Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0028346 Camellia sinensis var. sinensis HOM05D004680 ORTHO05D005939 3.8e-262 907.5 430 100.0
vmacro18875 Vaccinium macrocarpon HOM05D004680 ORTHO05D005939 2.7e-223 778.5 438 85.6
Dinv30468 Davidia involucrata HOM05D004680 ORTHO05D005939 1.3e-222 776.2 430 84.7
Rhsim08G0225100 Rhododendron simsii HOM05D004680 ORTHO05D005939 2.1e-220 768.8 441 84.8
CSS0039709 Camellia sinensis var. sinensis HOM05D004680 ORTHO05D005939 9.9e-218 760.0 432 83.8
Hma1.2p1_1262F.1_g271230 Hydrangea macrophylla HOM05D004680 ORTHO05D005939 7.9e-215 750.4 431 83.1
TAR383G0102 Trochodendron aralioides HOM05D004680 ORTHO05D005939 1.0e-214 750.0 425 83.1
Peaxi162Scf00015g00135 Petunia axillaris HOM05D004680 ORTHO05D005939 2.5e-213 745.3 428 80.6
Nn3g18134 Nelumbo nucifera HOM05D004680 ORTHO05D005939 2.8e-212 741.9 425 81.9
Nitab4.5_0000351g0010 Nicotiana tabacum HOM05D004680 ORTHO05D005939 6.9e-211 737.3 430 79.3
Nitab4.5_0009963g0010 Nicotiana tabacum HOM05D004680 ORTHO05D005939 2.0e-210 735.7 427 80.6
Migut.I00930 Erythranthe guttata HOM05D004680 ORTHO05D005939 1.9e-208 729.2 434 79.0
Nitab4.5_0006985g0040 Nicotiana tabacum HOM05D004680 ORTHO05D005939 1.0e-206 723.4 436 77.3
Solyc03g120490.3 Solanum lycopersicum HOM05D004680 ORTHO05D005939 3.0e-206 721.8 428 77.8
Cc04_g02880 Coffea canephora HOM05D004680 ORTHO05D005939 5.1e-206 721.1 438 78.8
Sopen03g039370 Solanum pennellii HOM05D004680 ORTHO05D005939 6.7e-206 720.7 428 77.6
SalBow2G2497 Salvia bowleyana HOM05D004680 ORTHO05D005939 1.1e-205 719.9 430 78.1
MSTRG.22656 Avicennia marina HOM05D004680 ORTHO05D005939 1.5e-205 719.5 434 77.6
PGSC0003DMG400002632 Solanum tuberosum HOM05D004680 ORTHO05D005939 3.3e-205 718.4 428 77.6
SGA_v2.0_scaffold69G23355 Striga asiatica HOM05D004680 ORTHO05D005939 1.8e-203 712.6 437 77.1
Sc12g0009530 Simmondsia chinensis HOM05D004680 ORTHO05D005939 2.4e-203 712.2 428 76.4
Cfa002107 Carpinus fangiana HOM05D004680 ORTHO05D005939 4.0e-203 711.4 436 78.7
Aqoxy7G01528 Aquilegia oxysepala HOM05D004680 ORTHO05D005939 9.0e-203 710.3 434 77.6
Migut.D01009 Erythranthe guttata HOM05D004680 ORTHO05D005939 9.0e-203 710.3 429 77.2
HanXRQChr02g0032341 Helianthus annuus HOM05D004680 ORTHO05D005939 2.6e-202 708.8 435 76.1
Eucgr.F03051 Eucalyptus grandis HOM05D004680 ORTHO05D005939 4.5e-202 708.0 447 75.6
Ca_01140_v3 Cicer arietinum L. HOM05D004680 ORTHO05D005939 1.0e-201 706.8 441 77.8
FAN09G3354 Fragaria x ananassa HOM05D004680 ORTHO05D005939 1.7e-201 706.1 431 77.3
Glyma.15G017600 Glycine max HOM05D004680 ORTHO05D005939 2.2e-201 705.7 436 76.4
GSVIVG01017045001 Vitis vinifera HOM05D004680 ORTHO05D005939 6.5e-201 704.1 430 77.4
Sabra01G0153900 Salix brachista HOM05D004680 ORTHO05D005939 8.4e-201 703.7 438 76.7
RcHm_v2.0_Chr2g0139361 Rosa chinensis HOM05D004680 ORTHO05D005939 1.4e-200 703.0 432 77.5
FvH4_6g31940 Fragaria vesca HOM05D004680 ORTHO05D005939 1.9e-200 702.6 431 77.3
QL05p021321 Quercus lobata HOM05D004680 ORTHO05D005939 4.2e-200 701.4 395 83.5
Medtr2g101480 Medicago truncatula HOM05D004680 ORTHO05D005939 7.1e-200 700.7 437 76.9
Nn2g11656 Nelumbo nucifera HOM05D004680 ORTHO05D005939 1.2e-199 699.9 392 82.4
Actinidia32715 Actinidia chinensis HOM05D004680 ORTHO05D005939 1.6e-199 699.5 421 79.6
Glyma.13G356500 Glycine max HOM05D004680 ORTHO05D005939 1.6e-199 699.5 439 75.6
Phvul.005G169700 Phaseolus vulgaris HOM05D004680 ORTHO05D005939 2.1e-199 699.1 437 76.2
Oeu050619.1 Olea europaea HOM05D004680 ORTHO05D005939 2.7e-199 698.7 511 67.3
PGR102G2014 Punica granatum HOM05D004680 ORTHO05D005939 3.5e-199 698.4 433 74.8
TPR.G37217 Trifolium pratense HOM05D004680 ORTHO05D005939 3.5e-199 698.4 432 77.5
MSTRG.9470 Avicennia marina HOM05D004680 ORTHO05D005939 6.0e-199 697.6 408 79.9
MD09G1207900 Malus domestica HOM05D004680 ORTHO05D005939 6.0e-199 697.6 435 75.9
Prupe.3G064100 Prunus persica HOM05D004680 ORTHO05D005939 6.0e-199 697.6 438 75.8
Carub.0003s1595 Capsella rubella HOM05D004680 ORTHO05D005939 3.0e-198 695.3 432 75.9
Manes.11G036700 Manihot esculenta HOM05D004680 ORTHO05D005939 3.9e-198 694.9 443 75.4
AL3G28890 Arabidopsis lyrata HOM05D004680 ORTHO05D005939 6.7e-198 694.1 432 75.7
TWI75G1773 Tripterygium wilfordii HOM05D004680 ORTHO05D005939 1.1e-197 693.3 442 76.2
SGA_v2.0_scaffold4G02014 Striga asiatica HOM05D004680 ORTHO05D005939 1.9e-197 692.6 401 79.8
Hund06644 Selenicereus undatus HOM05D004680 ORTHO05D005939 2.5e-197 692.2 430 74.7
Potri.003G051200 Populus trichocarpa HOM05D004680 ORTHO05D005939 4.3e-197 691.4 438 75.6
EL10Ac9g22049 Beta vulgaris HOM05D004680 ORTHO05D005939 7.4e-197 690.6 433 74.6
AT3G16200 Arabidopsis thaliana HOM05D004680 ORTHO05D005939 9.7e-197 690.3 432 75.0
Lsat_1_v5_gn_1_34800 Lactuca sativa HOM05D004680 ORTHO05D005939 1.3e-196 689.9 423 76.6
ClCG07G013200 Citrullus lanatus HOM05D004680 ORTHO05D005939 2.8e-196 688.7 434 76.0
SalBow7G2677 Salvia bowleyana HOM05D004680 ORTHO05D005939 3.7e-196 688.3 426 75.4
Sed0009248 Sechium edule HOM05D004680 ORTHO05D005939 3.7e-196 688.3 430 76.3
CiPaw.02G147900 Carya illinoinensis HOM05D004680 ORTHO05D005939 4.8e-196 688.0 436 75.2
Potri.001G186200 Populus trichocarpa HOM05D004680 ORTHO05D005939 4.8e-196 688.0 438 75.1
Ah.01g021760 Amaranthus hybridus HOM05D004680 ORTHO05D005939 8.2e-196 687.2 426 74.6
Cpa.g.sc109.43 Carica papaya HOM05D004680 ORTHO05D005939 1.1e-195 686.8 431 75.6
Lj3g0026249 Lotus japonicus HOM05D004680 ORTHO05D005939 1.1e-195 686.8 436 76.1
Thhalv10020703m.g Eutrema salsugineum HOM05D004680 ORTHO05D005939 1.4e-195 686.4 432 75.2
AUR62031868 Chenopodium quinoa HOM05D004680 ORTHO05D005939 1.8e-195 686.0 430 73.5
CANSAT56G3143 Cannabis sativa HOM05D004680 ORTHO05D005939 2.4e-195 685.6 435 75.9
Sabra03G0027900 Salix brachista HOM05D004680 ORTHO05D005939 5.3e-195 684.5 438 74.7
CARHR091390 Cardamine hirsuta HOM05D004680 ORTHO05D005939 6.9e-195 684.1 432 74.5
THA.LOC104817975 Tarenaya hassleriana HOM05D004680 ORTHO05D005939 6.9e-195 684.1 441 74.4
MD17G1189000 Malus domestica HOM05D004680 ORTHO05D005939 2.0e-194 682.6 435 74.5
CsaV3_3G023810 Cucumis sativus L. HOM05D004680 ORTHO05D005939 2.6e-194 682.2 432 75.9
Sp3g14570 Schrenkiella parvula HOM05D004680 ORTHO05D005939 4.5e-194 681.4 432 74.3
Thecc.06G095100 Theobroma cacao HOM05D004680 ORTHO05D005939 4.5e-194 681.4 408 78.9
AUR62016515 Chenopodium quinoa HOM05D004680 ORTHO05D005939 5.9e-194 681.0 430 72.8
Nitab4.5_0011578g0010 Nicotiana tabacum HOM05D004680 ORTHO05D005939 7.7e-194 680.6 433 75.1
Gorai.009G136000 Gossypium raimondii HOM05D004680 ORTHO05D005939 3.8e-193 678.3 408 78.2
Lalb_Chr24g0395991 Lupinus albus HOM05D004680 ORTHO05D005939 3.8e-193 678.3 444 72.7
MELO3C012983.2 Cucumis melo HOM05D004680 ORTHO05D005939 5.0e-193 677.9 434 75.3
THA.LOC104815523 Tarenaya hassleriana HOM05D004680 ORTHO05D005939 5.0e-193 677.9 413 78.0
Peaxi162Scf00207g01238 Petunia axillaris HOM05D004680 ORTHO05D005939 8.5e-193 677.2 430 76.7
Gohir.D10G069100 Gossypium hirsutum HOM05D004680 ORTHO05D005939 1.1e-192 676.8 408 77.2
PSO566G0328 Papaver somniferum HOM05D004680 ORTHO05D005939 1.1e-192 676.8 404 78.0
Duzib192G0285 Durio zibethinus HOM05D004680 ORTHO05D005939 1.4e-192 676.4 408 78.9
FAN14G5860 Fragaria x ananassa HOM05D004680 ORTHO05D005939 1.4e-192 676.4 447 73.2
Gohir.A05G127800 Gossypium hirsutum HOM05D004680 ORTHO05D005939 2.5e-192 675.6 408 77.9
Lalb_Chr14g0373141 Lupinus albus HOM05D004680 ORTHO05D005939 2.5e-192 675.6 394 81.0
Ciclev10025565m.g Citrus clementina HOM05D004680 ORTHO05D005939 4.2e-192 674.9 442 73.5
Lalb_Chr22g0351431 Lupinus albus HOM05D004680 ORTHO05D005939 5.5e-192 674.5 442 73.3
VMungo1080G0622 Vigna mungo HOM05D004680 ORTHO05D005939 5.5e-192 674.5 474 70.0
Gorai.011G073000 Gossypium raimondii HOM05D004680 ORTHO05D005939 9.4e-192 673.7 408 77.0
BcaC09g48589 Brassica carinata HOM05D004680 ORTHO05D005939 1.2e-191 673.3 432 73.8
BraA05t22155Z Brassica rapa HOM05D004680 ORTHO05D005939 1.2e-191 673.3 433 73.9
A05p33300 Brassica napus HOM05D004680 ORTHO05D005939 1.6e-191 672.9 433 74.1
C05p50300 Brassica napus HOM05D004680 ORTHO05D005939 1.6e-191 672.9 433 74.1
DCAR_023071 Daucus carota HOM05D004680 ORTHO05D005939 2.1e-191 672.5 431 74.5
PSO782G2876 Papaver somniferum HOM05D004680 ORTHO05D005939 2.7e-191 672.2 404 77.7
arahy.Tifrunner.gnm1.ann1.0TRA3C Arachis hypogaea HOM05D004680 ORTHO05D005939 6.1e-191 671.0 364 83.0
A01p37900 Brassica napus HOM05D004680 ORTHO05D005939 1.0e-190 670.2 433 73.4
Sed0024237 Sechium edule HOM05D004680 ORTHO05D005939 1.0e-190 670.2 430 75.3
arahy.Tifrunner.gnm1.ann1.I8Y04W Arachis hypogaea HOM05D004680 ORTHO05D005939 1.4e-190 669.8 364 83.0
BraA01t03850Z Brassica rapa HOM05D004680 ORTHO05D005939 1.8e-190 669.5 433 73.4
Gohir.A10G067300 Gossypium hirsutum HOM05D004680 ORTHO05D005939 2.3e-190 669.1 408 77.0
TWI12G0154 Tripterygium wilfordii HOM05D004680 ORTHO05D005939 2.3e-190 669.1 438 74.0
CDE02G3046 Ceratophyllum demersum HOM05D004680 ORTHO05D005939 5.1e-190 667.9 433 72.3
BolC1t04776H Brassica oleracea HOM05D004680 ORTHO05D005939 6.7e-190 667.5 433 73.4
ECA247G0440 Erigeron canadensis HOM05D004680 ORTHO05D005939 6.7e-190 667.5 399 77.9
Duzib235G0372 Durio zibethinus HOM05D004680 ORTHO05D005939 8.8e-190 667.2 408 77.5
BolC5t33780H Brassica oleracea HOM05D004680 ORTHO05D005939 5.7e-189 664.5 436 72.7
C01p48080 Brassica napus HOM05D004680 ORTHO05D005939 7.4e-189 664.1 433 73.2
ATR0315G163 Amborella trichopoda HOM05D004680 ORTHO05D005939 6.3e-188 661.0 376 80.9
Aa31LG8G3340 Aethionema arabicum HOM05D004680 ORTHO05D005939 3.1e-187 658.7 426 72.8
MBI04_g14933_MAGBIO Magnolia biondii HOM05D004680 ORTHO05D005939 3.2e-184 648.7 376 80.9
unitig_899.g14773 Utricularia gibba HOM05D004680 ORTHO05D005939 4.7e-183 644.8 416 72.6
SGA_v2.0_scaffold5G02541 Striga asiatica HOM05D004680 ORTHO05D005939 3.3e-181 638.6 440 70.7
Lsat_1_v5_gn_4_101400 Lactuca sativa HOM05D004680 ORTHO05D005939 2.2e-177 625.9 420 70.7
Manes.04G131400 Manihot esculenta HOM05D004680 ORTHO05D005939 8.5e-177 624.0 444 68.9
Actinidia21693 Actinidia chinensis HOM05D004680 ORTHO05D005939 1.4e-176 623.2 349 82.8
QL11p016400 Quercus lobata HOM05D004680 ORTHO05D005939 9.4e-176 620.5 326 86.5
Atru.BG.177.p Acer truncatum HOM05D004680 ORTHO05D005939 2.0e-173 612.8 322 86.3
HPP92_021671 Vanilla planifolia HOM05D004680 ORTHO05D005939 1.5e-168 596.7 421 67.2
Dinv38006 Davidia involucrata HOM05D004680 ORTHO05D005939 7.5e-165 584.3 335 83.9
SEGI_20570 Sequoiadendron giganteum HOM05D004680 ORTHO05D005939 1.1e-160 570.5 400 65.8
Zm00001eb270670 Zea mays HOM05D004680 ORTHO05D005939 1.1e-160 570.5 412 67.0
CiPaw.01G234300 Carya illinoinensis HOM05D004680 ORTHO05D005939 3.0e-158 562.4 290 86.9
FAN05G4921 Fragaria x ananassa HOM05D004680 ORTHO05D005939 5.7e-157 558.1 288 87.2
Psat5g297320 Pisum sativum HOM05D004680 ORTHO05D005939 1.7e-156 556.6 290 86.2
Hma1.2p1_1617F.1_g293780 Hydrangea macrophylla HOM05D004680 ORTHO05D005939 2.1e-151 539.7 386 71.0
SHI25904 Sapria himalayana HOM05D004680 ORTHO05D005939 2.2e-148 529.6 290 81.0
SMO147G0400 Selaginella moellendorffii HOM05D004680 ORTHO05D005939 7.5e-141 504.6 332 66.9
COL.COLO4_30464 Corchorus olitorius HOM05D004680 ORTHO05D005939 5.4e-139 498.4 265 85.3
Haze_16340 Corylus avellana HOM05D004680 ORTHO05D005939 7.3e-128 461.5 300 75.7
Sc12g0009700 Simmondsia chinensis HOM05D004680 ORTHO05D005939 4.0e-126 455.7 293 72.0
Pp3c17_20690 Physcomitrium patens HOM05D004680 ORTHO05D005939 1.1e-123 447.6 374 54.0
AagrBONN_evm.TU.Sc2ySwM_369.193 Anthoceros agrestis HOM05D004680 ORTHO05D005939 5.1e-121 438.7 285 67.7
Gohir.D05G132300 Gossypium hirsutum HOM05D004680 ORTHO05D005939 9.9e-117 424.5 272 73.5
SMO358G0106 Selaginella moellendorffii HOM05D004680 ORTHO05D005939 9.0e-110 401.4 336 53.3
SMO077G0005 Selaginella moellendorffii HOM05D004680 ORTHO05D005939 5.1e-97 359.0 322 53.1
HPP92_008141 Vanilla planifolia HOM05D004680 ORTHO05D005939 3.8e-92 342.8 268 64.2
SMO114G0076 Selaginella moellendorffii HOM05D004680 ORTHO05D005939 1.1e-88 331.3 339 46.9
Haze_11589 Corylus avellana HOM05D004680 ORTHO05D005939 2.6e-69 266.9 138 87.0
Oeu063940.2 Olea europaea HOM05D004680 ORTHO05D007319 1.4e-65 254.6 179 68.2
TWI75G1313 Tripterygium wilfordii HOM05D004680 ORTHO05D005939 1.2e-53 214.9 109 85.3
PGSC0003DMG400007734 Solanum tuberosum HOM05D004680 ORTHO05D005939 2.9e-52 210.3 123 77.2
HPP92_008142 Vanilla planifolia HOM05D004680 ORTHO05D005939 2.9e-52 210.3 123 77.2
SEGI_33813 Sequoiadendron giganteum HOM05D004680 ORTHO05D005939 1.5e-48 198.0 136 65.4
Oeu040360.1 Olea europaea HOM05D004680 ORTHO05D011268 2.8e-47 193.7 127 71.7
Hma1.2p1_1576F.1_g291660 Hydrangea macrophylla HOM05D004680 ORTHO05D005939 2.0e-32 144.4 85 77.6
Hma1.2p1_0033F.1_g020650 Hydrangea macrophylla HOM05D004680 ORTHO05D005939 5.7e-32 142.9 85 76.5
Zm00001eb389580 Zea mays HOM05D004680 ORTHO05D000383 5.6e-27 126.3 80 68.8
Atru.chr1.3422 Acer truncatum HOM05D004680 ORTHO05D005939 8.9e-25 119.0 101 57.4
HanXRQChr10g0311001 Helianthus annuus HOM05D004680 ORTHO05D005939 2.2e-15 87.8 109 46.8
Solyc07g014600.2 Solanum lycopersicum HOM05D004680 ORTHO05D005939 6.0e-13 79.7 52 71.2
Actinidia21694 Actinidia chinensis HOM05D014184 ORTHO05D015797 7.6e-08 62.8 44 72.7


User provided reference genes

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