Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0028465 Camellia sinensis var. sinensis HOM05D002281 ORTHO05D005599 0.0e+00 2550.0 1287 100.0
Dinv05786 Davidia involucrata HOM05D002281 ORTHO05D005599 0.0e+00 2379.4 1287 92.8
Cfa006304 Carpinus fangiana HOM05D002281 ORTHO05D005599 0.0e+00 2322.0 1287 90.0
GSVIVG01026355001 Vitis vinifera HOM05D002281 ORTHO05D005599 0.0e+00 2314.7 1299 88.5
Gohir.A13G102900 Gossypium hirsutum HOM05D002281 ORTHO05D005599 0.0e+00 2314.3 1286 89.0
Gorai.013G119000 Gossypium raimondii HOM05D002281 ORTHO05D005599 0.0e+00 2311.2 1286 88.9
Thecc.05G264800 Theobroma cacao HOM05D002281 ORTHO05D005599 0.0e+00 2308.5 1286 88.7
Gohir.D13G106101 Gossypium hirsutum HOM05D002281 ORTHO05D005599 0.0e+00 2306.9 1286 88.6
Atru.chr2.1138 Acer truncatum HOM05D002281 ORTHO05D005599 0.0e+00 2304.6 1284 89.5
CANSAT54G0020 Cannabis sativa HOM05D002281 ORTHO05D005599 0.0e+00 2293.5 1287 88.0
CiPaw.07G076600 Carya illinoinensis HOM05D002281 ORTHO05D005599 0.0e+00 2293.1 1287 88.7
Potri.019G025200 Populus trichocarpa HOM05D002281 ORTHO05D005599 0.0e+00 2292.7 1287 88.6
Prupe.6G354800 Prunus persica HOM05D002281 ORTHO05D005599 0.0e+00 2285.4 1284 88.9
Manes.09G145500 Manihot esculenta HOM05D002281 ORTHO05D005599 0.0e+00 2276.5 1287 87.9
FvH4_6g01330 Fragaria vesca HOM05D002281 ORTHO05D005599 0.0e+00 2275.0 1284 88.6
Hma1.2p1_0153F.1_g067890 Hydrangea macrophylla HOM05D002281 ORTHO05D005599 0.0e+00 2271.5 1293 88.6
ECA233G3880 Erigeron canadensis HOM05D002281 ORTHO05D005599 0.0e+00 2270.4 1288 88.0
Solyc11g013280.1 Solanum lycopersicum HOM05D002281 ORTHO05D005599 0.0e+00 2268.0 1288 87.4
TAR362G0445 Trochodendron aralioides HOM05D002281 ORTHO05D005599 0.0e+00 2268.0 1287 88.3
Potri.013G051200 Populus trichocarpa HOM05D002281 ORTHO05D005599 0.0e+00 2264.2 1287 87.6
TWI60G0078 Tripterygium wilfordii HOM05D002281 ORTHO05D005599 0.0e+00 2263.8 1286 87.2
FAN14G5004 Fragaria x ananassa HOM05D002281 ORTHO05D005599 0.0e+00 2261.1 1287 88.3
FAN09G1447 Fragaria x ananassa HOM05D002281 ORTHO05D005599 0.0e+00 2259.2 1284 88.2
FAN05G1240 Fragaria x ananassa HOM05D002281 ORTHO05D005599 0.0e+00 2258.8 1297 87.5
Eucgr.B02169 Eucalyptus grandis HOM05D002281 ORTHO05D005599 0.0e+00 2257.3 1292 86.8
Duzib106G1897 Durio zibethinus HOM05D002281 ORTHO05D005599 0.0e+00 2256.1 1286 87.2
SalBow7G0462 Salvia bowleyana HOM05D002281 ORTHO05D005599 0.0e+00 2253.4 1288 86.4
PGR142G2635 Punica granatum HOM05D002281 ORTHO05D005599 0.0e+00 2252.6 1287 86.7
Sopen11g008300 Solanum pennellii HOM05D002281 ORTHO05D005599 0.0e+00 2250.7 1288 87.1
Glyma.03G253000 Glycine max HOM05D002281 ORTHO05D005599 0.0e+00 2249.6 1288 87.6
Glyma.19G250600 Glycine max HOM05D002281 ORTHO05D005599 0.0e+00 2249.2 1288 87.3
HanXRQChr04g0111671 Helianthus annuus HOM05D002281 ORTHO05D005599 0.0e+00 2241.5 1303 86.3
Phvul.006G107600 Phaseolus vulgaris HOM05D002281 ORTHO05D005599 0.0e+00 2237.2 1288 86.8
MSTRG.1472 Avicennia marina HOM05D002281 ORTHO05D005599 0.0e+00 2234.1 1288 85.7
Migut.C01166 Erythranthe guttata HOM05D002281 ORTHO05D005599 0.0e+00 2233.0 1288 86.0
Lj1g0020458 Lotus japonicus HOM05D002281 ORTHO05D005599 0.0e+00 2232.6 1288 86.6
Sabra19G0037800 Salix brachista HOM05D002281 ORTHO05D005599 0.0e+00 2231.4 1303 86.0
SalBow7G2659 Salvia bowleyana HOM05D002281 ORTHO05D005599 0.0e+00 2231.4 1288 85.9
Medtr7g116590 Medicago truncatula HOM05D002281 ORTHO05D005599 0.0e+00 2228.4 1294 86.3
Sabra19G0034800 Salix brachista HOM05D002281 ORTHO05D005599 0.0e+00 2227.2 1303 85.8
arahy.Tifrunner.gnm1.ann1.KCE1UK Arachis hypogaea HOM05D002281 ORTHO05D005599 0.0e+00 2224.5 1325 84.8
VMungo0540G0745 Vigna mungo HOM05D002281 ORTHO05D005599 0.0e+00 2211.4 1288 85.9
Lsat_1_v5_gn_8_2941 Lactuca sativa HOM05D002281 ORTHO05D005599 0.0e+00 2210.6 1289 86.3
Ciclev10023801m.g Citrus clementina HOM05D002281 ORTHO05D005599 0.0e+00 2207.9 1292 86.0
Sed0017844 Sechium edule HOM05D002281 ORTHO05D005599 0.0e+00 2202.2 1296 84.7
Nitab4.5_0000494g0100 Nicotiana tabacum HOM05D002281 ORTHO05D005599 0.0e+00 2199.9 1288 85.6
THA.LOC104820753 Tarenaya hassleriana HOM05D002281 ORTHO05D005599 0.0e+00 2194.5 1286 84.6
COL.COLO4_38179 Corchorus olitorius HOM05D002281 ORTHO05D005599 0.0e+00 2192.5 1286 84.9
Carub.0006s1667 Capsella rubella HOM05D002281 ORTHO05D005599 0.0e+00 2191.4 1286 84.4
Nn1g03089 Nelumbo nucifera HOM05D002281 ORTHO05D005599 0.0e+00 2189.8 1287 85.2
AT5G18410 Arabidopsis thaliana HOM05D002281 ORTHO05D005599 0.0e+00 2187.1 1286 84.1
Thhalv10012457m.g Eutrema salsugineum HOM05D002281 ORTHO05D005599 0.0e+00 2183.7 1287 84.3
CARHR194610 Cardamine hirsuta HOM05D002281 ORTHO05D005599 0.0e+00 2182.1 1286 84.0
Sc09g0001770 Simmondsia chinensis HOM05D002281 ORTHO05D005599 0.0e+00 2173.7 1289 83.7
AL6G29660 Arabidopsis lyrata HOM05D002281 ORTHO05D005599 0.0e+00 2173.3 1290 83.7
Aqoxy5G01434 Aquilegia oxysepala HOM05D002281 ORTHO05D005599 0.0e+00 2172.5 1287 83.8
PSO674G0074 Papaver somniferum HOM05D002281 ORTHO05D005599 0.0e+00 2172.5 1287 84.1
BolC3t13512H Brassica oleracea HOM05D002281 ORTHO05D005599 0.0e+00 2169.4 1295 83.2
arahy.Tifrunner.gnm1.ann1.T4Q4MP Arachis hypogaea HOM05D002281 ORTHO05D005599 0.0e+00 2168.3 1293 84.8
Ca_09474_v3 Cicer arietinum L. HOM05D002281 ORTHO05D005599 0.0e+00 2166.7 1311 83.8
PSO170G6144 Papaver somniferum HOM05D002281 ORTHO05D005599 0.0e+00 2160.2 1287 83.8
Haze_04485 Corylus avellana HOM05D002281 ORTHO05D005599 0.0e+00 2159.0 1307 84.2
BraA03t10208Z Brassica rapa HOM05D002281 ORTHO05D005599 0.0e+00 2155.9 1298 82.7
FAN05G1274 Fragaria x ananassa HOM05D002281 ORTHO05D005599 0.0e+00 2152.9 1286 84.8
Sp6g25910 Schrenkiella parvula HOM05D002281 ORTHO05D005599 0.0e+00 2134.0 1289 82.6
EL10Ac4g09788 Beta vulgaris HOM05D002281 ORTHO05D005599 0.0e+00 2129.4 1287 82.2
A03p08830 Brassica napus HOM05D002281 ORTHO05D005599 0.0e+00 2116.3 1299 81.4
C03p10320 Brassica napus HOM05D002281 ORTHO05D005599 0.0e+00 2110.9 1296 81.6
Nitab4.5_0000051g0330 Nicotiana tabacum HOM05D002281 ORTHO05D005599 0.0e+00 2110.9 1415 77.3
SGA_v2.0_scaffold52G18996 Striga asiatica HOM05D002281 ORTHO05D005599 0.0e+00 2096.6 1213 85.6
BcaB01g05191 Brassica carinata HOM05D002281 ORTHO05D005599 0.0e+00 2084.3 1299 80.4
Cc10_g10590 Coffea canephora HOM05D002281 ORTHO05D005599 0.0e+00 2047.7 1174 86.5
Sabra13G0046600 Salix brachista HOM05D002281 ORTHO05D005599 0.0e+00 2030.4 1548 70.0
Hund07164 Selenicereus undatus HOM05D002281 ORTHO05D005599 0.0e+00 2004.6 1220 81.4
Aa31LG11G11220 Aethionema arabicum HOM05D002281 ORTHO05D005599 0.0e+00 1958.7 1289 77.7
Os03g0143800 Oryza sativa ssp. japonica HOM05D002281 ORTHO05D005599 0.0e+00 1936.4 1292 75.1
Zm00001eb003550 Zea mays HOM05D002281 ORTHO05D005599 0.0e+00 1903.6 1289 73.6
AUR62000642 Chenopodium quinoa HOM05D002281 ORTHO05D005599 0.0e+00 1810.4 1315 72.0
Actinidia03823 Actinidia chinensis HOM05D002281 ORTHO05D005599 0.0e+00 1687.9 907 91.6
Cpa.g.sc51.37 Carica papaya HOM05D002281 ORTHO05D005599 0.0e+00 1686.4 959 88.1
Psat0s3583g0040 Pisum sativum HOM05D002281 ORTHO05D005599 0.0e+00 1681.8 955 88.2
Rhsim05G0168900 Rhododendron simsii HOM05D002281 ORTHO05D005599 0.0e+00 1681.0 1069 80.9
RcHm_v2.0_Chr3g0448901 Rosa chinensis HOM05D002281 ORTHO05D005599 0.0e+00 1663.7 938 87.6
MELO3C015463.2 Cucumis melo HOM05D002281 ORTHO05D005599 0.0e+00 1565.1 938 82.0
Lalb_Chr18g0044201 Lupinus albus HOM05D002281 ORTHO05D005599 0.0e+00 1561.6 914 84.8
HPP92_013019 Vanilla planifolia HOM05D002281 ORTHO05D005599 0.0e+00 1553.5 1212 66.0
unitig_736.g22260 Utricularia gibba HOM05D002281 ORTHO05D005599 0.0e+00 1537.3 1182 67.4
AagrBONN_evm.TU.Sc2ySwM_344.4016 Anthoceros agrestis HOM05D002281 ORTHO05D005599 0.0e+00 1526.9 1293 60.2
Mapoly0078s0045 Marchantia polymorpha HOM05D002281 ORTHO05D005599 0.0e+00 1526.1 1293 59.3
CsaV3_1G040360 Cucumis sativus L. HOM05D002281 ORTHO05D005599 0.0e+00 1520.4 912 82.1
ClCG03G011410 Citrullus lanatus HOM05D002281 ORTHO05D005599 0.0e+00 1519.2 910 82.0
Peaxi162Scf00285g00226 Petunia axillaris HOM05D002281 ORTHO05D005599 0.0e+00 1515.7 911 82.3
Pp3c21_8020 Physcomitrium patens HOM05D002281 ORTHO05D005599 0.0e+00 1510.0 1330 57.6
MD12G1252900 Malus domestica HOM05D002281 ORTHO05D005599 0.0e+00 1478.8 836 87.8
SMO348G0052 Selaginella moellendorffii HOM05D002281 ORTHO05D005599 0.0e+00 1473.8 1290 57.8
DCAR_005524 Daucus carota HOM05D002281 ORTHO05D005599 0.0e+00 1463.4 953 77.8
Pp3c2_6040 Physcomitrium patens HOM05D002281 ORTHO05D005599 0.0e+00 1359.7 1307 53.5
ATR0787G096 Amborella trichopoda HOM05D002281 ORTHO05D005599 0.0e+00 1294.6 916 69.5
Hma1.2p1_0153F.1_g067920 Hydrangea macrophylla HOM05D002281 ORTHO05D005599 0.0e+00 1189.9 687 87.2
CAN.G61.7 Capsicum annuum HOM05D002281 ORTHO05D005599 7.0e-275 951.4 803 63.8
Ah.06g188740 Amaranthus hybridus HOM05D002281 ORTHO05D005599 3.0e-254 882.9 827 58.8
Lj2A49T37 Lonicera japonica HOM05D002281 ORTHO05D005599 6.8e-254 881.7 476 92.2
AUR62006997 Chenopodium quinoa HOM05D002281 ORTHO05D005599 1.5e-216 757.7 499 77.2
MD12G1252700 Malus domestica HOM05D002281 ORTHO05D005599 2.6e-213 746.9 451 84.3
SHI14430 Sapria himalayana HOM05D002281 ORTHO05D005599 7.9e-202 708.8 551 67.2
Actinidia03824 Actinidia chinensis HOM05D002281 ORTHO05D005599 6.0e-186 656.0 347 96.0
RcHm_v2.0_Chr3g0448911 Rosa chinensis HOM05D002281 ORTHO05D005599 2.1e-178 630.9 347 92.8
SEGI_41506 Sequoiadendron giganteum HOM05D002281 ORTHO05D005599 5.1e-177 626.3 420 72.9
CAN.G61.6 Capsicum annuum HOM05D002281 ORTHO05D005599 2.4e-174 617.5 347 90.8
Lalb_Chr18g0044191 Lupinus albus HOM05D002281 ORTHO05D005599 1.3e-172 611.7 347 89.9
CDE01G0796 Ceratophyllum demersum HOM05D002281 ORTHO05D005599 9.1e-166 589.0 450 65.8
ATR0787G220 Amborella trichopoda HOM05D002281 ORTHO05D005599 2.0e-165 587.8 347 85.9
ClCG03G011400 Citrullus lanatus HOM05D002281 ORTHO05D005599 4.5e-165 586.6 347 87.0
CsaV3_1G040370 Cucumis sativus L. HOM05D002281 ORTHO05D005599 3.3e-160 570.5 347 85.0
Psat0s2603g0080 Pisum sativum HOM05D002281 ORTHO05D005599 1.2e-157 562.0 335 82.7
CDE01G0576 Ceratophyllum demersum HOM05D002281 ORTHO05D005599 1.3e-156 558.5 385 71.9
CBR_g23328 Chara braunii HOM05D002281 ORTHO05D005599 2.3e-153 547.7 637 45.1
vmacro19963 Vaccinium macrocarpon HOM05D002281 ORTHO05D005599 8.5e-148 529.3 393 73.8
Cpa.g.sc51.41 Carica papaya HOM05D002281 ORTHO05D005599 3.7e-143 513.8 302 83.4
Peaxi162Scf00285g00225 Petunia axillaris HOM05D002281 ORTHO05D005599 1.6e-141 508.4 274 94.2
DCAR_005525 Daucus carota HOM05D002281 ORTHO05D005599 5.6e-131 473.4 261 92.0
HPP92_013016 Vanilla planifolia HOM05D002281 ORTHO05D005599 8.0e-130 469.5 302 75.5
CAN.G61.8 Capsicum annuum HOM05D002281 ORTHO05D005599 7.5e-128 463.0 410 62.0
Lj2A49G34 Lonicera japonica HOM05D002281 ORTHO05D005599 5.0e-124 450.3 243 91.4
Haze_04492 Corylus avellana HOM05D002281 ORTHO05D005599 8.3e-119 433.0 274 83.6
HPP92_013015 Vanilla planifolia HOM05D002281 ORTHO05D005599 6.4e-111 406.8 347 63.4
FAN14G3852 Fragaria x ananassa HOM05D002281 ORTHO05D006774 1.5e-104 385.6 260 77.7
arahy.Tifrunner.gnm1.ann1.I7KFZB Arachis hypogaea HOM05D002281 ORTHO05D005599 5.8e-104 383.6 266 78.6
SEGI_00068 Sequoiadendron giganteum HOM05D002281 ORTHO05D005599 1.1e-83 316.2 264 61.0
vmacro19965 Vaccinium macrocarpon HOM05D002281 ORTHO05D005599 2.4e-81 308.5 166 90.4
Hma1.2p1_0153F.1_g067900 Hydrangea macrophylla HOM05D002281 ORTHO05D005599 1.4e-73 282.7 154 92.2
CBR_g23326 Chara braunii HOM05D002281 ORTHO05D005599 9.3e-70 270.0 466 33.3
vmacro19966 Vaccinium macrocarpon HOM05D002281 ORTHO05D005599 2.0e-64 252.3 426 40.6
Lj2A50T26 Lonicera japonica HOM05D002281 ORTHO05D005599 2.7e-61 241.9 134 89.6
Ah.06g188770 Amaranthus hybridus HOM05D002281 ORTHO05D005599 4.6e-61 241.1 134 87.3
Lj2A49G35 Lonicera japonica HOM05D002281 ORTHO05D005599 1.6e-58 232.6 127 89.8
SHI14432 Sapria himalayana HOM05D002281 ORTHO05D005599 5.3e-57 227.6 142 75.4
Cc10_g10600 Coffea canephora HOM05D002281 ORTHO05D005599 3.4e-56 224.9 130 86.2
Lj2A49T38 Lonicera japonica HOM05D002281 ORTHO05D005599 2.9e-55 221.9 119 88.2
Gorai.007G272700 Gossypium raimondii HOM05D002281 ORTHO05D005599 1.4e-41 176.4 100 83.0
CDE02G3044 Ceratophyllum demersum HOM05D002281 ORTHO05D005599 7.0e-41 174.1 127 65.4
Gohir.D11G253675 Gossypium hirsutum HOM05D002281 ORTHO05D005599 9.1e-41 173.7 100 82.0
BraA03t10210Z Brassica rapa HOM05D002281 ORTHO05D005599 1.7e-39 169.5 123 72.4
CBR_g74560 Chara braunii HOM05D002281 ORTHO05D005599 2.9e-39 168.7 161 53.4
SEGI_02952 Sequoiadendron giganteum HOM05D002281 ORTHO05D005599 3.0e-36 158.7 113 66.4
FAN14G5351 Fragaria x ananassa HOM05D002281 ORTHO05D006774 1.7e-34 152.9 128 65.6
A03p08860 Brassica napus HOM05D002281 ORTHO05D005599 3.7e-34 151.8 123 65.9
SEGI_33538 Sequoiadendron giganteum HOM05D002281 ORTHO05D005599 5.5e-30 137.9 95 62.1
SEGI_28731 Sequoiadendron giganteum HOM05D002281 ORTHO05D005599 7.5e-27 127.5 133 49.6
Gohir.D11G253550 Gossypium hirsutum HOM05D002281 ORTHO05D005599 1.7e-26 126.3 76 80.3
Gorai.007G272500 Gossypium raimondii HOM05D002281 ORTHO05D005599 1.7e-26 126.3 76 78.9
Nn6g32299 Nelumbo nucifera HOM05D002281 ORTHO05D005599 4.1e-25 121.7 73 79.5
Gohir.A11G244201 Gossypium hirsutum HOM05D002281 ORTHO05D005599 3.8e-23 115.2 74 73.0
SHI14427 Sapria himalayana HOM05D000030 ORTHO05D000009 3.8e-23 115.2 112 57.1
arahy.Tifrunner.gnm1.ann1.57298L Arachis hypogaea HOM05D002281 ORTHO05D005599 2.7e-16 92.4 99 54.5
HPP92_013017 Vanilla planifolia HOM05D002281 ORTHO05D005599 1.3e-15 90.1 54 79.6
QL06p040095 Quercus lobata HOM05D002281 ORTHO05D005599 1.8e-12 79.7 77 55.8
Ah.06g188760 Amaranthus hybridus HOM05D002281 ORTHO05D006774 4.1e-09 68.6 142 35.2
vmacro19964 Vaccinium macrocarpon HOM05D002281 ORTHO05D005599 3.0e-07 62.4 34 79.4


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