Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0028471 Camellia sinensis var. sinensis HOM05D006047 ORTHO05D007353 2.1e-61 239.2 152 100.0
Dinv41931 Davidia involucrata HOM05D006047 ORTHO05D007353 3.8e-39 165.2 153 64.7
vmacro17314 Vaccinium macrocarpon HOM05D006047 ORTHO05D007353 8.5e-39 164.1 152 64.5
Rhsim05G0054100 Rhododendron simsii HOM05D006047 ORTHO05D007353 1.1e-38 163.7 152 63.8
PGSC0003DMG400006182 Solanum tuberosum HOM05D006047 ORTHO05D007353 7.2e-38 161.0 151 58.9
Hma1.2p1_0163F.1_g072560 Hydrangea macrophylla HOM05D006047 ORTHO05D007353 1.2e-37 160.2 152 61.2
Peaxi162Scf00362g00511 Petunia axillaris HOM05D006047 ORTHO05D007353 1.6e-37 159.8 149 61.1
MBI16_g27295_MAGBIO Magnolia biondii HOM05D006047 ORTHO05D007353 1.4e-36 156.8 152 59.2
COL.COLO4_17357 Corchorus olitorius HOM05D006047 ORTHO05D007353 1.8e-36 156.4 154 60.4
Duzib132G0293 Durio zibethinus HOM05D006047 ORTHO05D007353 1.8e-36 156.4 154 59.7
Thecc.02G058000 Theobroma cacao HOM05D006047 ORTHO05D007353 1.8e-36 156.4 153 60.8
Cfa005258 Carpinus fangiana HOM05D006047 ORTHO05D007353 3.0e-36 155.6 141 66.0
TAR625G1286 Trochodendron aralioides HOM05D006047 ORTHO05D007353 4.0e-36 155.2 147 59.2
TAR625G1483 Trochodendron aralioides HOM05D006047 ORTHO05D007353 4.0e-36 155.2 147 59.2
Manes.11G097000 Manihot esculenta HOM05D006047 ORTHO05D007353 6.7e-36 154.5 149 60.4
CiPaw.06G121100 Carya illinoinensis HOM05D006047 ORTHO05D007353 4.4e-35 151.8 144 61.8
CSS0000109 Camellia sinensis var. sinensis HOM05D006047 ORTHO05D007353 5.7e-35 151.4 146 59.6
Lsat_1_v5_gn_4_71821 Lactuca sativa HOM05D006047 ORTHO05D007353 5.7e-35 151.4 148 62.8
Sed0015003 Sechium edule HOM05D006047 ORTHO05D007353 7.5e-35 151.0 150 60.0
Solyc01g111670.4 Solanum lycopersicum HOM05D006047 ORTHO05D007353 7.5e-35 151.0 151 56.3
Sopen01g053710 Solanum pennellii HOM05D006047 ORTHO05D007353 7.5e-35 151.0 151 56.3
CANSAT21G1105 Cannabis sativa HOM05D006047 ORTHO05D007353 9.7e-35 150.6 149 59.1
ClCG02G012010 Citrullus lanatus HOM05D006047 ORTHO05D007353 9.7e-35 150.6 148 60.1
Nn6g31863 Nelumbo nucifera HOM05D006047 ORTHO05D007353 1.3e-34 150.2 142 59.9
vmacro17313 Vaccinium macrocarpon HOM05D006047 ORTHO05D007353 1.3e-34 150.2 148 59.5
Sc08g0002850 Simmondsia chinensis HOM05D006047 ORTHO05D007353 2.2e-34 149.4 145 60.0
GSVIVG01024006001 Vitis vinifera HOM05D006047 ORTHO05D007353 2.2e-34 149.4 151 61.6
PGR042G1307 Punica granatum HOM05D006047 ORTHO05D007353 3.7e-34 148.7 152 55.9
Ciclev10029458m.g Citrus clementina HOM05D006047 ORTHO05D007353 8.2e-34 147.5 154 59.7
MD10G1125900 Malus domestica HOM05D006047 ORTHO05D007353 8.2e-34 147.5 150 60.0
Aqoxy1G03282 Aquilegia oxysepala HOM05D006047 ORTHO05D007353 1.1e-33 147.1 147 58.5
Haze_02125 Corylus avellana HOM05D006047 ORTHO05D007353 1.1e-33 147.1 141 69.5
MELO3C020826.2 Cucumis melo HOM05D006047 ORTHO05D007353 1.1e-33 147.1 153 57.5
HanXRQChr12g0374651 Helianthus annuus HOM05D006047 ORTHO05D007353 1.4e-33 146.7 145 61.4
Gorai.002G002400 Gossypium raimondii HOM05D006047 ORTHO05D007353 1.8e-33 146.4 142 59.2
AUR62013019 Chenopodium quinoa HOM05D006047 ORTHO05D007353 2.4e-33 146.0 151 57.0
EL10Ac9g21359 Beta vulgaris HOM05D006047 ORTHO05D007353 3.1e-33 145.6 146 58.9
Gohir.A01G002200 Gossypium hirsutum HOM05D006047 ORTHO05D007353 3.1e-33 145.6 142 59.2
SGA_v2.0_scaffold207G41930 Striga asiatica HOM05D006047 ORTHO05D007353 3.1e-33 145.6 143 58.7
CiPaw.05G083500 Carya illinoinensis HOM05D006047 ORTHO05D007353 4.1e-33 145.2 148 58.8
AUR62010029 Chenopodium quinoa HOM05D006047 ORTHO05D007353 4.1e-33 145.2 151 57.0
HanXRQChr10g0300821 Helianthus annuus HOM05D006047 ORTHO05D007353 4.1e-33 145.2 145 60.0
CsaV3_2G016180 Cucumis sativus L. HOM05D006047 ORTHO05D007353 5.3e-33 144.8 147 58.5
MD05G1123100 Malus domestica HOM05D006047 ORTHO05D007353 5.3e-33 144.8 154 58.4
Potri.009G136100 Populus trichocarpa HOM05D006047 ORTHO05D007353 5.3e-33 144.8 154 57.8
Gohir.D01G001800 Gossypium hirsutum HOM05D006047 ORTHO05D007353 7.0e-33 144.4 142 58.5
FAN27G2596 Fragaria x ananassa HOM05D001601 ORTHO05D002628 1.6e-32 143.3 142 57.7
Gohir.D02G226700 Gossypium hirsutum HOM05D006047 ORTHO05D007353 1.6e-32 143.3 152 55.9
Gorai.005G254600 Gossypium raimondii HOM05D006047 ORTHO05D007353 1.6e-32 143.3 152 55.9
Cpa.g.sc20.97 Carica papaya HOM05D006047 ORTHO05D007353 2.7e-32 142.5 154 57.8
FAN20G3211 Fragaria x ananassa HOM05D006047 ORTHO05D007353 2.7e-32 142.5 142 57.7
Actinidia32040 Actinidia chinensis HOM05D006047 ORTHO05D007353 7.7e-32 141.0 135 60.7
FvH4_2g15480 Fragaria vesca HOM05D006047 ORTHO05D007353 1.0e-31 140.6 142 58.5
FAN24G2638 Fragaria x ananassa HOM05D006047 ORTHO05D007353 1.0e-31 140.6 142 58.5
Aqoxy3G00951 Aquilegia oxysepala HOM05D006047 ORTHO05D007353 1.3e-31 140.2 141 57.4
HPP92_012949 Vanilla planifolia HOM05D006047 ORTHO05D007353 1.7e-31 139.8 144 54.9
Migut.N01327 Erythranthe guttata HOM05D006047 ORTHO05D007353 2.2e-31 139.4 153 52.9
Gohir.A03G205400 Gossypium hirsutum HOM05D006047 ORTHO05D007353 2.2e-31 139.4 151 54.3
Prupe.8G167000 Prunus persica HOM05D006047 ORTHO05D007353 2.2e-31 139.4 151 55.0
PSO782G4934 Papaver somniferum HOM05D006047 ORTHO05D007353 2.9e-31 139.0 144 54.9
Sed0000957 Sechium edule HOM05D006047 ORTHO05D007353 2.9e-31 139.0 145 56.6
SGA_v2.0_scaffold80G25840 Striga asiatica HOM05D006047 ORTHO05D007353 2.9e-31 139.0 142 58.5
PSO063G4836 Papaver somniferum HOM05D006047 ORTHO05D007353 3.8e-31 138.7 143 55.2
SHI05754 Sapria himalayana HOM05D006047 ORTHO05D007353 3.8e-31 138.7 147 57.1
Sopen11g024350 Solanum pennellii HOM05D006047 ORTHO05D007353 5.0e-31 138.3 151 53.0
Atru.chr5.3378 Acer truncatum HOM05D006047 ORTHO05D007353 1.1e-30 137.1 159 51.6
FAN15G3104 Fragaria x ananassa HOM05D006047 ORTHO05D007353 1.1e-30 137.1 142 57.7
DCAR_003178 Daucus carota HOM05D006047 ORTHO05D007353 1.5e-30 136.7 140 54.3
ECA234G0646 Erigeron canadensis HOM05D006047 ORTHO05D000476 1.5e-30 136.7 139 61.2
Phvul.008G049800 Phaseolus vulgaris HOM05D006047 ORTHO05D007353 1.5e-30 136.7 145 53.8
RcHm_v2.0_Chr6g0278481 Rosa chinensis HOM05D006047 ORTHO05D007353 1.9e-30 136.3 142 56.3
Medtr7g081070 Medicago truncatula HOM05D006047 ORTHO05D007353 2.5e-30 136.0 142 54.2
Aa31LG6G16610 Aethionema arabicum HOM05D006047 ORTHO05D007353 3.2e-30 135.6 150 52.7
Psat3g100240 Pisum sativum HOM05D006047 ORTHO05D007353 3.2e-30 135.6 142 56.3
Cc09_g09850 Coffea canephora HOM05D006047 ORTHO05D007353 5.5e-30 134.8 152 57.9
Ca_08043_v3 Cicer arietinum L. HOM05D006047 ORTHO05D007353 7.2e-30 134.4 142 54.2
Actinidia21466 Actinidia chinensis HOM05D006047 ORTHO05D007353 9.4e-30 134.0 134 59.0
Lj1g0011713 Lotus japonicus HOM05D006047 ORTHO05D007353 9.4e-30 134.0 142 52.8
Lalb_Chr01g0021661 Lupinus albus HOM05D006047 ORTHO05D007353 1.6e-29 133.3 142 52.1
Actinidia39157 Actinidia chinensis HOM05D006047 ORTHO05D007353 2.1e-29 132.9 134 58.2
Glyma.09G245500 Glycine max HOM05D006047 ORTHO05D007353 2.1e-29 132.9 143 51.0
Sabra09G0105700 Salix brachista HOM05D006047 ORTHO05D007353 2.1e-29 132.9 140 55.7
Ah.01g023100 Amaranthus hybridus HOM05D006047 ORTHO05D007353 2.7e-29 132.5 146 52.1
ATR0064G037 Amborella trichopoda HOM05D006047 ORTHO05D007353 2.7e-29 132.5 143 62.2
Duzib248G0446 Durio zibethinus HOM05D006047 ORTHO05D007353 2.7e-29 132.5 154 54.5
Eucgr.G01785 Eucalyptus grandis HOM05D006047 ORTHO05D007353 2.7e-29 132.5 151 50.3
TPR.G32107 Trifolium pratense HOM05D006047 ORTHO05D007353 2.7e-29 132.5 143 53.8
unitig_52.g17373 Utricularia gibba HOM05D006047 ORTHO05D007353 2.7e-29 132.5 150 54.0
VMungo1383G0342 Vigna mungo HOM05D006047 ORTHO05D007353 3.6e-29 132.1 145 52.4
Glyma.18G247500 Glycine max HOM05D006047 ORTHO05D007353 8.0e-29 131.0 148 50.7
Lsat_1_v5_gn_8_123180 Lactuca sativa HOM05D006047 ORTHO05D007353 1.0e-28 130.6 136 58.1
Lalb_Chr19g0126421 Lupinus albus HOM05D006047 ORTHO05D007353 1.0e-28 130.6 142 51.4
QL11p050986 Quercus lobata HOM05D006047 ORTHO05D007353 1.0e-28 130.6 136 62.5
AT2G20940 Arabidopsis thaliana HOM05D006047 ORTHO05D007353 5.2e-28 128.3 140 54.3
Nitab4.5_0000283g0480 Nicotiana tabacum HOM05D006047 ORTHO05D007353 8.8e-28 127.5 142 61.3
CDE02G0256 Ceratophyllum demersum HOM05D006047 ORTHO05D007353 1.2e-27 127.1 141 52.5
AL4G10070 Arabidopsis lyrata HOM05D006047 ORTHO05D007353 1.5e-27 126.7 140 54.3
Carub.0004s0003 Capsella rubella HOM05D006047 ORTHO05D007353 1.3e-26 123.6 140 53.6
CARHR174220 Cardamine hirsuta HOM05D006047 ORTHO05D007353 1.7e-26 123.2 140 51.4
Solyc03g044590.2 Solanum lycopersicum HOM05D006047 ORTHO05D007353 1.7e-26 123.2 144 50.7
Sp4g00130 Schrenkiella parvula HOM05D006047 ORTHO05D007353 2.2e-26 122.9 140 52.9
BcaB06g27764 Brassica carinata HOM05D006047 ORTHO05D007353 4.8e-26 121.7 143 51.0
A04p15840 Brassica napus HOM05D006047 ORTHO05D007353 6.3e-26 121.3 143 51.0
C04p50240 Brassica napus HOM05D006047 ORTHO05D007353 6.3e-26 121.3 143 51.0
BolC4t26624H Brassica oleracea HOM05D006047 ORTHO05D007353 6.3e-26 121.3 143 51.0
BraA04t17215Z Brassica rapa HOM05D006047 ORTHO05D007353 6.3e-26 121.3 143 51.0
TWI31G0769 Tripterygium wilfordii HOM05D006047 ORTHO05D007353 1.4e-25 120.2 147 50.3
Thhalv10000376m.g Eutrema salsugineum HOM05D006047 ORTHO05D007353 1.8e-25 119.8 140 52.1
THA.LOC104824759 Tarenaya hassleriana HOM05D006047 ORTHO05D007353 2.4e-25 119.4 146 57.5
AagrBONN_evm.TU.Sc2ySwM_362.1962 Anthoceros agrestis HOM05D006047 ORTHO05D007353 7.0e-25 117.9 148 46.6
Nitab4.5_0003914g0120 Nicotiana tabacum HOM05D006047 ORTHO05D007353 1.3e-23 113.6 128 60.9
Zm00001eb331780 Zea mays HOM05D006047 ORTHO05D007353 5.0e-23 111.7 144 45.1
Pp3c24_20200 Physcomitrium patens HOM05D006047 ORTHO05D007353 2.1e-21 106.3 145 44.8
Zm00001eb103880 Zea mays HOM05D006047 ORTHO05D007353 1.8e-20 103.2 139 45.3
SMO367G0473 Selaginella moellendorffii HOM05D006047 ORTHO05D007353 6.8e-20 101.3 159 42.8
BcaB01g02958 Brassica carinata HOM05D006047 ORTHO05D007353 8.8e-20 100.9 139 45.3
Mapoly0036s0025 Marchantia polymorpha HOM05D006047 ORTHO05D007353 5.7e-19 98.2 145 38.6
MD05G1195600 Malus domestica HOM05D006047 ORTHO05D007353 1.2e-16 90.5 122 46.7
Sopen11g011060 Solanum pennellii HOM05D011435 ORTHO05D012656 1.6e-16 90.1 136 42.6
CAN.G588.87 Capsicum annuum HOM05D006047 ORTHO05D007353 2.0e-16 89.7 73 63.0
SEGI_27161 Sequoiadendron giganteum HOM05D006047 ORTHO05D007353 4.5e-16 88.6 120 44.2
CDE04G1108 Ceratophyllum demersum HOM05D006047 ORTHO05D007353 2.9e-15 85.9 122 43.4
PGR083G0073 Punica granatum HOM05D006047 ORTHO05D007353 4.7e-13 78.6 141 39.7
Sed0021144 Sechium edule HOM05D006047 ORTHO05D007353 6.1e-13 78.2 59 69.5
Sed0002860 Sechium edule HOM05D006047 ORTHO05D007353 3.0e-12 75.9 59 67.8
SalBow5G2603 Salvia bowleyana HOM05D006047 ORTHO05D007353 4.4e-11 72.0 49 67.3
BcaC01g04858 Brassica carinata HOM05D006047 ORTHO05D007353 1.4e-09 67.0 143 35.7
HPP92_025899 Vanilla planifolia HOM05D006047 ORTHO05D007353 1.8e-09 66.6 46 63.0
TAR624G0128 Trochodendron aralioides HOM05D006047 ORTHO05D007353 8.6e-07 57.8 47 61.7
Zm00001eb046330 Zea mays HOM05D001486 ORTHO05D036446 8.6e-07 57.8 40 72.5


User provided reference genes

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