Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0028488 Camellia sinensis var. sinensis HOM05D009510 ORTHO05D010335 9.9e-89 330.1 168 100.0
Dinv21618 Davidia involucrata HOM05D009510 ORTHO05D010335 5.0e-16 88.6 144 43.1
Dinv39126 Davidia involucrata HOM05D009510 ORTHO05D010335 1.8e-13 80.1 146 41.8
GSVIVG01001306001 Vitis vinifera HOM05D009510 ORTHO05D010335 4.4e-12 75.5 146 42.5
vmacro00232 Vaccinium macrocarpon HOM05D009510 ORTHO05D010335 7.5e-12 74.7 130 43.1
Potri.001G122600 Populus trichocarpa HOM05D009510 ORTHO05D010335 9.8e-12 74.3 145 38.6
Hma1.2p1_0753F.1_g212990 Hydrangea macrophylla HOM05D009510 ORTHO05D010335 1.8e-10 70.1 149 40.3
Migut.A00962 Erythranthe guttata HOM05D012984 ORTHO05D010335 9.2e-10 67.8 58 58.6
Sabra01G0094500 Salix brachista HOM05D009510 ORTHO05D010335 1.6e-09 67.0 186 33.3
Prupe.5G072500 Prunus persica HOM05D015618 ORTHO05D010335 2.7e-09 66.2 131 35.9
Haze_07883 Corylus avellana HOM05D009510 ORTHO05D010335 3.5e-09 65.9 44 75.0
Ciclev10022879m.g Citrus clementina HOM05D009510 ORTHO05D010335 1.0e-08 64.3 54 66.7
HanXRQChr03g0088641 Helianthus annuus HOM05D012984 ORTHO05D010335 1.3e-08 63.9 58 53.4
Nitab4.5_0000312g0200 Nicotiana tabacum HOM05D012984 ORTHO05D010335 3.0e-08 62.8 101 45.5
Nitab4.5_0002727g0010 Nicotiana tabacum HOM05D012984 ORTHO05D010335 3.9e-08 62.4 92 44.6
Atru.chr9.1339 Acer truncatum HOM05D009510 ORTHO05D010335 5.0e-08 62.0 159 32.1
Cfa012745 Carpinus fangiana HOM05D009510 ORTHO05D010335 5.0e-08 62.0 142 38.0
ECA240G2875 Erigeron canadensis HOM05D012984 ORTHO05D010335 1.5e-07 60.5 100 37.0
CAN.G1218.11 Capsicum annuum HOM05D012984 ORTHO05D010335 3.3e-07 59.3 105 39.0
DCAR_004946 Daucus carota HOM05D012984 ORTHO05D010335 4.3e-07 58.9 78 43.6
DCAR_027783 Daucus carota HOM05D009510 ORTHO05D010335 4.3e-07 58.9 75 49.3
Gohir.D08G190400 Gossypium hirsutum HOM05D009510 ORTHO05D010335 5.6e-07 58.5 76 47.4
Lsat_1_v5_gn_6_91520 Lactuca sativa HOM05D012984 ORTHO05D010335 5.6e-07 58.5 70 45.7
Gorai.004G200500 Gossypium raimondii HOM05D009510 ORTHO05D010335 7.3e-07 58.2 118 40.7
Manes.01G079300 Manihot esculenta HOM05D009510 ORTHO05D010335 9.5e-07 57.8 88 48.9
Duzib068G0669 Durio zibethinus HOM05D009510 ORTHO05D010335 1.6e-06 57.0 62 54.8
TWI81G0126 Tripterygium wilfordii HOM05D009510 ORTHO05D010335 1.6e-06 57.0 74 45.9
CiPaw.12G108600 Carya illinoinensis HOM05D009510 ORTHO05D010335 2.1e-06 56.6 72 51.4
Gohir.A08G172100 Gossypium hirsutum HOM05D009510 ORTHO05D010335 2.1e-06 56.6 118 39.8
PGSC0003DMG400004801 Solanum tuberosum HOM05D012984 ORTHO05D010335 2.1e-06 56.6 95 41.1
DCAR_006823 Daucus carota HOM05D009510 ORTHO05D010335 2.8e-06 56.2 62 53.2
Glyma.11G031700 Glycine max HOM05D013054 ORTHO05D010335 2.8e-06 56.2 49 61.2
Solyc08g078840.3 Solanum lycopersicum HOM05D012984 ORTHO05D010335 2.8e-06 56.2 111 34.2
Thecc.03G254000 Theobroma cacao HOM05D009510 ORTHO05D010335 2.8e-06 56.2 83 48.2
Duzib205G1076 Durio zibethinus HOM05D009510 ORTHO05D010335 4.7e-06 55.5 135 39.3
FAN04G3221 Fragaria x ananassa HOM05D015618 ORTHO05D010335 6.2e-06 55.1 142 35.2
FAN08G2540 Fragaria x ananassa HOM05D015618 ORTHO05D010335 6.2e-06 55.1 143 34.3
Sopen08g027300 Solanum pennellii HOM05D012984 ORTHO05D010335 6.2e-06 55.1 108 37.0
RcHm_v2.0_Chr7g0202891 Rosa chinensis HOM05D015618 ORTHO05D010335 8.0e-06 54.7 106 39.6


User provided reference genes

Program Settings