Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0028198 Camellia sinensis var. sinensis HOM05D005044 ORTHO05D020187 6.9e-37 156.8 77 100.0
CSS0023052 Camellia sinensis var. sinensis HOM05D005044 ORTHO05D020187 1.5e-23 112.5 77 75.3
CSS0043243 Camellia sinensis var. sinensis HOM05D005044 ORTHO05D006799 4.1e-13 77.8 77 58.4
Nitab4.5_0000393g0090 Nicotiana tabacum HOM05D005044 ORTHO05D020187 1.3e-11 72.8 84 48.8
Dinv34561 Davidia involucrata HOM05D005044 ORTHO05D006799 6.5e-11 70.5 77 51.9
Dinv22487 Davidia involucrata HOM05D005044 ORTHO05D006799 8.5e-11 70.1 77 51.9
DCAR_018443 Daucus carota HOM05D005044 ORTHO05D006799 1.9e-10 68.9 77 51.9
TAR365G0173 Trochodendron aralioides HOM05D005044 ORTHO05D006799 2.5e-10 68.6 77 53.2
CiPaw.04G181200 Carya illinoinensis HOM05D005044 ORTHO05D006799 2.1e-09 65.5 77 50.6
Gorai.007G141400 Gossypium raimondii HOM05D005044 ORTHO05D006799 2.7e-09 65.1 75 50.7
TWI75G1122 Tripterygium wilfordii HOM05D005044 ORTHO05D006799 2.7e-09 65.1 77 48.1
Duzib133G0403 Durio zibethinus HOM05D005044 ORTHO05D006799 3.6e-09 64.7 75 50.7
Migut.N02179 Erythranthe guttata HOM05D005044 ORTHO05D006799 4.6e-09 64.3 75 48.0
FAN15G1010 Fragaria x ananassa HOM05D005044 ORTHO05D006799 4.6e-09 64.3 75 48.0
VMungo1383G1961 Vigna mungo HOM05D005044 ORTHO05D006799 4.6e-09 64.3 75 49.3
SGA_v2.0_scaffold80G25918 Striga asiatica HOM05D005044 ORTHO05D006799 6.1e-09 63.9 75 48.0
Gohir.A11G127000 Gossypium hirsutum HOM05D005044 ORTHO05D006799 1.0e-08 63.2 75 49.3
Manes.05G083800 Manihot esculenta HOM05D005044 ORTHO05D006799 1.0e-08 63.2 77 49.4
RcHm_v2.0_Chr6g0289651 Rosa chinensis HOM05D005044 ORTHO05D006799 1.0e-08 63.2 75 48.0
Solyc10g045390.2 Solanum lycopersicum HOM05D005044 ORTHO05D006799 1.0e-08 63.2 75 46.7
Sopen10g015430 Solanum pennellii HOM05D005044 ORTHO05D006799 1.0e-08 63.2 75 46.7
Peaxi162Scf01826g00011 Petunia axillaris HOM05D005044 ORTHO05D020187 1.4e-08 62.8 75 50.7
Phvul.001G156000 Phaseolus vulgaris HOM05D005044 ORTHO05D006799 1.8e-08 62.4 75 48.0
unitig_22.g5954 Utricularia gibba HOM05D005044 ORTHO05D006799 1.8e-08 62.4 75 49.3
Ciclev10019527m.g Citrus clementina HOM05D005044 ORTHO05D006799 2.3e-08 62.0 77 48.1
Lalb_Chr01g0019911 Lupinus albus HOM05D005044 ORTHO05D006799 2.3e-08 62.0 75 48.0
Cpa.g.sc52.102 Carica papaya HOM05D005044 ORTHO05D006799 3.9e-08 61.2 77 48.1
Glyma.03G158300 Glycine max HOM05D005044 ORTHO05D006799 3.9e-08 61.2 75 46.7
Glyma.19G160700 Glycine max HOM05D005044 ORTHO05D006799 3.9e-08 61.2 75 46.7
Lj1g0021498 Lotus japonicus HOM05D005044 ORTHO05D006799 3.9e-08 61.2 75 48.0
Lalb_Chr25g0290121 Lupinus albus HOM05D005044 ORTHO05D006799 3.9e-08 61.2 75 48.0
Nitab4.5_0004093g0020 Nicotiana tabacum HOM05D005044 ORTHO05D020187 3.9e-08 61.2 70 51.4
Oeu018178.1 Olea europaea HOM05D005044 ORTHO05D006799 3.9e-08 61.2 75 46.7
QL12p042617 Quercus lobata HOM05D005044 ORTHO05D006799 3.9e-08 61.2 75 49.3
Atru.chr5.1554 Acer truncatum HOM05D005044 ORTHO05D006799 5.1e-08 60.8 75 48.0
Prupe.8G232900 Prunus persica HOM05D005044 ORTHO05D006799 5.1e-08 60.8 77 48.1
TWI12G0479 Tripterygium wilfordii HOM05D005044 ORTHO05D006799 5.1e-08 60.8 77 46.8
AL5G35690 Arabidopsis lyrata HOM05D005044 ORTHO05D006799 6.7e-08 60.5 75 45.3
AT3G54610 Arabidopsis thaliana HOM05D005044 ORTHO05D006799 6.7e-08 60.5 75 45.3
Carub.0005s2121 Capsella rubella HOM05D005044 ORTHO05D006799 6.7e-08 60.5 75 45.3
Lj1A57T46 Lonicera japonica HOM05D005044 ORTHO05D006799 8.8e-08 60.1 77 50.6
PGR044G0510 Punica granatum HOM05D005044 ORTHO05D006799 1.5e-07 59.3 76 48.7
FAN24G0661 Fragaria x ananassa HOM05D005044 ORTHO05D006799 2.0e-07 58.9 75 45.3
Hund09563 Selenicereus undatus HOM05D005044 ORTHO05D006799 2.6e-07 58.5 75 45.3
TPR.G19106 Trifolium pratense HOM05D005044 ORTHO05D006799 2.6e-07 58.5 75 48.0
BcaB01g00175 Brassica carinata HOM05D005044 ORTHO05D006799 3.3e-07 58.2 75 44.0
BcaB02g08448 Brassica carinata HOM05D005044 ORTHO05D006799 3.3e-07 58.2 75 44.0
BcaC02g09057 Brassica carinata HOM05D005044 ORTHO05D006799 3.3e-07 58.2 75 44.0
A04p05210 Brassica napus HOM05D005044 ORTHO05D006799 3.3e-07 58.2 75 44.0
C04p37940 Brassica napus HOM05D005044 ORTHO05D006799 3.3e-07 58.2 75 44.0
BolC4t25370H Brassica oleracea HOM05D005044 ORTHO05D006799 3.3e-07 58.2 75 44.0
BraA04t16230Z Brassica rapa HOM05D005044 ORTHO05D006799 3.3e-07 58.2 75 44.0
MELO3C007015.2 Cucumis melo HOM05D005044 ORTHO05D006799 3.3e-07 58.2 75 45.3
CsaV3_6G052930 Cucumis sativus L. HOM05D005044 ORTHO05D006799 3.3e-07 58.2 75 45.3
Sp5g07850 Schrenkiella parvula HOM05D005044 ORTHO05D006799 3.3e-07 58.2 75 44.0
ClCG01G025700 Citrullus lanatus HOM05D005044 ORTHO05D006799 4.4e-07 57.8 75 45.3
Medtr7g096040 Medicago truncatula HOM05D005044 ORTHO05D006799 4.4e-07 57.8 75 46.7
Eucgr.K03316 Eucalyptus grandis HOM05D005044 ORTHO05D006799 5.7e-07 57.4 78 46.2
Thecc.01G268500 Theobroma cacao HOM05D005044 ORTHO05D006799 5.7e-07 57.4 75 44.0
HanXRQChr10g0281481 Helianthus annuus HOM05D005044 ORTHO05D006799 9.7e-07 56.6 77 42.9
BcaC02g09052 Brassica carinata HOM05D005044 ORTHO05D006799 1.3e-06 56.2 75 40.0
BraA04t16227Z Brassica rapa HOM05D005044 ORTHO05D006799 1.3e-06 56.2 75 40.0
C04p37870 Brassica napus HOM05D005044 ORTHO05D006799 1.7e-06 55.8 75 40.0
BolC4t25361H Brassica oleracea HOM05D005044 ORTHO05D006799 1.7e-06 55.8 75 40.0
MD10G1193500 Malus domestica HOM05D005044 ORTHO05D006799 2.2e-06 55.5 76 46.1
Lsat_1_v5_gn_9_8160 Lactuca sativa HOM05D005044 ORTHO05D006799 2.8e-06 55.1 77 42.9
Sc05g0001060 Simmondsia chinensis HOM05D005044 ORTHO05D006799 3.7e-06 54.7 77 45.5
GSVIVG01000712001 Vitis vinifera HOM05D005044 ORTHO05D006799 3.7e-06 54.7 77 42.9
HPP92_026599 Vanilla planifolia HOM05D005044 ORTHO05D006799 4.8e-06 54.3 25 96.0
Aqoxy2G03504 Aquilegia oxysepala HOM05D005044 ORTHO05D006799 6.3e-06 53.9 77 46.8
Potri.002G045900 Populus trichocarpa HOM05D005044 ORTHO05D006799 6.3e-06 53.9 70 44.3
SEGI_32822 Sequoiadendron giganteum HOM05D005044 ORTHO05D006799 6.3e-06 53.9 25 92.0
Eucgr.K03317 Eucalyptus grandis HOM05D005044 ORTHO05D006799 8.2e-06 53.5 78 43.6
Psat3g061080 Pisum sativum HOM05D005044 ORTHO05D006799 8.2e-06 53.5 25 92.0


User provided reference genes

Program Settings