Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0028351 Camellia sinensis var. sinensis HOM05D006904 ORTHO05D008439 2.6e-165 585.5 328 100.0
vmacro11509 Vaccinium macrocarpon HOM05D006904 ORTHO05D008439 1.9e-104 383.3 324 67.0
Actinidia04169 Actinidia chinensis HOM05D006904 ORTHO05D008439 5.8e-101 371.7 327 65.7
Rhsim02G0251400 Rhododendron simsii HOM05D006904 ORTHO05D008439 7.1e-99 364.8 323 65.6
Dinv02287 Davidia involucrata HOM05D006904 ORTHO05D008439 1.3e-95 354.0 333 66.7
Hma1.2p1_0456F.1_g156570 Hydrangea macrophylla HOM05D006904 ORTHO05D008439 1.2e-90 337.4 251 78.1
TAR629G0561 Trochodendron aralioides HOM05D006904 ORTHO05D008439 4.6e-90 335.5 326 64.4
Potri.001G084500 Populus trichocarpa HOM05D006904 ORTHO05D008439 6.0e-90 335.1 323 60.4
QL02p029228 Quercus lobata HOM05D006904 ORTHO05D008439 9.6e-88 327.8 325 62.2
Haze_09157 Corylus avellana HOM05D006904 ORTHO05D008439 2.1e-87 326.6 325 58.8
Cfa011933 Carpinus fangiana HOM05D006904 ORTHO05D008439 3.6e-87 325.9 323 59.8
HanXRQChr07g0192161 Helianthus annuus HOM05D006904 ORTHO05D008439 6.2e-87 325.1 324 58.3
Nitab4.5_0004251g0070 Nicotiana tabacum HOM05D006904 ORTHO05D008439 4.0e-86 322.4 280 62.5
Solyc08g083010.3 Solanum lycopersicum HOM05D006904 ORTHO05D008439 9.0e-86 321.2 272 62.1
GSVIVG01019640001 Vitis vinifera HOM05D006904 ORTHO05D008439 9.0e-86 321.2 326 60.4
Sopen08g031220 Solanum pennellii HOM05D006904 ORTHO05D008439 1.2e-85 320.9 308 57.5
Haze_09163 Corylus avellana HOM05D006904 ORTHO05D008439 1.5e-85 320.5 327 58.4
CAN.G567.78 Capsicum annuum HOM05D006904 ORTHO05D008439 7.6e-85 318.2 322 56.5
MSTRG.24864 Avicennia marina HOM05D006904 ORTHO05D008439 3.8e-84 315.8 321 57.6
Gohir.D12G240700 Gossypium hirsutum HOM05D006904 ORTHO05D008439 3.8e-84 315.8 318 57.9
Gorai.008G257800 Gossypium raimondii HOM05D006904 ORTHO05D008439 3.8e-84 315.8 318 57.9
PGSC0003DMG400012243 Solanum tuberosum HOM05D006904 ORTHO05D008439 4.9e-84 315.5 252 65.9
Gohir.A12G239500 Gossypium hirsutum HOM05D006904 ORTHO05D008439 2.4e-83 313.2 318 57.5
COL.COLO4_10787 Corchorus olitorius HOM05D006904 ORTHO05D008439 7.1e-83 311.6 318 57.9
Ciclev10021179m.g Citrus clementina HOM05D006904 ORTHO05D008439 2.7e-82 309.7 318 56.6
Thecc.03G222200 Theobroma cacao HOM05D006904 ORTHO05D008439 3.5e-82 309.3 314 58.0
MBI04_g44912_MAGBIO Magnolia biondii HOM05D006904 ORTHO05D008439 8.7e-81 304.7 308 57.5
Oeu010740.1 Olea europaea HOM05D006904 ORTHO05D008439 1.9e-80 303.5 243 66.3
Prupe.5G128700 Prunus persica HOM05D006904 ORTHO05D008439 3.3e-80 302.8 323 59.1
MD06G1117600 Malus domestica HOM05D006904 ORTHO05D008439 7.4e-80 301.6 287 59.2
Nitab4.5_0007063g0060 Nicotiana tabacum HOM05D006904 ORTHO05D008439 2.1e-79 300.1 284 59.5
ECA233G3570 Erigeron canadensis HOM05D006904 ORTHO05D008439 3.1e-78 296.2 247 63.2
ClCG10G000840 Citrullus lanatus HOM05D006904 ORTHO05D008439 4.0e-78 295.8 323 57.9
MD14G1125000 Malus domestica HOM05D006904 ORTHO05D008439 6.9e-78 295.0 325 53.8
Sabra01G0061300 Salix brachista HOM05D006904 ORTHO05D008439 1.5e-77 293.9 366 50.8
TWI81G0826 Tripterygium wilfordii HOM05D006904 ORTHO05D008439 3.4e-77 292.7 322 54.0
Lj8A201G80 Lonicera japonica HOM05D006904 ORTHO05D008439 2.9e-76 289.7 244 63.1
Lsat_1_v5_gn_6_9180 Lactuca sativa HOM05D000482 ORTHO05D000349 4.9e-76 288.9 308 56.8
Migut.A01096 Erythranthe guttata HOM05D006904 ORTHO05D008439 5.5e-75 285.4 299 54.8
PSO675G2501 Papaver somniferum HOM05D006904 ORTHO05D008439 5.5e-75 285.4 327 51.1
Atru.chr9.1900 Acer truncatum HOM05D006904 ORTHO05D008439 7.1e-75 285.0 243 63.8
MBI04_g21743_MAGBIO Magnolia biondii HOM05D006904 ORTHO05D008439 9.3e-75 284.6 243 63.8
RcHm_v2.0_Chr7g0186801 Rosa chinensis HOM05D006904 ORTHO05D008439 9.3e-75 284.6 292 56.2
CiPaw.12G078200 Carya illinoinensis HOM05D006904 ORTHO05D008439 1.2e-74 284.3 319 58.0
Aqoxy5G04256 Aquilegia oxysepala HOM05D006904 ORTHO05D008439 3.5e-74 282.7 275 56.7
Sc01g0010610 Simmondsia chinensis HOM05D006904 ORTHO05D008439 3.5e-74 282.7 326 54.0
Cc08_g16680 Coffea canephora HOM05D006904 ORTHO05D008439 6.0e-74 282.0 332 54.8
Eucgr.E01035 Eucalyptus grandis HOM05D006904 ORTHO05D008439 7.9e-74 281.6 253 67.6
PSO541G0496 Papaver somniferum HOM05D006904 ORTHO05D008439 3.0e-73 279.6 326 50.9
EL10Ac5g12440 Beta vulgaris HOM05D006904 ORTHO05D008439 1.1e-72 277.7 313 51.1
Glyma.09G286200 Glycine max HOM05D006904 ORTHO05D008439 1.5e-72 277.3 286 57.7
FvH4_5g11010 Fragaria vesca HOM05D006904 ORTHO05D008439 5.7e-72 275.4 285 58.6
FAN18G2239 Fragaria x ananassa HOM05D006904 ORTHO05D008439 5.7e-72 275.4 285 58.6
FAN04G1837 Fragaria x ananassa HOM05D006904 ORTHO05D008439 9.6e-72 274.6 285 57.5
Lj2g0027548 Lotus japonicus HOM05D006904 ORTHO05D008439 1.3e-71 274.2 297 52.5
SGA_v2.0_scaffold104G30265 Striga asiatica HOM05D006904 ORTHO05D008439 1.6e-71 273.9 270 58.9
FAN13G1638 Fragaria x ananassa HOM05D006904 ORTHO05D008439 2.4e-70 270.0 285 57.2
Hund11354 Selenicereus undatus HOM05D006904 ORTHO05D008439 2.4e-70 270.0 289 54.3
Duzib205G0314 Durio zibethinus HOM05D006904 ORTHO05D008439 4.1e-70 269.2 326 52.1
Peaxi162Scf00074g00356 Petunia axillaris HOM05D006904 ORTHO05D008439 1.0e-68 264.6 261 57.1
Phvul.002G333700 Phaseolus vulgaris HOM05D006904 ORTHO05D008439 1.3e-68 264.2 268 56.0
Ah.12g053150 Amaranthus hybridus HOM05D006904 ORTHO05D008439 1.7e-68 263.8 274 54.4
Ca_13963_v3 Cicer arietinum L. HOM05D006904 ORTHO05D008439 1.7e-68 263.8 277 53.4
Medtr3g005290 Medicago truncatula HOM05D006904 ORTHO05D008439 1.7e-68 263.8 295 51.2
AUR62007044 Chenopodium quinoa HOM05D006904 ORTHO05D008439 2.2e-68 263.5 324 48.8
arahy.Tifrunner.gnm1.ann1.U3Q9D7 Arachis hypogaea HOM05D006904 ORTHO05D008439 6.5e-68 261.9 295 52.2
THA.LOC104813055 Tarenaya hassleriana HOM05D006904 ORTHO05D008439 8.5e-68 261.5 282 51.8
CsaV3_3G000910 Cucumis sativus L. HOM05D006904 ORTHO05D008439 4.2e-67 259.2 323 55.1
MELO3C013778.2 Cucumis melo HOM05D006904 ORTHO05D008439 9.3e-67 258.1 323 54.8
arahy.Tifrunner.gnm1.ann1.NJ37M5 Arachis hypogaea HOM05D006904 ORTHO05D008439 3.6e-66 256.1 311 50.8
Carub.0007s1701 Capsella rubella HOM05D006904 ORTHO05D008439 6.1e-66 255.4 289 51.9
AT4G24090 Arabidopsis thaliana HOM05D006904 ORTHO05D008439 7.9e-66 255.0 249 56.6
Psat1g000400 Pisum sativum HOM05D006904 ORTHO05D008439 1.0e-65 254.6 282 53.2
Thhalv10025762m.g Eutrema salsugineum HOM05D006904 ORTHO05D008439 1.3e-65 254.2 301 50.5
VMungo1309G0432 Vigna mungo HOM05D006904 ORTHO05D008439 3.9e-65 252.7 268 54.5
AL7G29200 Arabidopsis lyrata HOM05D006904 ORTHO05D008439 8.7e-65 251.5 265 54.0
BcaNung01113 Brassica carinata HOM05D006904 ORTHO05D008439 1.5e-64 250.8 260 53.5
A01p15360 Brassica napus HOM05D000458 ORTHO05D000951 2.5e-64 250.0 278 51.4
TPR.G25509 Trifolium pratense HOM05D006904 ORTHO05D008439 4.3e-64 249.2 249 55.4
BcaC09g50912 Brassica carinata HOM05D006904 ORTHO05D008439 9.7e-64 248.1 278 51.1
C01p19310 Brassica napus HOM05D000458 ORTHO05D000951 9.7e-64 248.1 278 51.1
BolC1t01857H Brassica oleracea HOM05D000458 ORTHO05D000951 9.7e-64 248.1 278 51.1
BraA01t01480Z Brassica rapa HOM05D006904 ORTHO05D008439 4.8e-63 245.7 313 47.9
PGR042G3610 Punica granatum HOM05D006904 ORTHO05D008439 1.1e-62 244.6 276 56.9
CDE09G0165 Ceratophyllum demersum HOM05D006904 ORTHO05D008439 4.1e-62 242.7 300 50.0
CDE11G0025 Ceratophyllum demersum HOM05D006904 ORTHO05D008439 6.9e-62 241.9 298 48.7
DCAR_006536 Daucus carota HOM05D006904 ORTHO05D008439 2.0e-61 240.4 243 59.3
Sp7g22050 Schrenkiella parvula HOM05D006904 ORTHO05D008439 1.9e-59 233.8 249 52.2
Aa31LG6G7300 Aethionema arabicum HOM05D006904 ORTHO05D008439 1.6e-58 230.7 248 52.4
SalBow8G2695 Salvia bowleyana HOM05D006904 ORTHO05D008439 1.6e-58 230.7 272 54.0
Haze_16434 Corylus avellana HOM05D006904 ORTHO05D008439 1.0e-57 228.0 262 55.3
Sed0025618 Sechium edule HOM05D006904 ORTHO05D008439 5.1e-57 225.7 252 55.2
ATR0620G017 Amborella trichopoda HOM05D006904 ORTHO05D008439 8.8e-57 224.9 275 47.6
Manes.02G003600 Manihot esculenta HOM05D006904 ORTHO05D008439 2.0e-56 223.8 265 59.2
CANSAT21G0222 Cannabis sativa HOM05D006904 ORTHO05D008439 2.6e-56 223.4 250 56.0
AUR62019908 Chenopodium quinoa HOM05D006904 ORTHO05D008439 7.4e-56 221.9 319 48.0
Haze_14079 Corylus avellana HOM05D006904 ORTHO05D008439 1.8e-54 217.2 296 50.0
unitig_88.g27646 Utricularia gibba HOM05D006904 ORTHO05D008439 1.3e-52 211.1 295 46.4
HPP92_025869 Vanilla planifolia HOM05D006904 ORTHO05D008439 3.9e-49 199.5 249 50.2
Os09g0529350 Oryza sativa ssp. japonica HOM05D006904 ORTHO05D008439 7.2e-43 178.7 169 56.2
CARHR231490 Cardamine hirsuta HOM05D006904 ORTHO05D008439 8.0e-42 175.3 166 55.4
Zm00001eb319140 Zea mays HOM05D006904 ORTHO05D008439 4.0e-41 172.9 245 49.4
ECA246G4131 Erigeron canadensis HOM05D006904 ORTHO05D008439 2.8e-39 166.8 322 41.0
Lsat_1_v5_gn_3_13720 Lactuca sativa HOM05D006904 ORTHO05D008439 8.2e-39 165.2 290 41.0
Cpa.g.sc175.18 Carica papaya HOM05D006904 ORTHO05D008439 4.7e-34 149.4 212 47.6
SEGI_29366 Sequoiadendron giganteum HOM05D006904 ORTHO05D008439 2.3e-33 147.1 239 38.9
Nn5g30646 Nelumbo nucifera HOM05D006904 ORTHO05D008439 1.8e-30 137.5 113 65.5
HanXRQChr06g0166841 Helianthus annuus HOM05D006904 ORTHO05D008439 9.1e-30 135.2 151 49.0
Aqoxy5G04252 Aquilegia oxysepala HOM05D006904 ORTHO05D008439 3.5e-29 133.3 161 49.1
Pp3c9_20020 Physcomitrium patens HOM05D006904 ORTHO05D008439 1.1e-27 128.3 263 36.9
AagrBONN_evm.TU.Sc2ySwM_228.3172 Anthoceros agrestis HOM05D006904 ORTHO05D008439 1.4e-22 111.3 307 32.6
Mapoly0033s0090 Marchantia polymorpha HOM05D006904 ORTHO05D008439 7.8e-21 105.5 155 39.4
CBR_g70738 Chara braunii HOM05D006904 ORTHO05D008439 1.7e-20 104.4 155 36.8
SMO361G0353 Selaginella moellendorffii HOM05D006904 ORTHO05D008439 6.6e-20 102.4 144 39.6
MCO05G331 Micromonas commoda HOM05D006904 ORTHO05D008439 1.0e-17 95.1 147 39.5
QL02p029244 Quercus lobata HOM05D006904 ORTHO05D008439 1.4e-17 94.7 121 49.6
BcaC09g50913 Brassica carinata HOM05D006904 ORTHO05D008439 2.9e-15 87.0 98 55.1
Cre02.g144850 Chlamydomonas reinhardtii HOM05D006904 ORTHO05D008439 9.5e-11 72.0 257 29.6
AUR62041665 Chenopodium quinoa HOM05D006904 ORTHO05D008439 1.5e-08 64.7 58 53.4
Aa31LG6G7320 Aethionema arabicum HOM05D003846 ORTHO05D004726 8.3e-07 58.9 142 35.2


User provided reference genes

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