Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0028178 Camellia sinensis var. sinensis HOM05D002451 ORTHO05D005601 3.6e-59 231.5 125 100.0
CSS0026050 Camellia sinensis var. sinensis HOM05D002451 ORTHO05D005601 1.8e-58 229.2 125 99.2
Actinidia32098 Actinidia chinensis HOM05D002451 ORTHO05D005601 4.2e-36 154.8 96 87.5
Dinv37977 Davidia involucrata HOM05D002451 ORTHO05D005601 2.1e-35 152.5 96 85.4
vmacro18852 Vaccinium macrocarpon HOM05D002451 ORTHO05D005601 9.8e-33 143.7 96 81.2
Lj9C513G3 Lonicera japonica HOM05D002451 ORTHO05D005601 1.0e-29 133.7 96 76.0
Manes.11G033500 Manihot esculenta HOM05D002451 ORTHO05D005601 1.7e-29 132.9 96 71.9
MSTRG.11027 Avicennia marina HOM05D002451 ORTHO05D005601 2.9e-29 132.1 96 72.9
CANSAT56G2471 Cannabis sativa HOM05D002451 ORTHO05D005601 2.9e-29 132.1 97 72.2
Migut.I00897 Erythranthe guttata HOM05D002451 ORTHO05D005601 3.8e-29 131.7 96 69.8
COL.COLO4_30513 Corchorus olitorius HOM05D002451 ORTHO05D005601 6.6e-29 131.0 96 69.8
Cc04_g02550 Coffea canephora HOM05D002451 ORTHO05D005601 1.1e-28 130.2 96 71.9
Atru.chr1.3524 Acer truncatum HOM05D002451 ORTHO05D005601 1.9e-28 129.4 97 70.1
Duzib192G0210 Durio zibethinus HOM05D002451 ORTHO05D005601 1.9e-28 129.4 96 71.9
MD09G1202800 Malus domestica HOM05D002451 ORTHO05D005601 2.5e-28 129.0 96 70.8
Gohir.A06G189400 Gossypium hirsutum HOM05D002451 ORTHO05D005601 5.6e-28 127.9 96 71.9
Prupe.3G059000 Prunus persica HOM05D002451 ORTHO05D005601 3.6e-27 125.2 96 66.7
Lsat_1_v5_gn_4_97440 Lactuca sativa HOM05D002451 ORTHO05D005601 8.0e-27 124.0 100 70.0
TAR636G2911 Trochodendron aralioides HOM05D002451 ORTHO05D005601 8.0e-27 124.0 106 63.2
Ca_01165_v3 Cicer arietinum L. HOM05D002451 ORTHO05D005601 1.0e-26 123.6 96 65.6
Nitab4.5_0006902g0020 Nicotiana tabacum HOM05D002451 ORTHO05D005601 1.0e-26 123.6 89 74.2
CiPaw.01G231400 Carya illinoinensis HOM05D002451 ORTHO05D005601 1.4e-26 123.2 118 58.5
Gorai.010G230600 Gossypium raimondii HOM05D002451 ORTHO05D005601 1.8e-26 122.9 96 69.8
HanXRQChr09g0276251 Helianthus annuus HOM05D002451 ORTHO05D005601 1.8e-26 122.9 100 70.0
EL10Ac9g21204 Beta vulgaris HOM05D002451 ORTHO05D005601 3.0e-26 122.1 96 65.6
Ciclev10024743m.g Citrus clementina HOM05D002451 ORTHO05D005601 3.0e-26 122.1 96 65.6
Nitab4.5_0006467g0020 Nicotiana tabacum HOM05D002451 ORTHO05D005601 3.0e-26 122.1 89 73.0
QL05p020031 Quercus lobata HOM05D002451 ORTHO05D005601 3.0e-26 122.1 97 67.0
Glyma.15G019600 Glycine max HOM05D002451 ORTHO05D005601 5.2e-26 121.3 96 61.5
Sopen03g039860 Solanum pennellii HOM05D002451 ORTHO05D005601 5.2e-26 121.3 91 72.5
Thecc.06G100100 Theobroma cacao HOM05D002451 ORTHO05D005601 6.8e-26 120.9 96 67.7
FvH4_6g32400 Fragaria vesca HOM05D002451 ORTHO05D005601 8.9e-26 120.6 96 64.6
FAN05G4332 Fragaria x ananassa HOM05D002451 ORTHO05D005601 8.9e-26 120.6 96 64.6
FAN14G4820 Fragaria x ananassa HOM05D002451 ORTHO05D005601 8.9e-26 120.6 96 64.6
GSVIVG01016980001 Vitis vinifera HOM05D002451 ORTHO05D005601 8.9e-26 120.6 96 68.8
FAN02G1073 Fragaria x ananassa HOM05D002451 ORTHO05D005601 1.2e-25 120.2 96 64.6
Solyc03g121030.2 Solanum lycopersicum HOM05D002451 ORTHO05D005601 1.2e-25 120.2 91 71.4
TPR.G6596 Trifolium pratense HOM05D002451 ORTHO05D005601 1.2e-25 120.2 97 62.9
Cpa.g.sc25.3 Carica papaya HOM05D002451 ORTHO05D005601 1.5e-25 119.8 96 63.5
Nn8g39071 Nelumbo nucifera HOM05D002451 ORTHO05D005601 1.5e-25 119.8 101 62.4
TWI12G0408 Tripterygium wilfordii HOM05D002451 ORTHO05D005601 1.5e-25 119.8 96 66.7
ClCG09G000220 Citrullus lanatus HOM05D002451 ORTHO05D005601 2.6e-25 119.0 96 68.8
Gohir.D06G197800 Gossypium hirsutum HOM05D002451 ORTHO05D005601 2.6e-25 119.0 96 68.8
CsaV3_7G035270 Cucumis sativus L. HOM05D002451 ORTHO05D005601 4.4e-25 118.2 96 66.7
Phvul.005G166100 Phaseolus vulgaris HOM05D002451 ORTHO05D005601 4.4e-25 118.2 97 66.0
Sc10g0007590 Simmondsia chinensis HOM05D002451 ORTHO05D005601 4.4e-25 118.2 96 65.6
Potri.003G048800 Populus trichocarpa HOM05D002451 ORTHO05D005601 5.8e-25 117.9 96 65.6
RcHm_v2.0_Chr2g0140541 Rosa chinensis HOM05D002451 ORTHO05D005601 5.8e-25 117.9 96 62.5
TAR624G0431 Trochodendron aralioides HOM05D002451 ORTHO05D005601 5.8e-25 117.9 101 60.4
unitig_88.g27601 Utricularia gibba HOM05D002451 ORTHO05D005601 9.8e-25 117.1 96 67.7
Medtr2g100870 Medicago truncatula HOM05D002451 ORTHO05D005601 1.3e-24 116.7 96 63.5
Glyma.13G354600 Glycine max HOM05D002451 ORTHO05D005601 2.2e-24 115.9 96 61.5
PGR102G3176 Punica granatum HOM05D002451 ORTHO05D005601 2.2e-24 115.9 96 62.5
Rhsim08G0227600 Rhododendron simsii HOM05D002451 ORTHO05D005601 2.2e-24 115.9 153 51.0
Sabra03G0029300 Salix brachista HOM05D002451 ORTHO05D005601 2.9e-24 115.5 96 64.6
Sed0021872 Sechium edule HOM05D002451 ORTHO05D005601 4.9e-24 114.8 96 65.6
Lj1g0009957 Lotus japonicus HOM05D002451 ORTHO05D005601 6.4e-24 114.4 96 61.5
arahy.Tifrunner.gnm1.ann1.65X03I Arachis hypogaea HOM05D002451 ORTHO05D005601 1.9e-23 112.8 96 59.4
arahy.Tifrunner.gnm1.ann1.T566S8 Arachis hypogaea HOM05D002451 ORTHO05D005601 1.9e-23 112.8 96 59.4
AUR62031915 Chenopodium quinoa HOM05D002451 ORTHO05D005601 1.9e-23 112.8 96 60.4
PSO063G3373 Papaver somniferum HOM05D002451 ORTHO05D005601 1.9e-23 112.8 98 60.2
Lalb_Chr14g0373021 Lupinus albus HOM05D002451 ORTHO05D005601 4.1e-23 111.7 96 60.4
Aqoxy7G01406 Aquilegia oxysepala HOM05D002451 ORTHO05D005601 5.4e-23 111.3 107 57.9
Cfa003647 Carpinus fangiana HOM05D002451 ORTHO05D005601 1.2e-22 110.2 96 61.5
CDE05G2530 Ceratophyllum demersum HOM05D002451 ORTHO05D005601 2.0e-22 109.4 96 61.5
PSO832G2466 Papaver somniferum HOM05D002451 ORTHO05D005601 2.0e-22 109.4 98 59.2
ECA232G2699 Erigeron canadensis HOM05D002451 ORTHO05D005601 6.0e-22 107.8 98 63.3
Medtr5g085950 Medicago truncatula HOM05D002451 ORTHO05D005601 1.3e-21 106.7 113 50.4
THA.LOC104809828 Tarenaya hassleriana HOM05D002451 ORTHO05D005601 1.7e-21 106.3 96 55.2
Sp2g18530 Schrenkiella parvula HOM05D002451 ORTHO05D005601 3.0e-21 105.5 96 56.2
TWI75G1452 Tripterygium wilfordii HOM05D002451 ORTHO05D005601 3.9e-21 105.1 96 58.3
ATR0705G185 Amborella trichopoda HOM05D002451 ORTHO05D005601 5.0e-21 104.8 101 56.4
AT5G48120 Arabidopsis thaliana HOM05D002451 ORTHO05D005601 6.6e-21 104.4 96 55.2
MBI04_g20307_MAGBIO Magnolia biondii HOM05D002451 ORTHO05D005601 6.6e-21 104.4 78 71.8
AL8G20730 Arabidopsis lyrata HOM05D002451 ORTHO05D005601 1.1e-20 103.6 96 54.2
Aa31LG11G5160 Aethionema arabicum HOM05D002451 ORTHO05D005601 1.5e-20 103.2 96 56.2
Oeu017119.1 Olea europaea HOM05D002451 ORTHO05D005601 1.9e-20 102.8 72 77.8
Thhalv10003552m.g Eutrema salsugineum HOM05D002451 ORTHO05D005601 2.1e-19 99.4 93 53.8
FAN09G4229 Fragaria x ananassa HOM05D002451 ORTHO05D005601 2.1e-19 99.4 81 65.4
QL05p020001 Quercus lobata HOM05D002451 ORTHO05D005601 2.1e-19 99.4 124 49.2
BcaB07g30001 Brassica carinata HOM05D002451 ORTHO05D005601 2.8e-19 99.0 101 52.5
Aa31LG9G10330 Aethionema arabicum HOM05D002451 ORTHO05D005601 4.7e-19 98.2 96 53.1
CARHR259290 Cardamine hirsuta HOM05D002451 ORTHO05D005601 4.7e-19 98.2 96 52.1
A02p37220 Brassica napus HOM05D002451 ORTHO05D005601 1.8e-18 96.3 101 50.5
BcaC03g17628 Brassica carinata HOM05D002451 ORTHO05D005601 2.3e-18 95.9 101 50.5
Carub.0008s0769 Capsella rubella HOM05D002451 ORTHO05D005601 5.2e-18 94.7 90 53.3
HPP92_007690 Vanilla planifolia HOM05D002451 ORTHO05D005601 5.2e-18 94.7 96 51.0
BraA02t08709Z Brassica rapa HOM05D002451 ORTHO05D005601 6.8e-18 94.4 101 49.5
DCAR_023080 Daucus carota HOM05D002451 ORTHO05D005601 3.4e-17 92.0 63 76.2
C02p56250 Brassica napus HOM05D002451 ORTHO05D005601 4.4e-17 91.7 102 51.0
BolC2t11683H Brassica oleracea HOM05D002451 ORTHO05D005601 5.8e-17 91.3 102 50.0
Ah.01g022090 Amaranthus hybridus HOM05D002451 ORTHO05D005601 4.9e-16 88.2 96 56.2
AUR62022206 Chenopodium quinoa HOM05D002451 ORTHO05D005601 4.9e-16 88.2 71 62.0
Os07g0177100 Oryza sativa ssp. japonica HOM05D002451 ORTHO05D005601 8.3e-16 87.4 89 52.8
Zm00001eb301230 Zea mays HOM05D002451 ORTHO05D005601 7.8e-14 80.9 89 50.6
Hund28869 Selenicereus undatus HOM05D002451 ORTHO05D005601 1.0e-13 80.5 64 65.6
SEGI_26537 Sequoiadendron giganteum HOM05D002451 ORTHO05D005601 1.0e-13 80.5 72 58.3
Hund28828 Selenicereus undatus HOM05D002451 ORTHO05D005601 2.3e-13 79.3 68 63.2
Mapoly0036s0119 Marchantia polymorpha HOM05D002451 ORTHO05D005601 3.9e-13 78.6 96 49.0
SGA_v2.0_scaffold66G22528 Striga asiatica HOM05D002451 ORTHO05D005601 9.5e-12 73.9 89 48.3
MELO3C024437.2 Cucumis melo HOM05D002451 ORTHO05D005601 4.0e-10 68.6 48 75.0
Haze_15848 Corylus avellana HOM05D002451 ORTHO05D005601 6.8e-10 67.8 96 46.9
Pp3c9_4950 Physcomitrium patens HOM05D002451 ORTHO05D005601 2.0e-09 66.2 100 40.0
A06p15140 Brassica napus HOM05D002451 ORTHO05D020166 1.3e-08 63.5 62 51.6
BraA06t24629Z Brassica rapa HOM05D002451 ORTHO05D020166 1.3e-08 63.5 62 51.6
Eucgr.F03079 Eucalyptus grandis HOM05D002451 ORTHO05D005601 3.2e-07 58.9 48 62.5


User provided reference genes

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