Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0028466 Camellia sinensis var. sinensis HOM05D000669 ORTHO05D008810 9.9e-71 270.0 136 100.0
Dinv13511 Davidia involucrata HOM05D000669 ORTHO05D008810 4.8e-17 91.7 143 44.1
vmacro11087 Vaccinium macrocarpon HOM05D000669 ORTHO05D008810 1.1e-13 80.5 64 68.8
Rhsim02G0136400 Rhododendron simsii HOM05D000669 ORTHO05D008810 3.2e-13 79.0 66 71.2
Lsat_1_v5_gn_3_76061 Lactuca sativa HOM05D000669 ORTHO05D008810 3.6e-12 75.5 142 38.0
Potri.007G023200 Populus trichocarpa HOM05D000669 ORTHO05D008810 7.9e-12 74.3 72 62.5
Sabra07G0020200 Salix brachista HOM05D000669 ORTHO05D008810 1.8e-11 73.2 64 65.6
Atru.chr3.603 Acer truncatum HOM05D000669 ORTHO05D008810 5.1e-11 71.6 136 38.2
VMungo1215G2722 Vigna mungo HOM05D000669 ORTHO05D008810 7.4e-10 67.8 144 35.4
HanXRQChr16g0530621 Helianthus annuus HOM05D000669 ORTHO05D008810 1.7e-09 66.6 142 36.6
Actinidia36570 Actinidia chinensis HOM05D000669 ORTHO05D008810 2.8e-09 65.9 42 76.2
Cpa.g.sc6.134 Carica papaya HOM05D000669 ORTHO05D008810 3.7e-09 65.5 143 36.4
Solyc02g085100.3 Solanum lycopersicum HOM05D000669 ORTHO05D008810 6.3e-09 64.7 135 37.0
vmacro12729 Vaccinium macrocarpon HOM05D002015 ORTHO05D002395 6.3e-09 64.7 59 59.3
Ciclev10026121m.g Citrus clementina HOM05D000669 ORTHO05D008810 1.4e-08 63.5 143 36.4
Sc03g0003070 Simmondsia chinensis HOM05D000669 ORTHO05D008810 1.8e-08 63.2 143 34.3
PGSC0003DMG400003513 Solanum tuberosum HOM05D000669 ORTHO05D008810 1.8e-08 63.2 135 36.3
Glyma.01G173300 Glycine max HOM05D000669 ORTHO05D008810 2.4e-08 62.8 145 35.2
Lj2g0023842 Lotus japonicus HOM05D000669 ORTHO05D008810 2.4e-08 62.8 138 34.8
Hma1.2p1_1820F.1_g304170 Hydrangea macrophylla HOM05D000669 ORTHO05D008810 3.1e-08 62.4 71 56.3
Aqoxy5G01595 Aquilegia oxysepala HOM05D000669 ORTHO05D008810 4.1e-08 62.0 141 35.5
Nitab4.5_0000178g0210 Nicotiana tabacum HOM05D000669 ORTHO05D008810 4.1e-08 62.0 135 34.8
Nitab4.5_0006115g0030 Nicotiana tabacum HOM05D000669 ORTHO05D008810 4.1e-08 62.0 135 34.8
Thecc.01G033100 Theobroma cacao HOM05D000669 ORTHO05D008810 4.1e-08 62.0 136 34.6
CANSAT01G1107 Cannabis sativa HOM05D000669 ORTHO05D008810 5.3e-08 61.6 60 53.3
CAN.G358.65 Capsicum annuum HOM05D000669 ORTHO05D008810 5.3e-08 61.6 135 35.6
Cfa004329 Carpinus fangiana HOM05D000669 ORTHO05D008810 5.3e-08 61.6 137 37.2
TWI73G1074 Tripterygium wilfordii HOM05D000669 ORTHO05D008810 5.3e-08 61.6 147 36.1
Manes.02G095500 Manihot esculenta HOM05D000669 ORTHO05D008810 7.0e-08 61.2 107 35.5
Cc07_g09700 Coffea canephora HOM05D000669 ORTHO05D008810 9.1e-08 60.8 121 33.1
TAR376G0664 Trochodendron aralioides HOM05D000669 ORTHO05D008810 1.2e-07 60.5 71 49.3
Phvul.002G031900 Phaseolus vulgaris HOM05D000669 ORTHO05D008810 2.0e-07 59.7 122 35.2
Duzib147G0643 Durio zibethinus HOM05D000669 ORTHO05D008810 3.4e-07 58.9 71 47.9
Gohir.A11G183300 Gossypium hirsutum HOM05D000669 ORTHO05D008810 3.4e-07 58.9 143 32.2
Gorai.007G202000 Gossypium raimondii HOM05D000669 ORTHO05D008810 5.9e-07 58.2 143 32.2
QL06p046584 Quercus lobata HOM05D000669 ORTHO05D008810 5.9e-07 58.2 144 36.8
FAN19G3134 Fragaria x ananassa HOM05D000669 ORTHO05D008810 7.7e-07 57.8 135 31.9
PGR102G2455 Punica granatum HOM05D000669 ORTHO05D008810 7.7e-07 57.8 138 33.3
ClCG07G008390 Citrullus lanatus HOM05D000669 ORTHO05D008810 1.3e-06 57.0 142 31.0
Nn1g04946 Nelumbo nucifera HOM05D000669 ORTHO05D008810 1.3e-06 57.0 118 32.2
RcHm_v2.0_Chr2g0101191 Rosa chinensis HOM05D000669 ORTHO05D008810 1.7e-06 56.6 141 32.6
Peaxi162Scf00366g00530 Petunia axillaris HOM05D000669 ORTHO05D008810 2.2e-06 56.2 71 50.7
FAN23G2804 Fragaria x ananassa HOM05D000669 ORTHO05D008810 2.9e-06 55.8 77 42.9
FAN28G0240 Fragaria x ananassa HOM05D000669 ORTHO05D008810 3.8e-06 55.5 144 31.2
Ca_24861_v3 Cicer arietinum L. HOM05D000669 ORTHO05D008810 6.5e-06 54.7 67 47.8
CiPaw.02G019200 Carya illinoinensis HOM05D000669 ORTHO05D008810 8.5e-06 54.3 73 52.1


User provided reference genes

Program Settings