Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0028432 Camellia sinensis var. sinensis HOM05D001384 ORTHO05D001215 9.9e-19 96.3 69 100.0
CSS0002673 Camellia sinensis var. sinensis HOM05D001384 ORTHO05D001215 1.0e-15 86.3 67 95.5
CSS0049312 Camellia sinensis var. sinensis HOM05D001384 ORTHO05D001215 1.0e-15 86.3 67 95.5
Thecc.09G095500 Theobroma cacao HOM05D001384 ORTHO05D001215 2.2e-10 68.6 67 61.2
GSVIVG01015262001 Vitis vinifera HOM05D001384 ORTHO05D001215 2.9e-10 68.2 68 76.5
Haze_25860 Corylus avellana HOM05D001384 ORTHO05D001215 2.4e-09 65.1 71 70.4
TAR626G0551 Trochodendron aralioides HOM05D001384 ORTHO05D001215 3.2e-09 64.7 67 58.2
Prupe.7G215700 Prunus persica HOM05D001384 ORTHO05D001215 4.2e-09 64.3 67 58.2
MD02G1072000 Malus domestica HOM05D001384 ORTHO05D001215 1.2e-08 62.8 67 58.2
Glyma.01G004600 Glycine max HOM05D001384 ORTHO05D001215 1.6e-08 62.4 67 62.7
Glyma.07G127200 Glycine max HOM05D001384 ORTHO05D001215 1.6e-08 62.4 67 58.2
Lj2g0025499 Lotus japonicus HOM05D001384 ORTHO05D001215 1.6e-08 62.4 67 62.7
COL.COLO4_18260 Corchorus olitorius HOM05D001384 ORTHO05D001215 3.5e-08 61.2 57 63.2
DCAR_012014 Daucus carota HOM05D001384 ORTHO05D001215 7.9e-08 60.1 67 67.2
Migut.J01071 Erythranthe guttata HOM05D001384 ORTHO05D001215 1.0e-07 59.7 67 56.7
MD15G1201800 Malus domestica HOM05D001384 ORTHO05D001215 1.3e-07 59.3 67 55.2
Psat1g048920 Pisum sativum HOM05D001384 ORTHO05D001215 1.8e-07 58.9 67 62.7
Lalb_Chr24g0393961 Lupinus albus HOM05D001384 ORTHO05D001215 5.1e-07 57.4 67 55.2
Nitab4.5_0000540g0040 Nicotiana tabacum HOM05D001384 ORTHO05D001215 6.7e-07 57.0 67 55.2
FAN23G2194 Fragaria x ananassa HOM05D001384 ORTHO05D001215 8.7e-07 56.6 68 52.9
Peaxi162Scf00498g00030 Petunia axillaris HOM05D001384 ORTHO05D001215 8.7e-07 56.6 67 53.7
arahy.Tifrunner.gnm1.ann1.3Z4R3A Arachis hypogaea HOM05D001384 ORTHO05D001215 1.1e-06 56.2 67 50.7
arahy.Tifrunner.gnm1.ann1.TI6HCL Arachis hypogaea HOM05D001384 ORTHO05D001215 1.1e-06 56.2 67 50.7
FvH4_1g06710 Fragaria vesca HOM05D001384 ORTHO05D001215 1.1e-06 56.2 68 52.9
Phvul.004G173101 Phaseolus vulgaris HOM05D001384 ORTHO05D001215 1.1e-06 56.2 67 52.2
RcHm_v2.0_Chr2g0092451 Rosa chinensis HOM05D001384 ORTHO05D001215 1.9e-06 55.5 68 51.5
RcHm_v2.0_Chr1g0380071 Rosa chinensis HOM05D001384 ORTHO05D001215 2.5e-06 55.1 58 48.3
Medtr6g090535 Medicago truncatula HOM05D001384 ORTHO05D001215 7.4e-06 53.5 67 52.2
Aqoxy5G04117 Aquilegia oxysepala HOM05D001384 ORTHO05D001215 9.6e-06 53.1 67 62.7
Cc06_g10880 Coffea canephora HOM05D001384 ORTHO05D001215 9.6e-06 53.1 67 62.7
MBI01_g10310_MAGBIO Magnolia biondii HOM05D001384 ORTHO05D001215 9.6e-06 53.1 67 61.2


User provided reference genes

Program Settings