Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0028234 Camellia sinensis var. sinensis HOM05D006801 ORTHO05D008490 4.0e-92 341.3 157 100.0
TWI74G0346 Tripterygium wilfordii HOM05D006801 ORTHO05D008490 3.7e-69 265.0 167 76.6
Prupe.6G281700 Prunus persica HOM05D006801 ORTHO05D008490 1.8e-68 262.7 167 73.1
Cpa.g.sc120.28 Carica papaya HOM05D006801 ORTHO05D008490 2.4e-68 262.3 170 73.5
Ciclev10012687m.g Citrus clementina HOM05D006801 ORTHO05D008490 3.1e-68 261.9 170 74.1
DCAR_028865 Daucus carota HOM05D006801 ORTHO05D008490 6.9e-68 260.8 170 75.3
RcHm_v2.0_Chr3g0462371 Rosa chinensis HOM05D006801 ORTHO05D008490 2.6e-67 258.8 166 71.7
Lj2A70T41 Lonicera japonica HOM05D006801 ORTHO05D008490 1.0e-66 256.9 170 72.9
MD04G1161900 Malus domestica HOM05D006801 ORTHO05D008490 1.3e-66 256.5 167 73.7
TAR140G0003 Trochodendron aralioides HOM05D006801 ORTHO05D008490 1.7e-66 256.1 170 72.9
TAR623G0428 Trochodendron aralioides HOM05D006801 ORTHO05D008490 1.7e-66 256.1 170 72.9
Cc06_g01030 Coffea canephora HOM05D006801 ORTHO05D008490 2.9e-66 255.4 171 70.8
Haze_21041 Corylus avellana HOM05D006801 ORTHO05D008490 8.4e-66 253.8 167 73.7
QL07p034435 Quercus lobata HOM05D006801 ORTHO05D008490 1.9e-65 252.7 166 73.5
arahy.Tifrunner.gnm1.ann1.711CF1 Arachis hypogaea HOM05D006801 ORTHO05D008490 1.2e-64 250.0 169 70.4
arahy.Tifrunner.gnm1.ann1.SWS1EB Arachis hypogaea HOM05D006801 ORTHO05D008490 1.6e-64 249.6 169 70.4
Cfa017164 Carpinus fangiana HOM05D006801 ORTHO05D008490 3.5e-64 248.4 167 72.5
Manes.09G108600 Manihot esculenta HOM05D006801 ORTHO05D008490 4.6e-64 248.1 166 70.5
FvH4_6g11060 Fragaria vesca HOM05D006801 ORTHO05D008490 6.0e-64 247.7 167 68.3
FAN14G3154 Fragaria x ananassa HOM05D006801 ORTHO05D008490 6.0e-64 247.7 167 68.3
HanXRQChr10g0291491 Helianthus annuus HOM05D006801 ORTHO05D008490 7.9e-64 247.3 168 69.6
Nitab4.5_0005348g0010 Nicotiana tabacum HOM05D006801 ORTHO05D008490 1.0e-63 246.9 168 71.4
CiPaw.10G158900 Carya illinoinensis HOM05D006801 ORTHO05D008490 1.8e-63 246.1 168 73.2
Lsat_1_v5_gn_9_35501 Lactuca sativa HOM05D006801 ORTHO05D008490 2.3e-63 245.7 167 70.1
GSVIVG01030332001 Vitis vinifera HOM05D006801 ORTHO05D008490 3.9e-63 245.0 167 71.3
CAN.G41.4 Capsicum annuum HOM05D006801 ORTHO05D008490 6.7e-63 244.2 168 70.2
ECA247G2271 Erigeron canadensis HOM05D006801 ORTHO05D008490 6.7e-63 244.2 171 69.6
Oeu033563.1 Olea europaea HOM05D006801 ORTHO05D008490 8.7e-63 243.8 170 70.0
COL.COLO4_14495 Corchorus olitorius HOM05D006801 ORTHO05D008490 3.3e-62 241.9 170 67.6
TPR.G8225 Trifolium pratense HOM05D006801 ORTHO05D008490 3.3e-62 241.9 169 68.0
Peaxi162Scf01132g00023 Petunia axillaris HOM05D006801 ORTHO05D008490 5.7e-62 241.1 168 70.2
Lj3g0017579 Lotus japonicus HOM05D006801 ORTHO05D008490 2.8e-61 238.8 169 68.0
Psat7g243680 Pisum sativum HOM05D006801 ORTHO05D008490 6.3e-61 237.7 169 66.3
Nn2g13198 Nelumbo nucifera HOM05D006801 ORTHO05D008490 2.4e-60 235.7 168 69.6
Medtr4g017650 Medicago truncatula HOM05D006801 ORTHO05D008490 3.1e-60 235.3 169 66.9
VMungo0331G1898 Vigna mungo HOM05D006801 ORTHO05D008490 3.1e-60 235.3 170 68.8
Ca_20198_v3 Cicer arietinum L. HOM05D006801 ORTHO05D008490 9.0e-60 233.8 169 65.7
Atru.chr8.2288 Acer truncatum HOM05D006801 ORTHO05D008490 1.2e-59 233.4 162 68.5
Lalb_Chr12g0207061 Lupinus albus HOM05D006801 ORTHO05D008490 1.2e-59 233.4 169 65.7
Gohir.A04G094200 Gossypium hirsutum HOM05D006801 ORTHO05D008490 1.5e-59 233.0 170 65.3
Thecc.05G010700 Theobroma cacao HOM05D006801 ORTHO05D008490 1.5e-59 233.0 170 66.5
ClCG10G022380 Citrullus lanatus HOM05D006801 ORTHO05D008490 2.6e-59 232.3 166 70.5
Potri.016G121000 Populus trichocarpa HOM05D006801 ORTHO05D008490 4.5e-59 231.5 166 67.5
Eucgr.A00595 Eucalyptus grandis HOM05D006801 ORTHO05D008490 1.0e-58 230.3 167 68.3
Gorai.012G117400 Gossypium raimondii HOM05D006801 ORTHO05D008490 1.0e-58 230.3 170 64.1
ECA247G3879 Erigeron canadensis HOM05D006801 ORTHO05D008490 1.3e-58 229.9 170 65.9
CsaV3_3G033500 Cucumis sativus L. HOM05D006801 ORTHO05D008490 1.7e-58 229.6 164 69.5
Gohir.D04G133600 Gossypium hirsutum HOM05D006801 ORTHO05D008490 5.0e-58 228.0 170 63.5
MSTRG.18989 Avicennia marina HOM05D006801 ORTHO05D008490 6.5e-58 227.6 171 67.3
Gorai.002G264900 Gossypium raimondii HOM05D006801 ORTHO05D008490 6.5e-58 227.6 167 64.1
MELO3C009141.2 Cucumis melo HOM05D006801 ORTHO05D008490 8.5e-58 227.3 164 68.9
Phvul.010G073500 Phaseolus vulgaris HOM05D006801 ORTHO05D008490 8.5e-58 227.3 167 66.5
Aqoxy4G02453 Aquilegia oxysepala HOM05D006801 ORTHO05D008490 1.1e-57 226.9 169 68.0
Migut.J00126 Erythranthe guttata HOM05D006801 ORTHO05D008490 1.4e-57 226.5 170 66.5
Os05g0468800 Oryza sativa ssp. japonica HOM05D006801 ORTHO05D008490 1.4e-57 226.5 168 66.7
PGR031G3867 Punica granatum HOM05D006801 ORTHO05D008490 2.5e-57 225.7 167 67.1
SalBow5G2624 Salvia bowleyana HOM05D006801 ORTHO05D008490 2.5e-57 225.7 166 65.7
SalBow5G4248 Salvia bowleyana HOM05D006801 ORTHO05D008490 3.2e-57 225.3 166 65.7
Solyc09g005060.3 Solanum lycopersicum HOM05D006801 ORTHO05D008490 5.5e-57 224.6 165 66.1
CANSAT35G1909 Cannabis sativa HOM05D006801 ORTHO05D008490 7.2e-57 224.2 168 65.5
Gohir.A01G228300 Gossypium hirsutum HOM05D006801 ORTHO05D008490 9.3e-57 223.8 167 62.9
Glyma.01G123100 Glycine max HOM05D006801 ORTHO05D008490 2.7e-56 222.2 171 64.9
Sopen09g001050 Solanum pennellii HOM05D006801 ORTHO05D008490 2.7e-56 222.2 165 65.5
Glyma.03G052200 Glycine max HOM05D006801 ORTHO05D008490 7.9e-56 220.7 171 64.9
AUR62030790 Chenopodium quinoa HOM05D006801 ORTHO05D008490 2.5e-54 215.7 171 62.6
THA.LOC104816206 Tarenaya hassleriana HOM05D006801 ORTHO05D008490 2.8e-53 212.2 167 60.5
Aa31LG1G22920 Aethionema arabicum HOM05D006801 ORTHO05D008490 4.8e-53 211.5 164 62.2
PSO170G1048 Papaver somniferum HOM05D006801 ORTHO05D008490 4.8e-53 211.5 163 63.2
Sc01g0005740 Simmondsia chinensis HOM05D006801 ORTHO05D008490 4.8e-53 211.5 171 60.2
PSO724G0025 Papaver somniferum HOM05D006801 ORTHO05D008490 6.3e-53 211.1 164 64.0
BraA10t45402Z Brassica rapa HOM05D006801 ORTHO05D008490 8.2e-53 210.7 165 60.6
PSO729G0120 Papaver somniferum HOM05D006801 ORTHO05D008490 8.2e-53 210.7 165 62.4
PSO729G0014 Papaver somniferum HOM05D006801 ORTHO05D008490 1.1e-52 210.3 164 64.0
Sp6g40620 Schrenkiella parvula HOM05D006801 ORTHO05D008490 1.1e-52 210.3 161 61.5
CSS0011838 Camellia sinensis var. sinensis HOM05D006801 ORTHO05D008490 1.4e-52 209.9 162 64.2
Carub.0006s0052 Capsella rubella HOM05D006801 ORTHO05D008490 1.8e-52 209.5 162 61.1
AUR62030503 Chenopodium quinoa HOM05D006801 ORTHO05D008490 2.4e-52 209.1 171 60.8
BcaC06g31972 Brassica carinata HOM05D006801 ORTHO05D008490 4.1e-52 208.4 165 60.0
CARHR211660 Cardamine hirsuta HOM05D006801 ORTHO05D008490 6.9e-52 207.6 158 62.0
AL6G10870 Arabidopsis lyrata HOM05D006801 ORTHO05D008490 1.2e-51 206.8 162 61.7
SGA_v2.0_scaffold85G26712 Striga asiatica HOM05D000053 ORTHO05D008490 2.0e-51 206.1 163 63.2
FAN09G2180 Fragaria x ananassa HOM05D006801 ORTHO05D008490 4.5e-51 204.9 143 65.0
AT5G01300 Arabidopsis thaliana HOM05D006801 ORTHO05D008490 1.0e-50 203.8 162 60.5
EL10Ac5g12521 Beta vulgaris HOM05D006801 ORTHO05D008490 1.0e-50 203.8 167 60.5
unitig_26.g9083 Utricularia gibba HOM05D006801 ORTHO05D008490 1.7e-50 203.0 161 63.4
Lalb_Chr07g0191271 Lupinus albus HOM05D006801 ORTHO05D008490 2.5e-49 199.1 147 65.3
Zm00001eb351790 Zea mays HOM05D006801 ORTHO05D008490 5.5e-49 198.0 171 59.6
Ah.12g058900 Amaranthus hybridus HOM05D006801 ORTHO05D008490 7.9e-48 194.1 167 60.5
Medtr4g017680 Medicago truncatula HOM05D006801 ORTHO05D008490 1.5e-46 189.9 169 58.6
A10p33680 Brassica napus HOM05D005640 ORTHO05D007124 5.7e-46 188.0 141 62.4
MBI15_g30116_MAGBIO Magnolia biondii HOM05D006801 ORTHO05D008490 1.7e-45 186.4 142 64.1
HPP92_026978 Vanilla planifolia HOM05D006801 ORTHO05D008490 3.7e-45 185.3 167 54.5
C09p74590 Brassica napus HOM05D005640 ORTHO05D007124 1.4e-44 183.3 141 61.7
SEGI_01937 Sequoiadendron giganteum HOM05D006801 ORTHO05D008490 3.1e-44 182.2 162 53.1
HPP92_015418 Vanilla planifolia HOM05D006801 ORTHO05D008490 4.1e-44 181.8 167 53.3
Sed0001867 Sechium edule HOM05D006801 ORTHO05D008490 6.9e-44 181.0 166 57.2
Dinv18520 Davidia involucrata HOM05D006801 ORTHO05D008490 4.5e-43 178.3 113 76.1
Thhalv10014869m.g Eutrema salsugineum HOM05D006801 ORTHO05D008490 1.4e-41 173.3 163 55.2
Lalb_Chr12g0207091 Lupinus albus HOM05D006801 ORTHO05D008490 3.2e-41 172.2 169 53.3
VMungo0331G1841 Vigna mungo HOM05D006801 ORTHO05D008490 3.2e-41 172.2 169 55.6
Lj3g0026162 Lotus japonicus HOM05D006801 ORTHO05D008490 1.6e-40 169.9 172 54.7
Mapoly0003s0041 Marchantia polymorpha HOM05D006801 ORTHO05D008490 8.8e-39 164.1 163 48.5
Gohir.D01G218200 Gossypium hirsutum HOM05D006801 ORTHO05D008490 2.0e-38 162.9 113 66.4
Nitab4.5_0000539g0120 Nicotiana tabacum HOM05D006801 ORTHO05D008490 2.0e-38 162.9 123 65.9
arahy.Tifrunner.gnm1.ann1.M4T34S Arachis hypogaea HOM05D006801 ORTHO05D008490 4.1e-36 155.2 175 50.9
CDE08G0176 Ceratophyllum demersum HOM05D006801 ORTHO05D008490 9.1e-36 154.1 144 57.6
SMO347G0428 Selaginella moellendorffii HOM05D006801 ORTHO05D008490 3.5e-35 152.1 166 48.2
CBR_g39562 Chara braunii HOM05D006801 ORTHO05D008490 1.9e-33 146.4 167 44.3
Pp3c1_41520 Physcomitrium patens HOM05D006801 ORTHO05D008490 1.2e-32 143.7 161 46.0
Ca_20197_v3 Cicer arietinum L. HOM05D006801 ORTHO05D008490 1.5e-30 136.7 157 48.4
ATR0681G271 Amborella trichopoda HOM05D006801 ORTHO05D008490 1.7e-29 133.3 90 72.2
AagrBONN_evm.TU.Sc2ySwM_228.3494 Anthoceros agrestis HOM05D006801 ORTHO05D008490 6.3e-29 131.3 149 47.7
PGSC0003DMG400006267 Solanum tuberosum HOM05D006801 ORTHO05D008490 1.1e-28 130.6 87 75.9
Pp3c21_8040 Physcomitrium patens HOM05D006801 ORTHO05D008490 4.1e-28 128.6 149 45.6
Hma1.2p1_0501F.1_g167640 Hydrangea macrophylla HOM05D006801 ORTHO05D008490 1.0e-26 124.0 110 57.3
Prupe.1G005200 Prunus persica HOM05D006801 ORTHO05D008490 7.5e-22 107.8 141 44.0
arahy.Tifrunner.gnm1.ann1.1WC97K Arachis hypogaea HOM05D006801 ORTHO05D008490 1.7e-21 106.7 131 48.9
FAN05G3081 Fragaria x ananassa HOM05D000734 ORTHO05D002223 2.2e-13 79.7 44 77.3
ATR0681G235 Amborella trichopoda HOM05D006801 ORTHO05D008490 2.7e-11 72.8 51 64.7
Actinidia20750 Actinidia chinensis HOM05D006801 ORTHO05D008490 3.6e-08 62.4 108 37.0


User provided reference genes

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