Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0018046 Camellia sinensis var. sinensis HOM05D000461 ORTHO05D006079 7.1e-139 497.3 256 100.0
CSS0028400 Camellia sinensis var. sinensis HOM05D000461 ORTHO05D006079 7.1e-139 497.3 256 100.0
Actinidia22491 Actinidia chinensis HOM05D000461 ORTHO05D006079 1.8e-118 429.5 256 85.9
Actinidia15394 Actinidia chinensis HOM05D000461 ORTHO05D006079 1.5e-117 426.4 256 85.5
Dinv31816 Davidia involucrata HOM05D000461 ORTHO05D006079 5.5e-115 417.9 251 84.9
Rhsim07G0244900 Rhododendron simsii HOM05D000461 ORTHO05D006079 8.2e-111 404.1 255 80.8
vmacro04330 Vaccinium macrocarpon HOM05D000461 ORTHO05D006079 1.9e-107 392.9 256 78.5
Atru.chr13.348 Acer truncatum HOM05D000461 ORTHO05D006079 9.4e-107 390.6 256 77.0
QL02p010828 Quercus lobata HOM05D000461 ORTHO05D006079 4.0e-105 385.2 254 77.6
Dinv39493 Davidia involucrata HOM05D000461 ORTHO05D006079 5.2e-105 384.8 234 85.0
Cfa013913 Carpinus fangiana HOM05D000461 ORTHO05D006079 7.5e-104 380.9 250 78.8
Haze_22598 Corylus avellana HOM05D000461 ORTHO05D006079 1.3e-103 380.2 248 79.0
Cpa.g.sc140.26 Carica papaya HOM05D000461 ORTHO05D006079 1.8e-102 376.3 256 75.0
Prupe.1G370000 Prunus persica HOM05D000461 ORTHO05D006079 1.8e-102 376.3 254 76.0
Migut.C00798 Erythranthe guttata HOM05D000461 ORTHO05D006079 2.4e-102 375.9 250 77.2
Thecc.08G038400 Theobroma cacao HOM05D000461 ORTHO05D006079 4.1e-102 375.2 247 77.7
Lj4C791T6 Lonicera japonica HOM05D000461 ORTHO05D006079 9.1e-102 374.0 258 76.7
SalBow7G3342 Salvia bowleyana HOM05D000461 ORTHO05D006079 1.6e-101 373.2 254 76.0
CiPaw.08G063400 Carya illinoinensis HOM05D000461 ORTHO05D006079 1.0e-100 370.5 254 76.4
COL.COLO4_26189 Corchorus olitorius HOM05D000461 ORTHO05D006079 1.3e-100 370.2 249 75.5
MD08G1017300 Malus domestica HOM05D000461 ORTHO05D006079 1.3e-100 370.2 254 74.0
Duzib041G0375 Durio zibethinus HOM05D000461 ORTHO05D006079 1.7e-100 369.8 256 76.2
RcHm_v2.0_Chr6g0302221 Rosa chinensis HOM05D000461 ORTHO05D006079 1.7e-100 369.8 254 75.2
Glyma.14G216900 Glycine max HOM05D000461 ORTHO05D006079 3.8e-100 368.6 253 73.9
MD15G1016200 Malus domestica HOM05D000461 ORTHO05D006079 6.5e-100 367.9 254 73.6
Duzib116G0720 Durio zibethinus HOM05D000461 ORTHO05D006079 8.5e-100 367.5 250 76.8
Potri.002G027100 Populus trichocarpa HOM05D000461 ORTHO05D006079 1.1e-99 367.1 256 73.0
Ciclev10000011m.g Citrus clementina HOM05D000461 ORTHO05D006079 2.5e-99 365.9 254 74.0
Oeu046249.2 Olea europaea HOM05D000461 ORTHO05D006079 4.2e-99 365.2 253 75.9
Cc10_g02020 Coffea canephora HOM05D000461 ORTHO05D006079 5.5e-99 364.8 254 75.6
FvH4_2g39110 Fragaria vesca HOM05D000461 ORTHO05D006079 5.5e-99 364.8 254 73.6
Manes.05G151700 Manihot esculenta HOM05D000461 ORTHO05D006079 5.5e-99 364.8 255 72.5
FAN27G0733 Fragaria x ananassa HOM05D000461 ORTHO05D006079 7.2e-99 364.4 254 73.6
Lalb_Chr14g0369711 Lupinus albus HOM05D000461 ORTHO05D006079 1.2e-98 363.6 253 73.5
Phvul.001G009300 Phaseolus vulgaris HOM05D000461 ORTHO05D006079 1.6e-98 363.2 253 73.5
CAN.G851.3 Capsicum annuum HOM05D000461 ORTHO05D006079 2.1e-98 362.8 254 73.2
Glyma.17G255500 Glycine max HOM05D000461 ORTHO05D006079 6.1e-98 361.3 253 72.7
Peaxi162Scf00287g00141 Petunia axillaris HOM05D000461 ORTHO05D006079 6.1e-98 361.3 254 72.8
ClCG08G014460 Citrullus lanatus HOM05D000461 ORTHO05D006079 1.0e-97 360.5 254 72.4
Sabra05G0181600 Salix brachista HOM05D000461 ORTHO05D006079 1.0e-97 360.5 254 72.0
FAN20G0079 Fragaria x ananassa HOM05D000461 ORTHO05D006079 1.4e-97 360.1 254 72.8
CsaV3_2G029330 Cucumis sativus L. HOM05D000461 ORTHO05D006079 1.8e-97 359.8 254 72.4
MELO3C010993.2 Cucumis melo HOM05D000461 ORTHO05D006079 2.3e-97 359.4 254 72.0
Potri.005G235400 Populus trichocarpa HOM05D000461 ORTHO05D006079 2.3e-97 359.4 256 72.3
PGSC0003DMG402003767 Solanum tuberosum HOM05D000461 ORTHO05D006079 3.0e-97 359.0 254 72.8
FAN15G1130 Fragaria x ananassa HOM05D000461 ORTHO05D006079 4.0e-97 358.6 254 72.4
Nn6g32259 Nelumbo nucifera HOM05D000461 ORTHO05D006079 8.8e-97 357.5 258 74.0
HanXRQChr16g0501691 Helianthus annuus HOM05D000461 ORTHO05D006079 1.2e-96 357.1 250 72.4
Nn5g29246 Nelumbo nucifera HOM05D000461 ORTHO05D006079 1.2e-96 357.1 255 73.7
Ah.05g171870 Amaranthus hybridus HOM05D000461 ORTHO05D006079 2.0e-96 356.3 254 73.2
AUR62014416 Chenopodium quinoa HOM05D000461 ORTHO05D006079 2.0e-96 356.3 253 73.1
AUR62019152 Chenopodium quinoa HOM05D000461 ORTHO05D006079 4.4e-96 355.1 253 73.1
Sed0013065 Sechium edule HOM05D000461 ORTHO05D006079 4.4e-96 355.1 254 72.8
Sopen04g034720 Solanum pennellii HOM05D000461 ORTHO05D006079 4.4e-96 355.1 254 72.0
EL10Ac1g00444 Beta vulgaris HOM05D000461 ORTHO05D006079 5.7e-96 354.8 256 71.9
Lj1g0004463 Lotus japonicus HOM05D000461 ORTHO05D006079 9.8e-96 354.0 249 73.1
Lj5g0007621 Lotus japonicus HOM05D000461 ORTHO05D006079 9.8e-96 354.0 253 71.5
ECA232G1887 Erigeron canadensis HOM05D000461 ORTHO05D006079 1.7e-95 353.2 250 73.2
Lalb_Chr22g0354441 Lupinus albus HOM05D000461 ORTHO05D006079 3.7e-95 352.1 254 73.2
Solyc04g081100.3 Solanum lycopersicum HOM05D000461 ORTHO05D006079 3.7e-95 352.1 254 71.3
Gorai.005G110900 Gossypium raimondii HOM05D000461 ORTHO05D006079 1.4e-94 350.1 254 74.4
Medtr1g023510 Medicago truncatula HOM05D000461 ORTHO05D006079 1.8e-94 349.7 253 72.3
Gohir.A03G080700 Gossypium hirsutum HOM05D000461 ORTHO05D006079 2.4e-94 349.4 253 74.3
Sabra02G0021300 Salix brachista HOM05D000461 ORTHO05D006079 3.1e-94 349.0 298 63.4
MSTRG.1217 Avicennia marina HOM05D000461 ORTHO05D006079 4.1e-94 348.6 250 72.4
Gohir.A05G373900 Gossypium hirsutum HOM05D000461 ORTHO05D006079 1.2e-93 347.1 256 73.0
Gohir.D02G097300 Gossypium hirsutum HOM05D000461 ORTHO05D006079 1.2e-93 347.1 253 74.3
Gohir.D04G041600 Gossypium hirsutum HOM05D000461 ORTHO05D006079 1.2e-93 347.1 256 73.0
Manes.18G016800 Manihot esculenta HOM05D000461 ORTHO05D006079 2.0e-93 346.3 254 70.1
TPR.G34342 Trifolium pratense HOM05D000461 ORTHO05D006079 2.0e-93 346.3 251 72.1
Gorai.012G046900 Gossypium raimondii HOM05D000461 ORTHO05D006079 1.7e-92 343.2 254 72.8
TWI56G0448 Tripterygium wilfordii HOM05D000461 ORTHO05D006079 1.7e-92 343.2 256 70.3
Sed0010278 Sechium edule HOM05D000461 ORTHO05D006079 2.5e-91 339.3 255 70.2
Psat5g014880 Pisum sativum HOM05D000461 ORTHO05D006079 3.3e-91 339.0 260 68.8
Psat6g005040 Pisum sativum HOM05D000461 ORTHO05D006079 1.2e-90 337.0 254 70.9
Medtr3g113170 Medicago truncatula HOM05D000461 ORTHO05D006079 3.6e-90 335.5 250 69.2
VMungo0647G1359 Vigna mungo HOM05D000461 ORTHO05D006079 3.0e-89 332.4 234 72.2
Aqoxy5G02511 Aquilegia oxysepala HOM05D000461 ORTHO05D006079 2.8e-87 325.9 252 67.5
arahy.Tifrunner.gnm1.ann1.26R1CG Arachis hypogaea HOM05D000461 ORTHO05D006079 1.4e-86 323.6 234 73.1
arahy.Tifrunner.gnm1.ann1.VSCY1A Arachis hypogaea HOM05D000461 ORTHO05D006079 1.4e-86 323.6 234 73.1
PGR083G1208 Punica granatum HOM05D000461 ORTHO05D006079 1.8e-86 323.2 249 69.5
TAR381G1498 Trochodendron aralioides HOM05D000461 ORTHO05D006079 3.1e-86 322.4 257 67.7
PSO675G7473 Papaver somniferum HOM05D000461 ORTHO05D006079 4.5e-85 318.5 256 66.0
HanXRQChr09g0269691 Helianthus annuus HOM05D000461 ORTHO05D006079 2.3e-84 316.2 253 67.2
PSO541G0357 Papaver somniferum HOM05D000461 ORTHO05D006079 5.0e-84 315.1 256 65.6
Lsat_1_v5_gn_4_115701 Lactuca sativa HOM05D000461 ORTHO05D006079 6.6e-84 314.7 252 69.8
Aqoxy6G02345 Aquilegia oxysepala HOM05D000461 ORTHO05D006079 4.3e-83 312.0 252 63.9
TAR625G0186 Trochodendron aralioides HOM05D000461 ORTHO05D006079 1.6e-82 310.1 254 66.9
Hund26862 Selenicereus undatus HOM05D000461 ORTHO05D006079 2.8e-82 309.3 238 71.0
Sp7g14830 Schrenkiella parvula HOM05D000461 ORTHO05D006079 3.6e-82 308.9 258 64.7
Nitab4.5_0005567g0020 Nicotiana tabacum HOM05D000461 ORTHO05D006079 1.0e-81 307.4 253 64.8
Thhalv10024204m.g Eutrema salsugineum HOM05D000461 ORTHO05D006079 1.4e-81 307.0 260 63.5
SGA_v2.0_scaffold92G28283 Striga asiatica HOM05D000461 ORTHO05D006079 3.0e-81 305.8 256 64.8
Aa31sc185G80 Aethionema arabicum HOM05D000461 ORTHO05D006079 6.8e-81 304.7 257 63.4
BcaB04g18377 Brassica carinata HOM05D000461 ORTHO05D006079 2.6e-80 302.8 258 63.6
A08p12280 Brassica napus HOM05D000461 ORTHO05D006079 2.6e-80 302.8 258 63.6
BraA08t33230Z Brassica rapa HOM05D000461 ORTHO05D006079 2.6e-80 302.8 258 63.6
BolC8t48358H Brassica oleracea HOM05D000461 ORTHO05D006079 7.5e-80 301.2 258 63.2
CARHR222680 Cardamine hirsuta HOM05D000461 ORTHO05D006079 1.3e-79 300.4 258 63.2
AL7G38730 Arabidopsis lyrata HOM05D000461 ORTHO05D006079 3.7e-79 298.9 258 63.2
BcaC07g37977 Brassica carinata HOM05D000461 ORTHO05D006079 1.1e-78 297.4 258 62.8
Carub.0007s2522 Capsella rubella HOM05D000461 ORTHO05D006079 1.4e-78 297.0 256 62.5
AT4G16310 Arabidopsis thaliana HOM05D000461 ORTHO05D006079 6.0e-77 291.6 258 61.6
Sc26g0003210 Simmondsia chinensis HOM05D000461 ORTHO05D006079 1.9e-75 286.6 211 71.1
SGA_v2.0_scaffold11G05881 Striga asiatica HOM05D000461 ORTHO05D006079 3.6e-74 282.3 257 62.3
HPP92_014427 Vanilla planifolia HOM05D000461 ORTHO05D006079 4.7e-74 282.0 253 61.7
DCAR_009940 Daucus carota HOM05D000461 ORTHO05D006079 1.8e-73 280.0 225 68.4
MBI05_g16278_MAGBIO Magnolia biondii HOM05D000461 ORTHO05D006079 2.4e-70 269.6 219 65.3
DCAR_022441 Daucus carota HOM05D000461 ORTHO05D006079 1.1e-67 260.8 212 64.2
DCAR_022442 Daucus carota HOM05D000461 ORTHO05D006079 2.5e-67 259.6 212 63.7
ATR0149G010 Amborella trichopoda HOM05D000461 ORTHO05D006079 2.1e-66 256.5 252 56.7
CDE04G0128 Ceratophyllum demersum HOM05D002948 ORTHO05D006079 3.1e-65 252.7 236 58.5
MSTRG.9637 Avicennia marina HOM05D000461 ORTHO05D006079 6.0e-61 238.4 179 72.1
MD15G1018400 Malus domestica HOM05D000461 ORTHO05D006079 9.5e-59 231.1 193 63.2
vmacro04331 Vaccinium macrocarpon HOM05D000461 ORTHO05D006079 1.2e-58 230.7 178 70.8
unitig_8.g4920 Utricularia gibba HOM05D000461 ORTHO05D006079 1.1e-57 227.6 234 56.8
GSVIVG01009833001 Vitis vinifera HOM05D000461 ORTHO05D006079 6.0e-53 211.8 224 57.1
Os10g0532150 Oryza sativa ssp. japonica HOM05D000461 ORTHO05D006079 8.7e-52 208.0 248 48.8
SEGI_05511 Sequoiadendron giganteum HOM05D000461 ORTHO05D006079 3.2e-46 189.5 264 44.7
CDE02G3594 Ceratophyllum demersum HOM05D000461 ORTHO05D006079 3.0e-44 183.0 234 50.0
Zm00001eb021760 Zea mays HOM05D000461 ORTHO05D006079 1.1e-43 181.0 249 44.6
FAN20G0728 Fragaria x ananassa HOM05D000461 ORTHO05D006079 1.3e-39 167.5 157 62.4
Pp3c1_1170 Physcomitrium patens HOM05D000461 ORTHO05D006079 5.3e-17 92.4 80 58.8
HanXRQChr08g0231601 Helianthus annuus HOM05D000461 ORTHO05D006079 6.9e-17 92.0 92 56.5
Pp3c1_6380 Physcomitrium patens HOM05D000461 ORTHO05D006079 2.0e-16 90.5 90 52.2
Pp3c1_6385 Physcomitrium patens HOM05D000461 ORTHO05D006079 2.0e-16 90.5 90 52.2
Pp3c2_35433 Physcomitrium patens HOM05D000461 ORTHO05D006079 3.4e-16 89.7 79 58.2
Pp3c2_35520 Physcomitrium patens HOM05D000461 ORTHO05D006079 2.9e-15 86.7 79 55.7
AagrBONN_evm.TU.Sc2ySwM_228.3665 Anthoceros agrestis HOM05D000461 ORTHO05D006079 2.5e-14 83.6 78 53.8
SMO356G0625 Selaginella moellendorffii HOM05D000461 ORTHO05D006079 2.7e-13 80.1 78 50.0
Actinidia26701 Actinidia chinensis HOM05D000461 ORTHO05D006079 4.2e-06 56.2 49 63.3


User provided reference genes

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