Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0028445 Camellia sinensis var. sinensis HOM05D005159 ORTHO05D006237 8.4e-88 327.0 168 100.0
CSS0013880 Camellia sinensis var. sinensis HOM05D005159 ORTHO05D006237 3.6e-83 311.6 179 92.2
CSS0007706 Camellia sinensis var. sinensis HOM05D005159 ORTHO05D006237 1.5e-76 289.7 173 89.0
CSS0044288 Camellia sinensis var. sinensis HOM05D005159 ORTHO05D006237 1.5e-76 289.7 173 89.0
Actinidia18107 Actinidia chinensis HOM05D005159 ORTHO05D006237 8.2e-51 204.1 151 72.8
Dinv33896 Davidia involucrata HOM05D005159 ORTHO05D006237 4.2e-47 191.8 138 73.9
TAR371G0967 Trochodendron aralioides HOM05D005159 ORTHO05D006237 1.8e-45 186.4 152 68.4
Nn1g09575 Nelumbo nucifera HOM05D005159 ORTHO05D006237 5.7e-44 181.4 150 68.0
MSTRG.15424 Avicennia marina HOM05D005159 ORTHO05D006237 2.8e-43 179.1 155 63.9
Lju237A1T66 Lonicera japonica HOM05D005159 ORTHO05D006237 6.3e-43 177.9 129 70.5
Ciclev10012260m.g Citrus clementina HOM05D005159 ORTHO05D006237 8.2e-43 177.6 153 64.1
GSVIVG01036491001 Vitis vinifera HOM05D005159 ORTHO05D006237 4.1e-42 175.3 149 63.1
Peaxi162Scf00479g00439 Petunia axillaris HOM05D005159 ORTHO05D006237 9.1e-42 174.1 138 63.8
SGA_v2.0_scaffold10G05141 Striga asiatica HOM05D005159 ORTHO05D006237 5.9e-41 171.4 155 58.7
MBI15_g18197_MAGBIO Magnolia biondii HOM05D005159 ORTHO05D006237 2.9e-40 169.1 152 61.2
Nitab4.5_0001982g0030 Nicotiana tabacum HOM05D005159 ORTHO05D006237 3.8e-40 168.7 158 57.0
Solyc03g046350.3 Solanum lycopersicum HOM05D005159 ORTHO05D006237 5.0e-40 168.3 159 56.6
Cpa.g.sc70.15 Carica papaya HOM05D005159 ORTHO05D006237 6.5e-40 167.9 138 64.5
Nitab4.5_0006224g0050 Nicotiana tabacum HOM05D005159 ORTHO05D006237 6.5e-40 167.9 158 57.0
THA.LOC104805544 Tarenaya hassleriana HOM05D005159 ORTHO05D006237 6.5e-40 167.9 153 64.1
CDE01G0131 Ceratophyllum demersum HOM05D005159 ORTHO05D006237 1.1e-39 167.2 153 62.7
Sopen03g009860 Solanum pennellii HOM05D005159 ORTHO05D006237 1.1e-39 167.2 159 56.6
TAR629G0318 Trochodendron aralioides HOM05D005159 ORTHO05D006237 1.1e-39 167.2 134 67.9
Potri.017G108700 Populus trichocarpa HOM05D005159 ORTHO05D006237 1.5e-39 166.8 146 63.7
CAN.G497.25 Capsicum annuum HOM05D005159 ORTHO05D006237 1.9e-39 166.4 148 59.5
Sc10g0001500 Simmondsia chinensis HOM05D005159 ORTHO05D006237 2.5e-39 166.0 152 62.5
Cc08_g12050 Coffea canephora HOM05D005159 ORTHO05D006237 5.5e-39 164.9 137 63.5
Prupe.3G244000 Prunus persica HOM05D005159 ORTHO05D006237 5.5e-39 164.9 122 70.5
PGSC0003DMG400010100 Solanum tuberosum HOM05D005159 ORTHO05D006237 9.4e-39 164.1 148 60.1
Migut.K00872 Erythranthe guttata HOM05D005159 ORTHO05D006237 1.2e-38 163.7 130 66.2
PGSC0003DMG400018775 Solanum tuberosum HOM05D005159 ORTHO05D006237 1.2e-38 163.7 157 56.7
Peaxi162Scf01056g00019 Petunia axillaris HOM05D005159 ORTHO05D006237 3.6e-38 162.2 158 56.3
Duzib211G0079 Durio zibethinus HOM05D005159 ORTHO05D006237 6.1e-38 161.4 153 59.5
CsaV3_5G013180 Cucumis sativus L. HOM05D005159 ORTHO05D006237 8.0e-38 161.0 156 59.0
Solyc02g089600.3 Solanum lycopersicum HOM05D005159 ORTHO05D006237 8.0e-38 161.0 148 58.8
Hund27686 Selenicereus undatus HOM05D005159 ORTHO05D006237 1.0e-37 160.6 152 59.9
Hund27687 Selenicereus undatus HOM05D005159 ORTHO05D006237 1.0e-37 160.6 152 59.9
MELO3C020033.2 Cucumis melo HOM05D005159 ORTHO05D006237 3.0e-37 159.1 156 58.3
Sabra04G0075100 Salix brachista HOM05D005159 ORTHO05D006237 5.2e-37 158.3 153 59.5
Actinidia36292 Actinidia chinensis HOM05D005159 ORTHO05D006237 1.5e-36 156.8 99 78.8
SalBow1G7987 Salvia bowleyana HOM05D005159 ORTHO05D006237 1.5e-36 156.8 158 58.2
Potri.004G106900 Populus trichocarpa HOM05D005159 ORTHO05D006237 2.6e-36 156.0 159 56.6
AUR62016605 Chenopodium quinoa HOM05D005159 ORTHO05D006237 3.3e-36 155.6 155 57.4
TWI32G0838 Tripterygium wilfordii HOM05D005159 ORTHO05D006237 4.4e-36 155.2 155 59.4
MBI15_g38433_MAGBIO Magnolia biondii HOM05D005159 ORTHO05D006237 5.7e-36 154.8 153 58.2
COL.COLO4_37042 Corchorus olitorius HOM05D005159 ORTHO05D006237 7.5e-36 154.5 156 55.1
Sed0024356 Sechium edule HOM05D005159 ORTHO05D006237 7.5e-36 154.5 156 56.4
Sed0002827 Sechium edule HOM05D005159 ORTHO05D006237 9.7e-36 154.1 156 57.7
Phvul.008G006700 Phaseolus vulgaris HOM05D005159 ORTHO05D006237 1.3e-35 153.7 154 57.8
ClCG11G001130 Citrullus lanatus HOM05D005159 ORTHO05D006237 1.7e-35 153.3 155 56.8
Eucgr.I02096 Eucalyptus grandis HOM05D005159 ORTHO05D006237 2.8e-35 152.5 154 54.5
Medtr4g051625 Medicago truncatula HOM05D005159 ORTHO05D006237 2.8e-35 152.5 152 54.6
EL10Ac7g16490 Beta vulgaris HOM05D005159 ORTHO05D006237 3.7e-35 152.1 144 57.6
Manes.01G106500 Manihot esculenta HOM05D005159 ORTHO05D006237 3.7e-35 152.1 152 58.6
PGR004G1892 Punica granatum HOM05D005159 ORTHO05D006237 8.2e-35 151.0 137 58.4
Ca_13657_v3 Cicer arietinum L. HOM05D005159 ORTHO05D006237 1.1e-34 150.6 153 58.2
CANSAT21G0179 Cannabis sativa HOM05D005159 ORTHO05D006237 1.4e-34 150.2 160 54.4
DCAR_026285 Daucus carota HOM05D005159 ORTHO05D006237 1.4e-34 150.2 134 61.9
TPR.G37714 Trifolium pratense HOM05D005159 ORTHO05D006237 1.8e-34 149.8 152 56.6
Oeu062202.1 Olea europaea HOM05D005159 ORTHO05D006237 3.1e-34 149.1 116 66.4
MD17G1070200 Malus domestica HOM05D005159 ORTHO05D006237 5.3e-34 148.3 123 64.2
Thecc.04G145900 Theobroma cacao HOM05D005159 ORTHO05D006237 5.3e-34 148.3 135 60.0
Aa31LG9G16930 Aethionema arabicum HOM05D005159 ORTHO05D006237 7.0e-34 147.9 153 57.5
arahy.Tifrunner.gnm1.ann1.MEN3PN Arachis hypogaea HOM05D005159 ORTHO05D006237 7.0e-34 147.9 136 59.6
BcaB06g27239 Brassica carinata HOM05D005159 ORTHO05D006237 1.2e-33 147.1 154 56.5
MD09G1079700 Malus domestica HOM05D005159 ORTHO05D006237 1.2e-33 147.1 124 64.5
unitig_61.g26382 Utricularia gibba HOM05D005159 ORTHO05D006237 1.2e-33 147.1 115 65.2
Glyma.07G204700 Glycine max HOM05D005159 ORTHO05D006237 1.6e-33 146.7 152 57.9
TPR.G28602 Trifolium pratense HOM05D005159 ORTHO05D006237 2.0e-33 146.4 157 51.6
Medtr1g090650 Medicago truncatula HOM05D005159 ORTHO05D006237 2.7e-33 146.0 130 60.0
Gohir.A13G118100 Gossypium hirsutum HOM05D005159 ORTHO05D006237 3.5e-33 145.6 155 55.5
Psat7g186040 Pisum sativum HOM05D002527 ORTHO05D002865 3.5e-33 145.6 166 53.0
Ca_26327_v3 Cicer arietinum L. HOM05D005159 ORTHO05D006237 7.7e-33 144.4 153 53.6
PSO017G6426 Papaver somniferum HOM05D005159 ORTHO05D006237 1.3e-32 143.7 125 59.2
Gorai.013G136600 Gossypium raimondii HOM05D005159 ORTHO05D006237 3.8e-32 142.1 155 54.2
C06p18340 Brassica napus HOM05D005159 ORTHO05D006237 5.0e-32 141.7 155 54.8
BolC6t37046H Brassica oleracea HOM05D005159 ORTHO05D006237 5.0e-32 141.7 155 54.8
ECA240G3626 Erigeron canadensis HOM05D005159 ORTHO05D006237 8.5e-32 141.0 123 58.5
CDE02G0002 Ceratophyllum demersum HOM05D005159 ORTHO05D006237 1.1e-31 140.6 91 76.9
Gohir.D13G121900 Gossypium hirsutum HOM05D005159 ORTHO05D006237 1.1e-31 140.6 155 53.5
AL7G51700 Arabidopsis lyrata HOM05D005159 ORTHO05D006237 1.5e-31 140.2 155 54.2
BcaC02g09665 Brassica carinata HOM05D005159 ORTHO05D006237 1.5e-31 140.2 121 62.0
C04p45340 Brassica napus HOM05D005159 ORTHO05D006237 1.5e-31 140.2 121 62.0
BolC4t26116H Brassica oleracea HOM05D005159 ORTHO05D006237 1.5e-31 140.2 121 62.0
BraA04t16828Z Brassica rapa HOM05D005159 ORTHO05D006237 1.5e-31 140.2 121 62.0
Thhalv10028147m.g Eutrema salsugineum HOM05D005159 ORTHO05D006237 1.5e-31 140.2 155 54.2
Sp7g03200 Schrenkiella parvula HOM05D005159 ORTHO05D006237 1.5e-31 140.2 124 60.5
Ah.08g217340 Amaranthus hybridus HOM05D005159 ORTHO05D006237 1.9e-31 139.8 125 59.2
Rhsim08G0081100 Rhododendron simsii HOM05D005159 ORTHO05D006237 4.2e-31 138.7 154 58.4
A04p11610 Brassica napus HOM05D005159 ORTHO05D006237 5.5e-31 138.3 121 61.2
Ah.15g094970 Amaranthus hybridus HOM05D005159 ORTHO05D006237 7.2e-31 137.9 153 52.9
FvH4_6g45790 Fragaria vesca HOM05D005159 ORTHO05D006237 7.2e-31 137.9 133 58.6
FAN09G0042 Fragaria x ananassa HOM05D005159 ORTHO05D006237 7.2e-31 137.9 133 58.6
Psat6g166480 Pisum sativum HOM05D005159 ORTHO05D006237 7.2e-31 137.9 133 57.9
AT5G38720 Arabidopsis thaliana HOM05D005159 ORTHO05D006237 1.6e-30 136.7 155 52.3
AUR62011452 Chenopodium quinoa HOM05D005159 ORTHO05D006237 2.1e-30 136.3 192 46.4
Atru.chr11.1725 Acer truncatum HOM05D005159 ORTHO05D006237 4.7e-30 135.2 204 44.6
CiPaw.03G007500 Carya illinoinensis HOM05D005159 ORTHO05D006237 6.1e-30 134.8 203 43.8
HanXRQChr03g0078031 Helianthus annuus HOM05D005159 ORTHO05D006237 6.1e-30 134.8 154 52.6
Lsat_1_v5_gn_8_24161 Lactuca sativa HOM05D005159 ORTHO05D006237 6.1e-30 134.8 140 54.3
PSO478G0642 Papaver somniferum HOM05D005159 ORTHO05D006237 1.0e-29 134.0 127 55.9
vmacro18090 Vaccinium macrocarpon HOM05D005159 ORTHO05D006237 1.0e-29 134.0 155 56.8
Carub.0007s3714 Capsella rubella HOM05D005159 ORTHO05D006237 1.4e-29 133.7 135 53.3
arahy.Tifrunner.gnm1.ann1.VE7QKQ Arachis hypogaea HOM05D005159 ORTHO05D006237 1.8e-29 133.3 136 54.4
Medtr8g085800 Medicago truncatula HOM05D005159 ORTHO05D006237 2.3e-29 132.9 111 63.1
Haze_14082 Corylus avellana HOM05D005159 ORTHO05D006237 4.0e-29 132.1 202 43.1
Glyma.13G171200 Glycine max HOM05D005159 ORTHO05D006237 4.0e-29 132.1 91 71.4
HPP92_015315 Vanilla planifolia HOM05D005159 ORTHO05D006237 4.0e-29 132.1 152 51.3
Aqoxy3G00614 Aquilegia oxysepala HOM05D005159 ORTHO05D006237 6.8e-29 131.3 154 51.9
QL02p054338 Quercus lobata HOM05D005159 ORTHO05D006237 3.4e-28 129.0 91 71.4
Os02g0728700 Oryza sativa ssp. japonica HOM05D005159 ORTHO05D006237 4.4e-28 128.6 130 55.4
Lj7A7T32 Lonicera japonica HOM05D005159 ORTHO05D006237 2.2e-27 126.3 138 57.2
FAN02G2008 Fragaria x ananassa HOM05D005159 ORTHO05D006237 4.1e-26 122.1 203 43.3
FAN05G5180 Fragaria x ananassa HOM05D005159 ORTHO05D006237 7.0e-26 121.3 136 53.7
RcHm_v2.0_Chr2g0163971 Rosa chinensis HOM05D005159 ORTHO05D006237 1.6e-25 120.2 201 43.3
Sopen02g034320 Solanum pennellii HOM05D005159 ORTHO05D006237 2.7e-25 119.4 158 46.2
AUR62013504 Chenopodium quinoa HOM05D000258 ORTHO05D006237 3.5e-25 119.0 88 67.0
VMungo1383G3720 Vigna mungo HOM05D005159 ORTHO05D006237 3.5e-25 119.0 148 49.3
AUR62026768 Chenopodium quinoa HOM05D005159 ORTHO05D006237 4.5e-25 118.6 91 62.6
Zm00001eb253420 Zea mays HOM05D005159 ORTHO05D006237 5.9e-25 118.2 147 49.0
ATR0691G244 Amborella trichopoda HOM05D005159 ORTHO05D006237 8.5e-24 114.4 151 48.3
Lalb_Chr18g0059201 Lupinus albus HOM05D005159 ORTHO05D006237 2.5e-23 112.8 152 46.1
Nn8g41096 Nelumbo nucifera HOM05D005159 ORTHO05D006237 5.5e-23 111.7 155 47.1
Lj6g0020881 Lotus japonicus HOM05D005159 ORTHO05D006237 7.2e-23 111.3 152 47.4
Phvul.001G061500 Phaseolus vulgaris HOM05D005159 ORTHO05D006237 2.1e-22 109.8 152 47.4
TAR629G0746 Trochodendron aralioides HOM05D005159 ORTHO05D006237 2.1e-22 109.8 135 50.4
BcaC08g44401 Brassica carinata HOM05D005159 ORTHO05D006237 3.6e-22 109.0 93 61.3
SEGI_21798 Sequoiadendron giganteum HOM05D005159 ORTHO05D006237 4.7e-22 108.6 91 61.5
FAN14G1445 Fragaria x ananassa HOM05D005159 ORTHO05D006237 2.4e-18 96.3 73 68.5
Mapoly0058s0026 Marchantia polymorpha HOM05D005159 ORTHO05D006237 2.0e-17 93.2 112 45.5
arahy.Tifrunner.gnm1.ann1.3J3UL0 Arachis hypogaea HOM05D005159 ORTHO05D006237 2.3e-16 89.7 91 56.0
SMO196G0176 Selaginella moellendorffii HOM05D005159 ORTHO05D006237 5.0e-16 88.6 91 50.5
SMO234G0023 Selaginella moellendorffii HOM05D005159 ORTHO05D006237 6.6e-16 88.2 91 50.5
Pp3c10_24110 Physcomitrium patens HOM05D005159 ORTHO05D006237 1.1e-15 87.4 93 51.6
AagrBONN_evm.TU.Sc2ySwM_369.363 Anthoceros agrestis HOM05D005159 ORTHO05D006237 2.3e-13 79.7 90 50.0
arahy.Tifrunner.gnm1.ann1.YDKP0V Arachis hypogaea HOM05D005159 ORTHO05D006237 8.9e-13 77.8 88 53.4
CARHR291790 Cardamine hirsuta HOM05D005159 ORTHO05D006237 7.0e-10 68.2 116 40.5
Oeu062205.1 Olea europaea HOM05D005159 ORTHO05D006237 2.0e-09 66.6 85 49.4
Dinv34878 Davidia involucrata HOM05D005159 ORTHO05D006237 1.7e-08 63.5 52 65.4
MCO13G254 Micromonas commoda HOM05D005159 ORTHO05D006237 3.3e-07 59.3 91 41.8
CBR_g4867 Chara braunii HOM05D005159 ORTHO05D006237 6.2e-06 55.1 58 55.2


User provided reference genes

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