Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0028407 Camellia sinensis var. sinensis HOM05D006592 ORTHO05D008122 1.9e-150 535.8 274 100.0
CSS0043715 Camellia sinensis var. sinensis HOM05D006592 ORTHO05D008122 1.2e-136 490.0 257 96.9
Dinv37459 Davidia involucrata HOM05D006592 ORTHO05D008122 1.6e-112 409.8 265 78.9
TAR622G1375 Trochodendron aralioides HOM05D006592 ORTHO05D008122 1.3e-106 390.2 265 74.3
Actinidia29329 Actinidia chinensis HOM05D006592 ORTHO05D008122 1.7e-106 389.8 261 76.6
Hma1.2p1_1046F.1_g251540 Hydrangea macrophylla HOM05D006592 ORTHO05D008122 2.9e-106 389.0 265 72.8
Hma1.2p1_1256F.1_g270670 Hydrangea macrophylla HOM05D006592 ORTHO05D008122 4.2e-105 385.2 265 72.5
Rhsim07G0174700 Rhododendron simsii HOM05D006592 ORTHO05D008122 4.2e-105 385.2 263 73.4
vmacro05080 Vaccinium macrocarpon HOM05D006592 ORTHO05D008122 3.6e-104 382.1 263 71.9
QL02p100032 Quercus lobata HOM05D006592 ORTHO05D008122 1.4e-103 380.2 266 71.8
Prupe.2G060600 Prunus persica HOM05D006592 ORTHO05D008122 2.8e-101 372.5 265 70.6
Nn1g09214 Nelumbo nucifera HOM05D006592 ORTHO05D008122 1.4e-100 370.2 266 70.7
Sabra03G0072100 Salix brachista HOM05D006592 ORTHO05D008122 1.4e-100 370.2 266 69.9
Potri.003G105100 Populus trichocarpa HOM05D006592 ORTHO05D008122 2.7e-99 365.9 261 71.3
Haze_08005 Corylus avellana HOM05D006592 ORTHO05D008122 7.7e-99 364.4 265 69.8
FAN11G2031 Fragaria x ananassa HOM05D006592 ORTHO05D008122 1.7e-98 363.2 265 69.8
FvH4_3g41920 Fragaria vesca HOM05D006592 ORTHO05D008122 5.0e-98 361.7 265 69.4
FAN25G1190 Fragaria x ananassa HOM05D006592 ORTHO05D008122 8.6e-98 360.9 265 69.4
FAN21G3043 Fragaria x ananassa HOM05D006592 ORTHO05D008122 1.1e-97 360.5 265 69.1
Manes.17G005500 Manihot esculenta HOM05D006592 ORTHO05D008122 1.9e-97 359.8 260 69.6
Aqoxy7G04139 Aquilegia oxysepala HOM05D006592 ORTHO05D008122 3.2e-97 359.0 260 70.0
CiPaw.11G105000 Carya illinoinensis HOM05D006592 ORTHO05D008122 2.1e-96 356.3 266 68.0
DCAR_028262 Daucus carota HOM05D006592 ORTHO05D008122 2.8e-96 355.9 265 65.3
MD07G1026800 Malus domestica HOM05D006592 ORTHO05D008122 2.8e-96 355.9 271 67.5
Atru.chr6.2117 Acer truncatum HOM05D006592 ORTHO05D008122 4.7e-96 355.1 257 71.2
GSVIVG01036935001 Vitis vinifera HOM05D006592 ORTHO05D008122 1.0e-95 354.0 258 69.8
RcHm_v2.0_Chr1g0331171 Rosa chinensis HOM05D006592 ORTHO05D008122 1.4e-95 353.6 265 68.3
Psat4g109400 Pisum sativum HOM05D006592 ORTHO05D008122 1.8e-95 353.2 259 67.6
TPR.G16815 Trifolium pratense HOM05D006592 ORTHO05D008122 8.8e-95 350.9 259 66.8
Medtr8g071820 Medicago truncatula HOM05D006592 ORTHO05D008122 1.2e-94 350.5 259 66.8
Duzib084G0624 Durio zibethinus HOM05D006592 ORTHO05D008122 3.4e-94 349.0 262 70.2
Glyma.16G106500 Glycine max HOM05D006592 ORTHO05D008122 4.4e-94 348.6 258 66.7
arahy.Tifrunner.gnm1.ann1.35U8WI Arachis hypogaea HOM05D006592 ORTHO05D008122 5.7e-94 348.2 261 66.7
Glyma.16G075200 Glycine max HOM05D006592 ORTHO05D008122 5.7e-94 348.2 260 65.8
HanXRQChr13g0411871 Helianthus annuus HOM05D006592 ORTHO05D008122 5.7e-94 348.2 265 63.4
Ca_22475_v3 Cicer arietinum L. HOM05D006592 ORTHO05D008122 7.5e-94 347.8 259 66.0
PSO782G0843 Papaver somniferum HOM05D006592 ORTHO05D008122 7.5e-94 347.8 265 66.8
arahy.Tifrunner.gnm1.ann1.6CV8VS Arachis hypogaea HOM05D006592 ORTHO05D008122 1.3e-93 347.1 261 66.3
Phvul.003G276900 Phaseolus vulgaris HOM05D006592 ORTHO05D008122 1.7e-93 346.7 258 67.1
MELO3C010544.2 Cucumis melo HOM05D006592 ORTHO05D008122 2.8e-93 345.9 242 69.4
PSO063G4459 Papaver somniferum HOM05D006592 ORTHO05D008122 3.7e-93 345.5 265 66.4
PGR042G2051 Punica granatum HOM05D006592 ORTHO05D008122 6.3e-93 344.7 271 63.5
ClCG11G016240 Citrullus lanatus HOM05D006592 ORTHO05D008122 1.8e-92 343.2 262 64.9
Eucgr.E01202 Eucalyptus grandis HOM05D006592 ORTHO05D008122 3.1e-92 342.4 262 66.4
Gorai.004G175600 Gossypium raimondii HOM05D006592 ORTHO05D008122 9.2e-92 340.9 241 70.5
CsaV3_4G037940 Cucumis sativus L. HOM05D006592 ORTHO05D008122 1.6e-91 340.1 262 64.5
Lalb_Chr05g0229391 Lupinus albus HOM05D006592 ORTHO05D008122 2.7e-91 339.3 260 64.6
Gohir.D08G168300 Gossypium hirsutum HOM05D006592 ORTHO05D008122 7.8e-91 337.8 241 69.7
Thecc.03G323800 Theobroma cacao HOM05D006592 ORTHO05D008122 1.7e-90 336.7 264 66.7
Nitab4.5_0000063g0390 Nicotiana tabacum HOM05D006592 ORTHO05D008122 2.9e-90 335.9 267 65.2
Peaxi162Scf00045g01236 Petunia axillaris HOM05D006592 ORTHO05D008122 2.9e-90 335.9 265 65.7
COL.COLO4_16712 Corchorus olitorius HOM05D006592 ORTHO05D008122 5.0e-90 335.1 264 65.2
Lj8A380T21 Lonicera japonica HOM05D006592 ORTHO05D008122 1.5e-89 333.6 250 67.2
Nitab4.5_0004477g0030 Nicotiana tabacum HOM05D006592 ORTHO05D008122 1.5e-89 333.6 265 65.3
Cc00_g08640 Coffea canephora HOM05D006592 ORTHO05D008122 1.9e-89 333.2 264 62.1
SalBow8G1786 Salvia bowleyana HOM05D006592 ORTHO05D008122 2.5e-89 332.8 260 62.7
SalBow8G4832 Salvia bowleyana HOM05D006592 ORTHO05D008122 5.6e-89 331.6 262 61.8
TWI60G0674 Tripterygium wilfordii HOM05D006592 ORTHO05D008122 5.6e-89 331.6 254 66.1
ATR0829G075 Amborella trichopoda HOM05D006592 ORTHO05D008122 1.2e-88 330.5 262 64.9
Migut.E01392 Erythranthe guttata HOM05D006592 ORTHO05D008122 2.1e-88 329.7 265 63.4
CDE11G0624 Ceratophyllum demersum HOM05D006592 ORTHO05D008122 1.4e-87 327.0 243 65.4
Oeu028120.2 Olea europaea HOM05D006592 ORTHO05D008122 5.2e-87 325.1 270 64.1
BolC7t41947H Brassica oleracea HOM05D006592 ORTHO05D008122 1.2e-86 323.9 274 59.5
BcaB03g13796 Brassica carinata HOM05D006592 ORTHO05D008122 3.4e-86 322.4 271 59.8
Lj4g0008520 Lotus japonicus HOM05D006592 ORTHO05D008122 3.4e-86 322.4 248 63.7
CAN.G561.14 Capsicum annuum HOM05D006592 ORTHO05D008122 7.5e-86 321.2 265 62.3
Thhalv10007328m.g Eutrema salsugineum HOM05D006592 ORTHO05D008122 7.5e-86 321.2 270 59.3
Os04g0602200 Oryza sativa ssp. japonica HOM05D006592 ORTHO05D008122 7.5e-86 321.2 261 59.4
BraA07t28736Z Brassica rapa HOM05D006592 ORTHO05D008122 9.8e-86 320.9 274 58.8
Sc01g0005980 Simmondsia chinensis HOM05D006592 ORTHO05D008122 9.8e-86 320.9 272 59.6
EL10Ac5g11887 Beta vulgaris HOM05D006592 ORTHO05D008122 1.3e-85 320.5 240 64.2
C07p14480 Brassica napus HOM05D006592 ORTHO05D008122 1.3e-85 320.5 274 58.8
AL1G49640 Arabidopsis lyrata HOM05D006592 ORTHO05D008122 1.7e-85 320.1 255 62.4
PGSC0003DMG400024141 Solanum tuberosum HOM05D006592 ORTHO05D008122 2.2e-85 319.7 258 64.0
A07p09410 Brassica napus HOM05D006592 ORTHO05D008122 2.9e-85 319.3 274 58.8
CARHR030900 Cardamine hirsuta HOM05D006592 ORTHO05D008122 4.9e-85 318.5 270 59.6
AUR62007438 Chenopodium quinoa HOM05D006592 ORTHO05D008122 4.9e-85 318.5 240 64.2
Zm00001eb430350 Zea mays HOM05D006592 ORTHO05D008122 4.9e-85 318.5 244 63.9
Carub.0001s2983 Capsella rubella HOM05D006592 ORTHO05D008122 6.4e-85 318.2 270 59.6
Sp1g27210 Schrenkiella parvula HOM05D006592 ORTHO05D008122 8.3e-85 317.8 270 58.1
Solyc08g005860.3 Solanum lycopersicum HOM05D006592 ORTHO05D008122 1.8e-84 316.6 262 62.2
THA.LOC104814375 Tarenaya hassleriana HOM05D006592 ORTHO05D008122 5.4e-84 315.1 266 60.2
Lsat_1_v5_gn_5_55220 Lactuca sativa HOM05D006592 ORTHO05D008122 9.2e-84 314.3 241 62.2
AT1G31410 Arabidopsis thaliana HOM05D006592 ORTHO05D008122 1.2e-83 313.9 255 61.2
Sopen08g001820 Solanum pennellii HOM05D006592 ORTHO05D008122 3.5e-83 312.4 262 61.8
Hund14317 Selenicereus undatus HOM05D006592 ORTHO05D008122 2.3e-82 309.7 267 59.2
SGA_v2.0_scaffold144G35824 Striga asiatica HOM05D006592 ORTHO05D008122 4.3e-81 305.4 257 59.1
Ah.02g117360 Amaranthus hybridus HOM05D006592 ORTHO05D008122 1.6e-80 303.5 247 60.3
Aa31LG2G14540 Aethionema arabicum HOM05D006592 ORTHO05D008122 3.6e-80 302.4 273 59.0
ECA240G2178 Erigeron canadensis HOM05D006592 ORTHO05D008122 2.3e-79 299.7 217 65.4
VMungo0251G2096 Vigna mungo HOM05D006592 ORTHO05D008122 3.1e-79 299.3 215 69.3
unitig_899.g15474 Utricularia gibba HOM05D006592 ORTHO05D008122 2.7e-75 286.2 240 59.6
HPP92_015141 Vanilla planifolia HOM05D006592 ORTHO05D008122 4.4e-70 268.9 170 72.9
SMO244G0026 Selaginella moellendorffii HOM05D006592 ORTHO05D008122 4.1e-68 262.3 234 53.4
AagrBONN_evm.TU.Sc2ySwM_344.4668 Anthoceros agrestis HOM05D006592 ORTHO05D008122 5.2e-63 245.4 304 42.1
Pp3c1_19230 Physcomitrium patens HOM05D006592 ORTHO05D008122 7.6e-62 241.5 215 55.3
Mapoly0006s0240 Marchantia polymorpha HOM05D006592 ORTHO05D008122 4.1e-60 235.7 275 45.1
AUR62027300 Chenopodium quinoa HOM05D006592 ORTHO05D008122 1.6e-59 233.8 237 51.1
CBR_g19872 Chara braunii HOM05D006592 ORTHO05D008122 1.3e-53 214.2 174 56.3
CBR_g37675 Chara braunii HOM05D006592 ORTHO05D008122 1.4e-52 210.7 174 55.7
Gohir.A08G147100 Gossypium hirsutum HOM05D006592 ORTHO05D008122 6.2e-48 195.3 117 78.6
Cpa.g.sc137.29 Carica papaya HOM05D006592 ORTHO05D008122 4.0e-39 166.0 110 72.7
MBI04_g30774_MAGBIO Magnolia biondii HOM05D006592 ORTHO05D008122 2.1e-35 153.7 182 51.1
MBI14_g31659_MAGBIO Magnolia biondii HOM05D006592 ORTHO05D008122 1.5e-33 147.5 107 69.2
Sed0001244 Sechium edule HOM05D006592 ORTHO05D008122 8.2e-32 141.7 150 50.0
Cre06.g292100 Chlamydomonas reinhardtii HOM05D006592 ORTHO05D008122 5.8e-30 135.6 178 40.4
MBI02_g32478_MAGBIO Magnolia biondii HOM05D006592 ORTHO05D008122 5.5e-28 129.0 91 70.3
SEGI_06764 Sequoiadendron giganteum HOM05D006592 ORTHO05D008122 1.6e-27 127.5 137 46.0
MCO09G637 Micromonas commoda HOM05D006592 ORTHO05D008122 6.3e-24 115.5 267 30.0
Zm00001eb071790 Zea mays HOM05D006592 ORTHO05D008122 2.0e-22 110.5 213 36.2
PRCOL_00001501 Prasinoderma coloniale HOM05D006592 ORTHO05D008122 3.6e-19 99.8 244 32.4
Dinv37458 Davidia involucrata HOM05D000040 ORTHO05D000267 1.3e-16 91.3 65 72.3
AagrBONN_evm.TU.Sc2ySwM_117.3387 Anthoceros agrestis HOM05D006592 ORTHO05D008122 4.5e-14 82.8 142 33.8


User provided reference genes

Program Settings