Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0028242 Camellia sinensis var. sinensis HOM05D008893 ORTHO05D001383 7.1e-104 380.6 187 100.0
RhsimUnG0112200 Rhododendron simsii HOM05D008893 ORTHO05D001383 3.7e-36 155.6 130 54.6
Rhsim07G0161100 Rhododendron simsii HOM05D008893 ORTHO05D001383 5.0e-33 145.2 130 50.0
Actinidia37442 Actinidia chinensis HOM05D008893 ORTHO05D001383 7.3e-32 141.4 138 52.2
Thecc.02G247600 Theobroma cacao HOM05D008893 ORTHO05D001383 9.8e-29 131.0 132 50.8
Dinv04567 Davidia involucrata HOM05D000047 ORTHO05D001383 6.4e-28 128.3 130 46.9
Hma1.2p1_0124F.1_g058270 Hydrangea macrophylla HOM05D008893 ORTHO05D001383 2.0e-26 123.2 103 53.4
Dinv40638 Davidia involucrata HOM05D008893 ORTHO05D001383 5.0e-25 118.6 131 43.5
Hma1.2p1_0462F.1_g157950 Hydrangea macrophylla HOM05D008893 ORTHO05D001383 6.6e-25 118.2 110 51.8
QL07p033801 Quercus lobata HOM05D000047 ORTHO05D000044 6.6e-25 118.2 128 44.5
FvH4_4g17921 Fragaria vesca HOM05D013226 ORTHO05D001383 1.9e-24 116.7 188 35.1
QL02p013119 Quercus lobata HOM05D000560 ORTHO05D000417 1.9e-24 116.7 132 45.5
FvH4_1g29804 Fragaria vesca HOM05D013226 ORTHO05D001383 9.5e-24 114.4 126 41.3
Dinv05873 Davidia involucrata HOM05D008893 ORTHO05D001383 2.1e-23 113.2 111 45.9
FvH4_4g02081 Fragaria vesca HOM05D013226 ORTHO05D001383 5.2e-22 108.6 133 40.6
TAR260G0005 Trochodendron aralioides HOM05D000489 ORTHO05D000372 2.0e-21 106.7 149 40.3
Dinv03978 Davidia involucrata HOM05D008893 ORTHO05D001383 5.8e-21 105.1 131 43.5
Dinv23995 Davidia involucrata HOM05D008893 ORTHO05D001383 3.7e-20 102.4 114 44.7
Hma1.2p1_0264F.1_g105865 Hydrangea macrophylla HOM05D008893 ORTHO05D001383 1.4e-19 100.5 79 55.7
Dinv08376 Davidia involucrata HOM05D008893 ORTHO05D001383 9.2e-19 97.8 105 44.8
PSO339G3951 Papaver somniferum HOM05D009560 ORTHO05D001383 4.6e-18 95.5 101 46.5
PSO339G2430 Papaver somniferum HOM05D009560 ORTHO05D001383 6.0e-18 95.1 101 47.5
Actinidia21382 Actinidia chinensis HOM05D008893 ORTHO05D001383 1.3e-17 94.0 81 48.1
Thecc.02G180800 Theobroma cacao HOM05D022848 ORTHO05D001383 1.3e-17 94.0 120 42.5
CANSAT25G2429 Cannabis sativa HOM05D000047 ORTHO05D001383 2.3e-17 93.2 78 50.0
PSO782G1746 Papaver somniferum HOM05D009560 ORTHO05D001383 1.1e-16 90.9 101 43.6
Dinv11348 Davidia involucrata HOM05D008893 ORTHO05D000352 1.5e-16 90.5 102 40.2
Hma1.2p1_3902F.1_g337930 Hydrangea macrophylla HOM05D008893 ORTHO05D001383 1.9e-16 90.1 73 54.8
Rhsim09G0043700 Rhododendron simsii HOM05D001718 ORTHO05D008006 1.9e-16 90.1 124 38.7
PSO513G0040 Papaver somniferum HOM05D000047 ORTHO05D001383 1.2e-15 87.4 100 42.0
PSO063G7603 Papaver somniferum HOM05D009560 ORTHO05D001383 3.6e-15 85.9 101 44.6
PSO017G5958 Papaver somniferum HOM05D009560 ORTHO05D001383 4.7e-15 85.5 104 43.3
Dinv04605 Davidia involucrata HOM05D008893 ORTHO05D001383 1.1e-14 84.3 114 36.0
PSO063G0571 Papaver somniferum HOM05D009560 ORTHO05D001383 1.4e-14 84.0 101 40.6
PSO384G4679 Papaver somniferum HOM05D009560 ORTHO05D001383 3.1e-14 82.8 101 41.6
PSO339G5462 Papaver somniferum HOM05D000047 ORTHO05D001383 5.2e-14 82.0 126 37.3
QL07p033814 Quercus lobata HOM05D000047 ORTHO05D000044 5.2e-14 82.0 101 36.6
PSO541G1592 Papaver somniferum HOM05D009560 ORTHO05D001383 8.9e-14 81.3 101 41.6
PSO675G4592 Papaver somniferum HOM05D009560 ORTHO05D001383 8.9e-14 81.3 100 42.0
QL04p030580 Quercus lobata HOM05D000047 ORTHO05D000044 8.9e-14 81.3 101 36.6
QL05p044848 Quercus lobata HOM05D000047 ORTHO05D000044 8.9e-14 81.3 101 36.6
QL06p007831 Quercus lobata HOM05D000047 ORTHO05D000044 8.9e-14 81.3 101 36.6
Sopen06g013120 Solanum pennellii HOM05D000047 ORTHO05D001383 1.5e-13 80.5 101 36.6
PSO339G3029 Papaver somniferum HOM05D009560 ORTHO05D001383 2.0e-13 80.1 104 38.5
QL93p0305_0012 Quercus lobata HOM05D000047 ORTHO05D000044 2.6e-13 79.7 101 36.6
Hund05906 Selenicereus undatus HOM05D000047 ORTHO05D001383 2.6e-13 79.7 101 38.6
PSO700G0104 Papaver somniferum HOM05D009560 ORTHO05D001383 4.4e-13 79.0 104 39.4
Sopen01g019760 Solanum pennellii HOM05D000047 ORTHO05D000044 4.4e-13 79.0 101 36.6
QL01p017897 Quercus lobata HOM05D000047 ORTHO05D000044 5.8e-13 78.6 101 35.6
QL12p042854 Quercus lobata HOM05D000047 ORTHO05D000044 5.8e-13 78.6 98 36.7
Sopen05g008560 Solanum pennellii HOM05D000047 ORTHO05D001383 9.9e-13 77.8 101 36.6
Sopen12g012050 Solanum pennellii HOM05D000047 ORTHO05D001383 9.9e-13 77.8 101 36.6
Thecc.05G114100 Theobroma cacao HOM05D022848 ORTHO05D001383 9.9e-13 77.8 72 50.0
QL06p019599 Quercus lobata HOM05D000047 ORTHO05D000044 1.3e-12 77.4 101 35.6
QL93p0181_0006 Quercus lobata HOM05D000047 ORTHO05D000044 1.3e-12 77.4 101 35.6
Sopen12g017880 Solanum pennellii HOM05D000047 ORTHO05D001383 1.3e-12 77.4 98 37.8
Dinv01812 Davidia involucrata HOM05D008893 ORTHO05D001383 1.7e-12 77.0 115 34.8
PSO782G2789 Papaver somniferum HOM05D009560 ORTHO05D001383 1.7e-12 77.0 101 40.6
Sopen04g022080 Solanum pennellii HOM05D000047 ORTHO05D001383 1.7e-12 77.0 101 35.6
Sopen04g012780 Solanum pennellii HOM05D000047 ORTHO05D001383 2.2e-12 76.6 101 35.6
Sopen09g021660 Solanum pennellii HOM05D000004 ORTHO05D000002 2.2e-12 76.6 101 35.6
Sopen01g006520 Solanum pennellii HOM05D000047 ORTHO05D001383 2.9e-12 76.3 101 35.6
Sopen03g014800 Solanum pennellii HOM05D000047 ORTHO05D000044 2.9e-12 76.3 101 35.6
Sopen03g021380 Solanum pennellii HOM05D000047 ORTHO05D000044 2.9e-12 76.3 101 35.6
Sopen04g021500 Solanum pennellii HOM05D000047 ORTHO05D001383 2.9e-12 76.3 101 35.6
Sopen05g018330 Solanum pennellii HOM05D000047 ORTHO05D000044 2.9e-12 76.3 101 35.6
Sopen06g006890 Solanum pennellii HOM05D000047 ORTHO05D001383 2.9e-12 76.3 101 35.6
Sopen06g009330 Solanum pennellii HOM05D000047 ORTHO05D000044 2.9e-12 76.3 101 35.6
Sopen07g020380 Solanum pennellii HOM05D000047 ORTHO05D001383 2.9e-12 76.3 101 35.6
Sopen08g008120 Solanum pennellii HOM05D000047 ORTHO05D000044 2.9e-12 76.3 101 35.6
Sopen09g022170 Solanum pennellii HOM05D000047 ORTHO05D001383 2.9e-12 76.3 101 35.6
Sopen10g013080 Solanum pennellii HOM05D000047 ORTHO05D001383 2.9e-12 76.3 101 35.6
Sopen01g018380 Solanum pennellii HOM05D000047 ORTHO05D001383 3.7e-12 75.9 101 35.6
Sopen04g024170 Solanum pennellii HOM05D000047 ORTHO05D001383 3.7e-12 75.9 101 34.7
Dinv13552 Davidia involucrata HOM05D008893 ORTHO05D001383 4.9e-12 75.5 96 37.5
FvH4_6g13112 Fragaria vesca HOM05D000047 ORTHO05D001383 4.9e-12 75.5 101 35.6
MBI10_g19826_MAGBIO Magnolia biondii HOM05D008568 ORTHO05D006740 4.9e-12 75.5 131 35.1
Sopen01g018560 Solanum pennellii HOM05D000047 ORTHO05D001383 4.9e-12 75.5 101 35.6
Sopen05g020260 Solanum pennellii HOM05D000047 ORTHO05D000044 4.9e-12 75.5 102 35.3
Hund05696 Selenicereus undatus HOM05D000070 ORTHO05D001383 6.4e-12 75.1 94 38.3
Sopen09g012580 Solanum pennellii HOM05D000047 ORTHO05D001383 6.4e-12 75.1 101 35.6
Sopen09g024060 Solanum pennellii HOM05D000047 ORTHO05D001383 6.4e-12 75.1 93 37.6
Sopen11g011000 Solanum pennellii HOM05D000047 ORTHO05D001383 6.4e-12 75.1 98 36.7
Sopen12g025220 Solanum pennellii HOM05D000047 ORTHO05D001383 6.4e-12 75.1 101 35.6
FvH4_6g53791 Fragaria vesca HOM05D000047 ORTHO05D001383 8.4e-12 74.7 101 35.6
Sopen06g011440 Solanum pennellii HOM05D000047 ORTHO05D000044 8.4e-12 74.7 101 35.6
Sopen05g013390 Solanum pennellii HOM05D000047 ORTHO05D001383 1.1e-11 74.3 101 34.7
Sopen08g010280 Solanum pennellii HOM05D000047 ORTHO05D001383 1.1e-11 74.3 101 35.6
Hund10359 Selenicereus undatus HOM05D000047 ORTHO05D001383 1.4e-11 73.9 101 36.6
Sopen02g002310 Solanum pennellii HOM05D000047 ORTHO05D001383 1.4e-11 73.9 149 29.5
Sopen02g013290 Solanum pennellii HOM05D000047 ORTHO05D001383 1.4e-11 73.9 100 37.0
Sopen03g018790 Solanum pennellii HOM05D000047 ORTHO05D001383 1.4e-11 73.9 101 34.7
Potri.001G184575 Populus trichocarpa HOM05D000047 ORTHO05D001383 1.9e-11 73.6 185 26.5
Sopen01g008330 Solanum pennellii HOM05D000047 ORTHO05D001383 1.9e-11 73.6 93 36.6
Sopen02g010170 Solanum pennellii HOM05D000047 ORTHO05D001383 1.9e-11 73.6 93 36.6
Sopen07g006060 Solanum pennellii HOM05D000047 ORTHO05D000044 1.9e-11 73.6 93 36.6
Sopen10g021270 Solanum pennellii HOM05D000047 ORTHO05D001383 1.9e-11 73.6 93 36.6
Sopen04g011740 Solanum pennellii HOM05D000047 ORTHO05D000044 3.2e-11 72.8 101 34.7
Sopen07g025200 Solanum pennellii HOM05D000047 ORTHO05D001383 3.2e-11 72.8 101 34.7
Sopen10g027330 Solanum pennellii HOM05D000047 ORTHO05D001383 3.2e-11 72.8 101 34.7
Hund15656 Selenicereus undatus HOM05D000047 ORTHO05D001383 4.1e-11 72.4 101 34.7
Sopen02g008560 Solanum pennellii HOM05D000047 ORTHO05D000044 4.1e-11 72.4 101 33.7
Sopen08g015290 Solanum pennellii HOM05D000047 ORTHO05D001383 4.1e-11 72.4 101 34.7
Potri.010G156001 Populus trichocarpa HOM05D000047 ORTHO05D001383 5.4e-11 72.0 180 28.3
Sopen09g008960 Solanum pennellii HOM05D000047 ORTHO05D001383 5.4e-11 72.0 101 34.7
RcHm_v2.0_Chr6g0263201 Rosa chinensis HOM05D009186 ORTHO05D011460 7.1e-11 71.6 107 34.6
Hund09920 Selenicereus undatus HOM05D000047 ORTHO05D001383 7.1e-11 71.6 101 35.6
arahy.Tifrunner.gnm1.ann1.RW3FWP Arachis hypogaea HOM05D003133 ORTHO05D001383 9.2e-11 71.2 91 39.6
Sopen01g017640 Solanum pennellii HOM05D000047 ORTHO05D001383 9.2e-11 71.2 101 34.7
Sopen06g006810 Solanum pennellii HOM05D000047 ORTHO05D001383 9.2e-11 71.2 93 33.3
Sopen10g007420 Solanum pennellii HOM05D000047 ORTHO05D001383 9.2e-11 71.2 97 35.1
Sopen10g018840 Solanum pennellii HOM05D000047 ORTHO05D001383 9.2e-11 71.2 93 35.5
Sopen02g008570 Solanum pennellii HOM05D000047 ORTHO05D001383 1.2e-10 70.9 101 32.7
Sopen10g015700 Solanum pennellii HOM05D000047 ORTHO05D001383 1.2e-10 70.9 93 35.5
Sopen08g008240 Solanum pennellii HOM05D000047 ORTHO05D001383 1.6e-10 70.5 101 33.7
MELO3C033014.2 Cucumis melo HOM05D000047 ORTHO05D001383 2.7e-10 69.7 101 33.7
MBI10_g39502_MAGBIO Magnolia biondii HOM05D008568 ORTHO05D006740 2.7e-10 69.7 97 36.1
MBI11_g23658_MAGBIO Magnolia biondii HOM05D008568 ORTHO05D006740 2.7e-10 69.7 139 27.3
Sopen11g023890 Solanum pennellii HOM05D000047 ORTHO05D000044 3.5e-10 69.3 101 34.7
FvH4_4g25732 Fragaria vesca HOM05D000047 ORTHO05D001383 4.6e-10 68.9 165 26.7
PSO591G0406 Papaver somniferum HOM05D009560 ORTHO05D001383 4.6e-10 68.9 62 48.4
Potri.001G433100 Populus trichocarpa HOM05D000047 ORTHO05D001383 4.6e-10 68.9 185 25.4
TWI18G1375 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 4.6e-10 68.9 151 29.8
Dinv06037 Davidia involucrata HOM05D008893 ORTHO05D001383 6.0e-10 68.6 114 31.6
MBI08_g01197_MAGBIO Magnolia biondii HOM05D008568 ORTHO05D006740 6.0e-10 68.6 100 35.0
TWI12G0387 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 6.0e-10 68.6 151 29.8
FvH4_2g15191 Fragaria vesca HOM05D000047 ORTHO05D001383 1.3e-09 67.4 101 32.7
Sopen05g010090 Solanum pennellii HOM05D000047 ORTHO05D001383 1.7e-09 67.0 93 36.6
Sopen11g019170 Solanum pennellii HOM05D000047 ORTHO05D001383 2.3e-09 66.6 178 26.4
FvH4_3g31360 Fragaria vesca HOM05D002894 ORTHO05D002579 3.0e-09 66.2 110 30.0
Sopen08g007090 Solanum pennellii HOM05D000047 ORTHO05D001383 3.0e-09 66.2 175 26.9
MBI19_g25655_MAGBIO Magnolia biondii HOM05D008568 ORTHO05D006740 3.9e-09 65.9 92 38.0
CSS0009928 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000352 5.1e-09 65.5 48 58.3
CSS0038410 Camellia sinensis var. sinensis HOM05D019952 ORTHO05D001383 6.6e-09 65.1 88 37.5
CSS0007020 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000352 8.6e-09 64.7 42 66.7
Potri.018G077983 Populus trichocarpa HOM05D000047 ORTHO05D001383 8.6e-09 64.7 119 29.4
MBI10_g29814_MAGBIO Magnolia biondii HOM05D008568 ORTHO05D006740 1.1e-08 64.3 119 31.1
Sopen02g008270 Solanum pennellii HOM05D000047 ORTHO05D000044 1.1e-08 64.3 93 33.3
FvH4_1g29791 Fragaria vesca HOM05D000047 ORTHO05D001383 1.5e-08 63.9 107 32.7
Sopen02g009500 Solanum pennellii HOM05D000047 ORTHO05D001383 1.5e-08 63.9 117 33.3
Sopen08g019000 Solanum pennellii HOM05D000047 ORTHO05D001383 1.9e-08 63.5 97 30.9
Rhsim02G0166900 Rhododendron simsii HOM05D000047 ORTHO05D000352 2.5e-08 63.2 99 31.3
CANSAT54G2851 Cannabis sativa HOM05D008471 ORTHO05D002579 3.3e-08 62.8 115 30.4
FvH4_5g22540 Fragaria vesca HOM05D000047 ORTHO05D000044 3.3e-08 62.8 128 28.1
FvH4_6g31271 Fragaria vesca HOM05D013226 ORTHO05D001383 3.3e-08 62.8 50 54.0
PSO478G5309 Papaver somniferum HOM05D009560 ORTHO05D001383 3.3e-08 62.8 68 48.5
Sopen02g013890 Solanum pennellii HOM05D000047 ORTHO05D001383 3.3e-08 62.8 176 25.6
Sopen10g005940 Solanum pennellii HOM05D000047 ORTHO05D011806 3.3e-08 62.8 84 36.9
CSS0026534 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000352 4.3e-08 62.4 42 61.9
Gohir.D11G272233 Gossypium hirsutum HOM05D022848 ORTHO05D001383 4.3e-08 62.4 118 32.2
Gorai.007G293300 Gossypium raimondii HOM05D022848 ORTHO05D001383 4.3e-08 62.4 96 37.5
CSS0012350 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000352 5.6e-08 62.0 48 56.2
PSO761G0028 Papaver somniferum HOM05D009560 ORTHO05D001383 5.6e-08 62.0 62 43.5
Rhsim05G0167000 Rhododendron simsii HOM05D046931 ORTHO05D037962 5.6e-08 62.0 72 40.3
MBI05_g30095_MAGBIO Magnolia biondii HOM05D008568 ORTHO05D006740 7.3e-08 61.6 101 33.7
Sopen10g010190 Solanum pennellii HOM05D000047 ORTHO05D001383 7.3e-08 61.6 96 32.3
MBI14_g24985_MAGBIO Magnolia biondii HOM05D008568 ORTHO05D006740 9.6e-08 61.2 131 29.0
Hund11047 Selenicereus undatus HOM05D000047 ORTHO05D001383 2.8e-07 59.7 151 28.5
Sopen10g020080 Solanum pennellii HOM05D000002 ORTHO05D010949 2.8e-07 59.7 124 30.6
Hund00874 Selenicereus undatus HOM05D000047 ORTHO05D001383 4.7e-07 58.9 75 34.7
Sopen08g005540 Solanum pennellii HOM05D000047 ORTHO05D001383 6.2e-07 58.5 100 31.0
TWI38G1206 Tripterygium wilfordii HOM05D000047 ORTHO05D014218 1.8e-06 57.0 100 30.0
Cfa012480 Carpinus fangiana HOM05D013226 ORTHO05D001383 4.0e-06 55.8 52 44.2
PSO478G3296 Papaver somniferum HOM05D000047 ORTHO05D000352 4.0e-06 55.8 58 43.1
MBI05_g18064_MAGBIO Magnolia biondii HOM05D008568 ORTHO05D006740 8.9e-06 54.7 84 36.9


User provided reference genes

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