOM05D006363 ORTHO05D007920 2.2e-66 256.1 193 70.5
AL8G26570 Arabidopsis lyrata HOM05D006363 ORTHO05D007920 2.9e-66 255.8 201 68.2
Cpa.g.sc107.33 Carica papaya HOM05D006363 ORTHO05D007920 2.9e-66 255.8 200 66.5
C03p18470 Brassica napus HOM05D006363 ORTHO05D007920 3.8e-66 255.4 205 66.3
DCAR_018188 Daucus carota HOM05D006363 ORTHO05D007920 3.8e-66 255.4 204 63.2
Aqoxy7G00395 Aquilegia oxysepala HOM05D006363 ORTHO05D007920 4.9e-66 255.0 209 64.6
AT5G52190 Arabidopsis thaliana HOM05D006363 ORTHO05D007920 6.4e-66 254.6 209 65.6
Eucgr.A02801 Eucalyptus grandis HOM05D006363 ORTHO05D007920 6.4e-66 254.6 207 67.6
Potri.015G140600 Populus trichocarpa HOM05D006363 ORTHO05D007920 1.9e-65 253.1 199 65.8
Lalb_Chr02g0140961 Lupinus albus HOM05D006363 ORTHO05D007920 2.1e-64 249.6 194 66.0
PSO782G5704 Papaver somniferum HOM05D006363 ORTHO05D007920 6.0e-64 248.1 215 64.7
TAR375G0304 Trochodendron aralioides HOM05D006363 ORTHO05D007920 1.0e-63 247.3 183 73.2
Aa31LG3G8570 Aethionema arabicum HOM05D006363 ORTHO05D007920 3.0e-63 245.7 197 66.5
CAN.G947.11 Capsicum annuum HOM05D006363 ORTHO05D007920 5.1e-63 245.0 197 69.0
CANSAT21G2254 Cannabis sativa HOM05D006363 ORTHO05D007920 8.7e-63 244.2 197 66.0
CANSAT21G0627 Cannabis sativa HOM05D006363 ORTHO05D007920 4.3e-62 241.9 197 66.5
PSO478G1739 Papaver somniferum HOM05D006363 ORTHO05D007920 2.1e-61 239.6 214 62.6
MBI04_g04731_MAGBIO Magnolia biondii HOM05D006363 ORTHO05D007920 1.4e-60 236.9 202 64.9
Zm00001eb428810 Zea mays HOM05D006363 ORTHO05D007920 3.9e-55 218.8 201 62.2
Os04g0568600 Oryza sativa ssp. japonica HOM05D006363 ORTHO05D007920 1.5e-54 216.9 193 60.6
CDE04G1845 Ceratophyllum demersum HOM05D006363 ORTHO05D007920 2.1e-53 213.0 178 65.7
HPP92_021110 Vanilla planifolia HOM05D006363 ORTHO05D007920 2.0e-51 206.5 177 63.3
Sc25g0000440 Simmondsia chinensis HOM05D006363 ORTHO05D007920 8.4e-50 201.1 150 72.0
FAN01G1422 Fragaria x ananassa HOM05D006363 ORTHO05D007920 1.4e-49 200.3 206 56.8
ATR0757G111 Amborella trichopoda HOM05D006363 ORTHO05D007920 2.5e-49 199.5 203 56.2
A03p15800 Brassica napus HOM05D006363 ORTHO05D007920 1.2e-48 197.2 143 72.0
SalBow2G2214 Salvia bowleyana HOM05D006363 ORTHO05D007920 1.6e-45 186.8 151 66.9
SEGI_31787 Sequoiadendron giganteum HOM05D006363 ORTHO05D007920 1.7e-42 176.8 202 49.5
SMO367G0077 Selaginella moellendorffii HOM05D006363 ORTHO05D007920 1.8e-39 166.8 170 58.2
Pp3c6_24270 Physcomitrium patens HOM05D006363 ORTHO05D007920 1.6e-37 160.2 209 45.9
A08p37210 Brassica napus HOM05D006363 ORTHO05D007920 5.9e-35 151.8 122 63.9
BcaC01g06168 Brassica carinata HOM05D006363 ORTHO05D007920 2.5e-25 119.8 100 65.0
BcaC06g36545 Brassica carinata HOM05D006363 ORTHO05D007920 1.8e-23 113.6 86 67.4
Mapoly0047s0087 Marchantia polymorpha HOM05D006363 ORTHO05D007920 1.3e-21 107.5 146 47.3
TAR633G0106 Trochodendron aralioides HOM05D006363 ORTHO05D007920 1.2e-19 100.9 71 70.4
TAR291G0005 Trochodendron aralioides HOM05D006363 ORTHO05D007920 2.9e-18 96.3 70 70.0
TAR375G0495 Trochodendron aralioides HOM05D006363 ORTHO05D007920 2.9e-18 96.3 70 70.0
TAR624G1193 Trochodendron aralioides HOM05D006363 ORTHO05D007920 2.9e-18 96.3 70 70.0
TAR614G0003 Trochodendron aralioides HOM05D006363 ORTHO05D007920 1.9e-17 93.6 70 68.6
TAR629G0450 Trochodendron aralioides HOM05D006363 ORTHO05D007920 2.5e-17 93.2 70 68.6
Pp3c17_12800 Physcomitrium patens HOM05D006363 ORTHO05D007920 4.2e-17 92.4 145 43.4
TAR383G0849 Trochodendron aralioides HOM05D003653 ORTHO05D004249 4.2e-17 92.4 70 67.1
TAR633G1276 Trochodendron aralioides HOM05D006363 ORTHO05D007920 4.2e-17 92.4 70 67.1
BolC5t32613H Brassica oleracea HOM05D006363 ORTHO05D007920 3.6e-16 89.4 97 53.6
Actinidia03116 Actinidia chinensis HOM05D006363 ORTHO05D007920 6.1e-16 88.6 107 52.3
C05p38730 Brassica napus HOM05D006363 ORTHO05D007920 1.4e-15 87.4 97 52.6
TPR.G33086 Trifolium pratense HOM05D006363 ORTHO05D007920 2.4e-12 76.6 60 68.3
BcaC01g06167 Brassica carinata HOM05D006363 ORTHO05D007920 1.6e-11 73.9 43 83.7
BcaC05g27871 Brassica carinata HOM05D006363 ORTHO05D007920 6.5e-10 68.6 103 47.6
Nitab4.5_0006622g0070 Nicotiana tabacum HOM05D006363 ORTHO05D007920 1.5e-06 57.4 31 87.1


User provided reference genes

Program Settings