Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0028309 Camellia sinensis var. sinensis HOM05D007043 ORTHO05D008951 2.6e-101 372.1 189 100.0
CSS0014664 Camellia sinensis var. sinensis HOM05D007043 ORTHO05D008951 7.4e-101 370.5 189 99.5
Hma1.2p1_0678F.1_g202140 Hydrangea macrophylla HOM05D007043 ORTHO05D008951 2.5e-80 302.4 191 79.6
TAR625G0503 Trochodendron aralioides HOM05D007043 ORTHO05D008951 7.5e-77 290.8 191 77.0
vmacro21135 Vaccinium macrocarpon HOM05D007043 ORTHO05D008951 7.5e-77 290.8 192 78.6
vmacro22650 Vaccinium macrocarpon HOM05D007043 ORTHO05D008951 7.5e-77 290.8 192 78.6
Peaxi162Scf00360g00918 Petunia axillaris HOM05D007043 ORTHO05D008951 2.2e-76 289.3 189 78.3
CAN.G1183.21 Capsicum annuum HOM05D007043 ORTHO05D008951 7.0e-75 284.3 201 72.6
PSO170G2334 Papaver somniferum HOM05D007043 ORTHO05D008951 9.2e-75 283.9 192 75.0
Solyc04g072039.1 Solanum lycopersicum HOM05D007043 ORTHO05D008951 3.5e-74 282.0 198 73.7
Cc10_g06450 Coffea canephora HOM05D007043 ORTHO05D008951 1.0e-73 280.4 194 74.7
Potri.005G198400 Populus trichocarpa HOM05D007043 ORTHO05D008951 1.7e-73 279.6 191 73.8
vmacro21134 Vaccinium macrocarpon HOM05D007043 ORTHO05D008951 1.7e-73 279.6 216 71.3
Sopen04g028120 Solanum pennellii HOM05D007043 ORTHO05D008951 2.3e-73 279.3 198 73.2
GSVIVG01013701001 Vitis vinifera HOM05D007043 ORTHO05D008951 2.9e-73 278.9 189 75.1
ClCG08G007230 Citrullus lanatus HOM05D007043 ORTHO05D008951 3.8e-73 278.5 191 73.8
PSO210G5925 Papaver somniferum HOM05D007043 ORTHO05D008951 6.6e-73 277.7 192 73.4
SalBow6G0078 Salvia bowleyana HOM05D007043 ORTHO05D008951 6.6e-73 277.7 191 74.9
PGSC0003DMG400025055 Solanum tuberosum HOM05D007043 ORTHO05D008951 8.6e-73 277.3 200 72.5
vmacro22651 Vaccinium macrocarpon HOM05D007043 ORTHO05D008951 1.9e-72 276.2 202 74.8
Migut.N02945 Erythranthe guttata HOM05D007043 ORTHO05D008951 2.5e-72 275.8 191 72.8
Ciclev10002599m.g Citrus clementina HOM05D007043 ORTHO05D008951 9.5e-72 273.9 191 72.8
Phvul.007G084700 Phaseolus vulgaris HOM05D007043 ORTHO05D008951 1.2e-71 273.5 191 73.3
unitig_52.g17176 Utricularia gibba HOM05D007043 ORTHO05D008951 2.1e-71 272.7 189 71.4
Aqoxy5G02008 Aquilegia oxysepala HOM05D007043 ORTHO05D008951 2.8e-71 272.3 191 72.8
CsaV3_6G004900 Cucumis sativus L. HOM05D007043 ORTHO05D008951 2.8e-71 272.3 191 73.8
Atru.chr13.1985 Acer truncatum HOM05D007043 ORTHO05D008951 3.6e-71 271.9 191 71.7
Sed0011039 Sechium edule HOM05D007043 ORTHO05D008951 3.6e-71 271.9 189 72.5
Duzib093G0431 Durio zibethinus HOM05D007043 ORTHO05D008951 4.7e-71 271.6 191 71.7
Glyma.10G220400 Glycine max HOM05D007043 ORTHO05D008951 6.1e-71 271.2 185 75.7
Medtr1g097460 Medicago truncatula HOM05D007043 ORTHO05D008951 1.4e-70 270.0 191 71.7
MELO3C019966.2 Cucumis melo HOM05D007043 ORTHO05D008951 1.8e-70 269.6 191 72.8
Eucgr.F02676 Eucalyptus grandis HOM05D007043 ORTHO05D008951 1.8e-70 269.6 188 69.7
HanXRQChr11g0320161 Helianthus annuus HOM05D007043 ORTHO05D008951 2.3e-70 269.2 190 70.0
Cpa.g.sc26.119 Carica papaya HOM05D007043 ORTHO05D008951 3.1e-70 268.9 191 71.2
Glyma.20G171100 Glycine max HOM05D007043 ORTHO05D008951 3.1e-70 268.9 185 75.1
MD10G1037900 Malus domestica HOM05D007043 ORTHO05D008951 3.1e-70 268.9 191 69.1
Thecc.08G163200 Theobroma cacao HOM05D007043 ORTHO05D008951 3.1e-70 268.9 191 70.7
Cfa018265 Carpinus fangiana HOM05D007043 ORTHO05D008951 5.2e-70 268.1 194 69.6
arahy.Tifrunner.gnm1.ann1.T4LNKK Arachis hypogaea HOM05D007043 ORTHO05D008951 1.2e-69 266.9 191 72.3
Haze_17823 Corylus avellana HOM05D007043 ORTHO05D008951 1.2e-69 266.9 187 70.1
Gohir.A06G112300 Gossypium hirsutum HOM05D007043 ORTHO05D008951 1.5e-69 266.5 191 69.6
Psat6g189600 Pisum sativum HOM05D007043 ORTHO05D008951 1.5e-69 266.5 185 73.0
Nitab4.5_0003178g0080 Nicotiana tabacum HOM05D007043 ORTHO05D008951 2.0e-69 266.2 195 72.8
SGA_v2.0_scaffold364G49970 Striga asiatica HOM05D007043 ORTHO05D008951 3.4e-69 265.4 190 71.1
CiPaw.15G011600 Carya illinoinensis HOM05D007043 ORTHO05D008951 7.5e-69 264.2 190 69.5
Prupe.8G043500 Prunus persica HOM05D007043 ORTHO05D008951 7.5e-69 264.2 191 68.6
QL02p036540 Quercus lobata HOM05D007043 ORTHO05D008951 1.7e-68 263.1 195 69.2
QL02p037061 Quercus lobata HOM05D007043 ORTHO05D008951 1.7e-68 263.1 194 69.6
Lalb_Chr02g0141621 Lupinus albus HOM05D007043 ORTHO05D008951 4.9e-68 261.5 183 73.8
MD05G1035600 Malus domestica HOM05D007043 ORTHO05D008951 6.4e-68 261.2 192 68.8
FAN15G1248 Fragaria x ananassa HOM05D007043 ORTHO05D008951 8.3e-68 260.8 189 68.3
FAN20G1550 Fragaria x ananassa HOM05D007043 ORTHO05D008951 8.3e-68 260.8 189 68.3
VMungo0720G3009 Vigna mungo HOM05D007043 ORTHO05D008951 8.3e-68 260.8 185 72.4
arahy.Tifrunner.gnm1.ann1.7K1R9Z Arachis hypogaea HOM05D007043 ORTHO05D008951 1.1e-67 260.4 191 71.2
FAN24G2827 Fragaria x ananassa HOM05D007043 ORTHO05D008951 1.1e-67 260.4 189 68.3
TWI60G1299 Tripterygium wilfordii HOM05D007043 ORTHO05D008951 1.4e-67 260.0 187 69.0
CDE05G0687 Ceratophyllum demersum HOM05D007043 ORTHO05D008951 2.4e-67 259.2 189 68.3
BcaC08g46601 Brassica carinata HOM05D007043 ORTHO05D008951 3.2e-67 258.8 189 68.3
A07p37900 Brassica napus HOM05D007043 ORTHO05D008951 3.2e-67 258.8 189 68.3
C06p45800 Brassica napus HOM05D007043 ORTHO05D008951 3.2e-67 258.8 189 68.3
ECA232G2240 Erigeron canadensis HOM05D007043 ORTHO05D008951 3.2e-67 258.8 189 66.7
TAR625G0569 Trochodendron aralioides HOM05D007043 ORTHO05D008951 4.1e-67 258.5 191 70.7
ATR1120G076 Amborella trichopoda HOM05D007043 ORTHO05D008951 5.4e-67 258.1 191 67.5
Gohir.D06G116500 Gossypium hirsutum HOM05D007043 ORTHO05D008951 7.0e-67 257.7 191 67.5
Gorai.010G134300 Gossypium raimondii HOM05D007043 ORTHO05D008951 7.0e-67 257.7 191 67.5
Lj5g0012506 Lotus japonicus HOM05D007043 ORTHO05D008951 7.0e-67 257.7 185 71.9
Carub.0002s1851 Capsella rubella HOM05D007043 ORTHO05D008951 9.2e-67 257.3 189 67.7
RcHm_v2.0_Chr6g0273931 Rosa chinensis HOM05D007043 ORTHO05D008951 1.2e-66 256.9 189 68.8
Aa31LG4G8890 Aethionema arabicum HOM05D007043 ORTHO05D008951 2.0e-66 256.1 191 67.5
AUR62034911 Chenopodium quinoa HOM05D007043 ORTHO05D008951 2.0e-66 256.1 188 67.0
Ah.05g168310 Amaranthus hybridus HOM05D007043 ORTHO05D008951 3.5e-66 255.4 189 68.8
BraA07t31355Z Brassica rapa HOM05D007043 ORTHO05D008951 3.5e-66 255.4 196 66.3
CARHR291040 Cardamine hirsuta HOM05D007043 ORTHO05D008951 3.5e-66 255.4 189 67.7
AL2G31320 Arabidopsis lyrata HOM05D007043 ORTHO05D008951 4.6e-66 255.0 189 68.8
DCAR_016685 Daucus carota HOM05D007043 ORTHO05D008951 1.0e-65 253.8 187 66.8
Thhalv10019190m.g Eutrema salsugineum HOM05D007043 ORTHO05D008951 1.0e-65 253.8 189 68.3
Hund26674 Selenicereus undatus HOM05D007043 ORTHO05D008951 1.3e-65 253.4 188 65.4
Ca_10649_v3 Cicer arietinum L. HOM05D007043 ORTHO05D008951 3.0e-65 252.3 181 72.4
THA.LOC104800095 Tarenaya hassleriana HOM05D007043 ORTHO05D008951 3.9e-65 251.9 185 65.9
AT1G71750 Arabidopsis thaliana HOM05D007043 ORTHO05D008951 6.6e-65 251.1 199 64.8
BolC6t39632H Brassica oleracea HOM05D007043 ORTHO05D008951 1.1e-64 250.4 200 64.5
HPP92_024076 Vanilla planifolia HOM05D007043 ORTHO05D008951 1.9e-64 249.6 189 66.1
EL10Ac8g19385 Beta vulgaris HOM05D007043 ORTHO05D008951 4.3e-64 248.4 190 67.4
Actinidia15616 Actinidia chinensis HOM05D007043 ORTHO05D008951 1.2e-63 246.9 158 83.5
AUR62026618 Chenopodium quinoa HOM05D007043 ORTHO05D008951 3.6e-63 245.4 188 65.4
SHI09106 Sapria himalayana HOM05D007043 ORTHO05D008951 3.6e-63 245.4 189 66.1
Os05g0182201 Oryza sativa ssp. japonica HOM05D007043 ORTHO05D008951 4.7e-63 245.0 187 65.2
Dinv41024 Davidia involucrata HOM05D007043 ORTHO05D008951 1.5e-61 240.0 154 79.9
Lj7C386G15 Lonicera japonica HOM05D007043 ORTHO05D004353 3.4e-61 238.8 189 70.4
MBI04_g42205_MAGBIO Magnolia biondii HOM05D007043 ORTHO05D008951 7.0e-59 231.1 263 52.9
Lsat_1_v5_gn_9_42421 Lactuca sativa HOM05D007043 ORTHO05D008951 3.0e-57 225.7 191 64.4
Nitab4.5_0003443g0050 Nicotiana tabacum HOM05D007043 ORTHO05D008951 9.5e-56 220.7 156 75.6
Manes.18G095900 Manihot esculenta HOM05D007043 ORTHO05D008951 6.8e-54 214.5 158 72.2
Nn5g28865 Nelumbo nucifera HOM05D007043 ORTHO05D008951 7.5e-53 211.1 158 69.6
AagrBONN_evm.TU.Sc2ySwM_228.3072 Anthoceros agrestis HOM05D007043 ORTHO05D008951 9.2e-51 204.1 186 54.8
Sc26g0002900 Simmondsia chinensis HOM05D007043 ORTHO05D008951 9.2e-51 204.1 174 63.2
SMO011G0020 Selaginella moellendorffii HOM05D007043 ORTHO05D008951 2.7e-50 202.6 189 52.9
PGR042G2421 Punica granatum HOM05D007043 ORTHO05D008951 4.6e-50 201.8 156 67.3
Mapoly0053s0101 Marchantia polymorpha HOM05D007043 ORTHO05D008951 7.8e-50 201.1 185 55.1
FvH4_2g12860 Fragaria vesca HOM05D007043 ORTHO05D008951 3.3e-48 195.7 162 63.6
Actinidia17764 Actinidia chinensis HOM05D007043 ORTHO05D008951 4.4e-45 185.3 132 75.0
TPR.G17053 Trifolium pratense HOM05D007043 ORTHO05D008951 9.9e-45 184.1 191 54.5
CANSAT25G3234 Cannabis sativa HOM05D007043 ORTHO05D008951 4.2e-43 178.7 156 59.6
Pp3c20_5410 Physcomitrium patens HOM05D007043 ORTHO05D008951 1.6e-42 176.8 138 62.3
Zm00001eb282940 Zea mays HOM05D007043 ORTHO05D008951 1.6e-42 176.8 152 60.5
CBR_g38956 Chara braunii HOM05D007043 ORTHO05D008951 7.8e-42 174.5 194 51.0
Cre08.g358900 Chlamydomonas reinhardtii HOM05D007043 ORTHO05D008951 1.5e-40 170.2 192 49.0
Cre17.g708100 Chlamydomonas reinhardtii HOM05D007043 ORTHO05D008951 1.4e-35 153.7 190 45.8
MCO13G296 Micromonas commoda HOM05D007043 ORTHO05D008951 3.0e-33 146.0 189 43.9
PRCOL_00003632 Prasinoderma coloniale HOM05D007043 ORTHO05D008951 1.9e-27 126.7 185 41.1
SGA_v2.0_scaffold364G49968 Striga asiatica HOM05D007043 ORTHO05D008951 2.1e-26 123.2 190 43.7
TPR.G793 Trifolium pratense HOM05D007043 ORTHO05D008951 2.8e-23 112.8 71 76.1
Sabra05G0151000 Salix brachista HOM05D000032 ORTHO05D004353 8.2e-15 84.7 56 78.6
Sabra02G0050800 Salix brachista HOM05D006901 ORTHO05D008582 2.4e-06 56.6 87 43.7


User provided reference genes

Program Settings