Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0028384 Camellia sinensis var. sinensis HOM05D006869 ORTHO05D008641 1.2e-58 229.9 143 100.0
CSS0030709 Camellia sinensis var. sinensis HOM05D006869 ORTHO05D008641 1.2e-58 229.9 143 100.0
Manes.15G174500 Manihot esculenta HOM05D006869 ORTHO05D008641 2.2e-44 182.6 143 71.3
Actinidia09229 Actinidia chinensis HOM05D002067 ORTHO05D002244 3.1e-43 178.7 136 75.0
Ciclev10033051m.g Citrus clementina HOM05D006869 ORTHO05D008641 7.0e-43 177.6 117 80.3
Atru.chr6.1763 Acer truncatum HOM05D006869 ORTHO05D008641 1.2e-42 176.8 117 82.1
Potri.001G145500 Populus trichocarpa HOM05D006869 ORTHO05D008641 2.0e-42 176.0 122 77.0
TWI15G0987 Tripterygium wilfordii HOM05D006869 ORTHO05D008641 2.9e-41 172.2 121 81.0
CiPaw.12G061200 Carya illinoinensis HOM05D006869 ORTHO05D008641 8.6e-41 170.6 110 84.5
Migut.D00490 Erythranthe guttata HOM05D006869 ORTHO05D008641 1.5e-40 169.9 115 77.4
GSVIVG01013242001 Vitis vinifera HOM05D006869 ORTHO05D008641 2.5e-40 169.1 113 80.5
COL.COLO4_17099 Corchorus olitorius HOM05D006869 ORTHO05D008641 4.2e-40 168.3 119 75.6
RcHm_v2.0_Chr7g0208861 Rosa chinensis HOM05D006869 ORTHO05D008641 7.2e-40 167.5 118 78.0
MD06G1029000 Malus domestica HOM05D006869 ORTHO05D008641 9.5e-40 167.2 110 82.7
Prupe.5G042800 Prunus persica HOM05D006869 ORTHO05D008641 1.6e-39 166.4 122 73.8
Sopen06g021250 Solanum pennellii HOM05D006869 ORTHO05D008641 3.6e-39 165.2 121 72.7
Duzib205G1446 Durio zibethinus HOM05D006869 ORTHO05D008641 4.7e-39 164.9 119 74.8
Hma1.2p1_0414F.1_g147870 Hydrangea macrophylla HOM05D006869 ORTHO05D008641 4.7e-39 164.9 117 79.5
CiPaw.11G089700 Carya illinoinensis HOM05D006869 ORTHO05D008641 8.0e-39 164.1 115 79.1
FvH4_5g21430 Fragaria vesca HOM05D006869 ORTHO05D008641 8.0e-39 164.1 118 78.0
PGSC0003DMG400026597 Solanum tuberosum HOM05D006869 ORTHO05D008641 8.0e-39 164.1 121 72.7
Lj3g0015338 Lotus japonicus HOM05D006869 ORTHO05D008641 5.2e-38 161.4 116 76.7
Thecc.03G232900 Theobroma cacao HOM05D006869 ORTHO05D008641 1.5e-37 159.8 120 73.3
Ca_03396_v3 Cicer arietinum L. HOM05D006869 ORTHO05D008641 2.0e-37 159.5 117 73.5
FAN04G2266 Fragaria x ananassa HOM05D006869 ORTHO05D008641 2.6e-37 159.1 124 75.0
FAN08G2623 Fragaria x ananassa HOM05D006869 ORTHO05D008641 2.6e-37 159.1 124 75.0
MSTRG.17527 Avicennia marina HOM05D006869 ORTHO05D008641 5.7e-37 157.9 117 72.6
FAN18G0870 Fragaria x ananassa HOM05D006869 ORTHO05D008641 7.5e-37 157.5 124 74.2
TAR375G0341 Trochodendron aralioides HOM05D006869 ORTHO05D008641 7.5e-37 157.5 114 78.9
FAN13G1368 Fragaria x ananassa HOM05D006869 ORTHO05D008641 9.8e-37 157.1 115 78.3
Cpa.g.sc6.427 Carica papaya HOM05D006869 ORTHO05D008641 1.3e-36 156.8 115 75.7
Phvul.005G061500 Phaseolus vulgaris HOM05D006869 ORTHO05D008641 2.2e-36 156.0 107 78.5
Gohir.A09G198300 Gossypium hirsutum HOM05D006869 ORTHO05D008641 2.8e-36 155.6 119 73.1
Medtr2g071640 Medicago truncatula HOM05D006869 ORTHO05D008641 2.8e-36 155.6 114 72.8
Sabra01G0114100 Salix brachista HOM05D006869 ORTHO05D008641 2.8e-36 155.6 153 60.8
TPR.G26622 Trifolium pratense HOM05D006869 ORTHO05D008641 3.7e-36 155.2 115 73.0
Eucgr.E00305 Eucalyptus grandis HOM05D006869 ORTHO05D008641 1.1e-35 153.7 109 77.1
PGR042G2539 Punica granatum HOM05D006869 ORTHO05D008641 2.4e-35 152.5 108 75.9
Gohir.D09G192900 Gossypium hirsutum HOM05D006869 ORTHO05D008641 4.1e-35 151.8 119 72.3
CANSAT21G0218 Cannabis sativa HOM05D006869 ORTHO05D008641 7.0e-35 151.0 115 71.3
CsaV3_1G016990 Cucumis sativus L. HOM05D006869 ORTHO05D008641 7.0e-35 151.0 119 68.1
CsaV3_3G049460 Cucumis sativus L. HOM05D006869 ORTHO05D008641 7.0e-35 151.0 119 68.1
Aqoxy3G02480 Aquilegia oxysepala HOM05D006869 ORTHO05D008641 9.2e-35 150.6 113 71.7
Nn1g00590 Nelumbo nucifera HOM05D006869 ORTHO05D008641 9.2e-35 150.6 110 74.5
Sc22g0001440 Simmondsia chinensis HOM05D006869 ORTHO05D008641 1.6e-34 149.8 123 70.7
Glyma.13G259900 Glycine max HOM05D006869 ORTHO05D008641 2.0e-34 149.4 112 73.2
MELO3C003378.2 Cucumis melo HOM05D006869 ORTHO05D008641 2.7e-34 149.1 119 67.2
VMungo1080G1596 Vigna mungo HOM05D006869 ORTHO05D008641 5.9e-34 147.9 107 73.8
PSO675G8621 Papaver somniferum HOM05D006869 ORTHO05D008641 7.8e-34 147.5 99 80.8
ECA233G4479 Erigeron canadensis HOM05D006869 ORTHO05D008641 1.0e-33 147.1 110 73.6
PSO832G0919 Papaver somniferum HOM05D006869 ORTHO05D008641 1.3e-33 146.7 109 74.3
PSO732G0001 Papaver somniferum HOM05D006869 ORTHO05D008641 5.0e-33 144.8 119 68.1
arahy.Tifrunner.gnm1.ann1.TLF144 Arachis hypogaea HOM05D006869 ORTHO05D008641 3.3e-32 142.1 110 69.1
arahy.Tifrunner.gnm1.ann1.U4TMK5 Arachis hypogaea HOM05D006869 ORTHO05D008641 4.3e-32 141.7 113 67.3
DCAR_005606 Daucus carota HOM05D006869 ORTHO05D008641 4.3e-32 141.7 140 62.1
Actinidia14827 Actinidia chinensis HOM05D006869 ORTHO05D008641 5.6e-32 141.4 114 80.7
DCAR_024975 Daucus carota HOM05D006869 ORTHO05D008641 9.5e-32 140.6 119 65.5
Lalb_Chr25g0285441 Lupinus albus HOM05D006869 ORTHO05D008641 9.5e-32 140.6 109 70.6
Hund14421 Selenicereus undatus HOM05D006869 ORTHO05D008641 1.2e-31 140.2 109 73.4
arahy.Tifrunner.gnm1.ann1.4F5UFQ Arachis hypogaea HOM05D006869 ORTHO05D008641 1.6e-31 139.8 110 68.2
Nitab4.5_0003100g0080 Nicotiana tabacum HOM05D006869 ORTHO05D008641 2.1e-31 139.4 135 60.7
Dinv25192 Davidia involucrata HOM05D006869 ORTHO05D008641 8.0e-31 137.5 123 66.7
ClCG09G012310 Citrullus lanatus HOM05D006869 ORTHO05D008641 1.4e-30 136.7 129 59.7
Gorai.006G215800 Gossypium raimondii HOM05D006869 ORTHO05D008641 1.4e-30 136.7 156 56.4
Glyma.15G248100 Glycine max HOM05D006869 ORTHO05D008641 4.0e-30 135.2 99 75.8
HanXRQChr08g0227941 Helianthus annuus HOM05D006869 ORTHO05D008641 6.8e-30 134.4 111 69.4
unitig_746.g26748 Utricularia gibba HOM05D006869 ORTHO05D008641 2.0e-29 132.9 108 68.5
THA.LOC104798477 Tarenaya hassleriana HOM05D006869 ORTHO05D008641 5.8e-29 131.3 111 64.9
HPP92_026375 Vanilla planifolia HOM05D006869 ORTHO05D008641 7.5e-29 131.0 109 66.1
AT1G32370 Arabidopsis thaliana HOM05D006869 ORTHO05D008641 5.4e-27 124.8 103 68.0
Carub.0001s3075 Capsella rubella HOM05D006869 ORTHO05D008641 7.0e-27 124.4 103 67.0
Sp1g28510 Schrenkiella parvula HOM05D006869 ORTHO05D008641 7.0e-27 124.4 103 67.0
BcaC05g27275 Brassica carinata HOM05D006869 ORTHO05D008641 1.2e-26 123.6 103 68.0
A09p33790 Brassica napus HOM05D006869 ORTHO05D008641 1.2e-26 123.6 103 68.0
C05p31830 Brassica napus HOM05D006869 ORTHO05D008641 1.2e-26 123.6 103 68.0
BolC5t31911H Brassica oleracea HOM05D006869 ORTHO05D008641 1.2e-26 123.6 103 68.0
BraA09t38929Z Brassica rapa HOM05D006869 ORTHO05D008641 1.2e-26 123.6 103 68.0
THA.LOC104798593 Tarenaya hassleriana HOM05D006869 ORTHO05D008641 1.2e-26 123.6 102 64.7
BcaB07g32921 Brassica carinata HOM05D006869 ORTHO05D008641 1.6e-26 123.2 103 67.0
CARHR031750 Cardamine hirsuta HOM05D006869 ORTHO05D008641 1.6e-26 123.2 103 68.0
Thhalv10009100m.g Eutrema salsugineum HOM05D006869 ORTHO05D008641 1.6e-26 123.2 103 67.0
AL1G46570 Arabidopsis lyrata HOM05D006869 ORTHO05D008641 3.5e-26 122.1 106 66.0
Rhsim07G0123600 Rhododendron simsii HOM05D006869 ORTHO05D008641 1.7e-25 119.8 80 80.0
Aa31LG2G13630 Aethionema arabicum HOM05D006869 ORTHO05D008641 2.3e-25 119.4 103 65.0
Oeu015441.1 Olea europaea HOM05D006869 ORTHO05D008641 3.0e-25 119.0 95 70.5
Cc08_g02310 Coffea canephora HOM05D006869 ORTHO05D008641 6.6e-25 117.9 88 70.5
vmacro14155 Vaccinium macrocarpon HOM05D006869 ORTHO05D008641 6.6e-25 117.9 75 81.3
Zm00001eb024260 Zea mays HOM05D006869 ORTHO05D008641 4.3e-24 115.2 109 59.6
Os02g0279600 Oryza sativa ssp. japonica HOM05D006869 ORTHO05D008641 1.2e-23 113.6 112 58.0
SGA_v2.0_scaffold94G28479 Striga asiatica HOM05D006869 ORTHO05D008641 1.2e-23 113.6 87 71.3
Peaxi162Scf00497g00098 Petunia axillaris HOM05D006869 ORTHO05D008641 3.6e-23 112.1 75 77.3
THA.LOC104822843 Tarenaya hassleriana HOM05D006869 ORTHO05D008641 3.1e-22 109.0 84 69.0
Nitab4.5_0004658g0060 Nicotiana tabacum HOM05D006869 ORTHO05D008641 4.0e-22 108.6 79 69.6
MBI04_g13865_MAGBIO Magnolia biondii HOM05D006869 ORTHO05D008641 5.2e-22 108.2 85 69.4
ATR0049G078 Amborella trichopoda HOM05D006869 ORTHO05D008641 3.4e-21 105.5 77 72.7
SEGI_28722 Sequoiadendron giganteum HOM05D006869 ORTHO05D008641 9.8e-21 104.0 95 63.2
Sed0006536 Sechium edule HOM05D006869 ORTHO05D008641 2.2e-20 102.8 81 66.7
EL10Ac5g12174 Beta vulgaris HOM05D006869 ORTHO05D008641 1.1e-19 100.5 73 71.2
SalBow6G5905 Salvia bowleyana HOM05D006869 ORTHO05D008641 1.1e-19 100.5 84 60.7
Lsat_1_v5_gn_6_67180 Lactuca sativa HOM05D006869 ORTHO05D008641 2.4e-19 99.4 79 68.4
Ah.07g200090 Amaranthus hybridus HOM05D006869 ORTHO05D008641 1.3e-17 93.6 70 67.1
Psat1g009440 Pisum sativum HOM05D006869 ORTHO05D008641 9.5e-16 87.4 57 82.5
Haze_08288 Corylus avellana HOM05D006869 ORTHO05D008641 6.8e-14 81.3 75 64.0
AagrBONN_evm.TU.Sc2ySwM_228.2858 Anthoceros agrestis HOM05D006869 ORTHO05D008641 7.5e-13 77.8 98 46.9
BcaC05g27873 Brassica carinata HOM05D006869 ORTHO05D008641 2.2e-12 76.3 102 53.9
C05p38760 Brassica napus HOM05D006869 ORTHO05D008641 2.2e-12 76.3 102 53.9
BolC5t32616H Brassica oleracea HOM05D006869 ORTHO05D008641 2.9e-12 75.9 68 66.2
Dinv28924 Davidia involucrata HOM05D002067 ORTHO05D002244 4.9e-12 75.1 43 88.4
PGR142G3578 Punica granatum HOM05D006869 ORTHO05D008641 5.4e-11 71.6 57 61.4
vmacro23515 Vaccinium macrocarpon HOM05D006869 ORTHO05D008641 4.6e-10 68.6 44 77.3
Mapoly0009s0146 Marchantia polymorpha HOM05D006869 ORTHO05D008641 7.8e-10 67.8 94 42.6
Zm00001eb390630 Zea mays HOM05D006869 ORTHO05D008641 4.3e-08 62.0 49 69.4
Sed0003750 Sechium edule HOM05D006869 ORTHO05D008641 6.8e-06 54.7 43 67.4


User provided reference genes

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