Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0028177 Camellia sinensis var. sinensis HOM05D007016 ORTHO05D008847 9.3e-110 400.2 201 100.0
Actinidia22202 Actinidia chinensis HOM05D007016 ORTHO05D008847 2.6e-59 232.6 259 56.8
Dinv12013 Davidia involucrata HOM05D007016 ORTHO05D008847 7.8e-56 221.1 250 53.6
Dinv34693 Davidia involucrata HOM05D007016 ORTHO05D008847 1.7e-55 219.9 250 53.2
vmacro11507 Vaccinium macrocarpon HOM05D007016 ORTHO05D008847 1.0e-52 210.7 259 53.3
Rhsim02G0251600 Rhododendron simsii HOM05D007016 ORTHO05D008847 2.0e-51 206.5 251 51.4
GSVIVG01019642001 Vitis vinifera HOM05D007016 ORTHO05D008847 3.9e-47 192.2 253 48.2
MD14G1125100 Malus domestica HOM05D007016 ORTHO05D008847 2.4e-41 172.9 238 45.0
TAR375G0929 Trochodendron aralioides HOM05D007016 ORTHO05D008847 2.5e-38 162.9 250 44.4
Cfa011932 Carpinus fangiana HOM05D007016 ORTHO05D008847 3.3e-38 162.5 235 46.4
FAN08G2008 Fragaria x ananassa HOM05D007016 ORTHO05D008847 7.3e-38 161.4 236 44.1
MBI04_g33411_MAGBIO Magnolia biondii HOM05D007016 ORTHO05D008847 1.6e-37 160.2 249 39.8
Haze_14080 Corylus avellana HOM05D007016 ORTHO05D008847 3.6e-37 159.1 235 44.7
Lsat_1_v5_gn_3_13941 Lactuca sativa HOM05D007016 ORTHO05D008847 3.6e-37 159.1 253 41.9
FAN04G1313 Fragaria x ananassa HOM05D007016 ORTHO05D008847 1.1e-36 157.5 236 43.6
Oeu022037.1 Olea europaea HOM05D007016 ORTHO05D008847 1.4e-36 157.1 252 42.1
RcHm_v2.0_Chr7g0186811 Rosa chinensis HOM05D007016 ORTHO05D008847 2.3e-36 156.4 258 40.3
Nitab4.5_0004251g0050 Nicotiana tabacum HOM05D007016 ORTHO05D008847 3.1e-36 156.0 254 42.9
Peaxi162Scf00074g00350 Petunia axillaris HOM05D000458 ORTHO05D000951 6.8e-36 154.8 247 42.9
Cc08_g16690 Coffea canephora HOM05D007016 ORTHO05D008847 1.2e-35 154.1 250 42.0
Prupe.5G128800 Prunus persica HOM05D007016 ORTHO05D008847 2.0e-35 153.3 241 44.0
QL02p028324 Quercus lobata HOM05D007016 ORTHO05D008847 7.5e-35 151.4 222 42.8
Sc01g0010620 Simmondsia chinensis HOM05D007016 ORTHO05D008847 2.9e-34 149.4 255 38.0
FvH4_5g11000 Fragaria vesca HOM05D007016 ORTHO05D008847 8.3e-34 147.9 236 42.4
CiPaw.12G078100 Carya illinoinensis HOM05D007016 ORTHO05D008847 1.4e-33 147.1 235 43.0
Eucgr.D01686 Eucalyptus grandis HOM05D007016 ORTHO05D008847 1.9e-33 146.7 251 37.8
PGR031G1249 Punica granatum HOM05D007016 ORTHO05D008847 7.1e-33 144.8 255 41.2
Thecc.03G221900 Theobroma cacao HOM05D007016 ORTHO05D008847 7.1e-33 144.8 252 38.9
Ciclev10021806m.g Citrus clementina HOM05D007016 ORTHO05D008847 9.2e-33 144.4 234 38.9
Nitab4.5_0007063g0030 Nicotiana tabacum HOM05D007016 ORTHO05D008847 2.1e-32 143.3 295 37.6
MD06G1117700 Malus domestica HOM05D007016 ORTHO05D008847 6.0e-32 141.7 206 42.7
Duzib205G1809 Durio zibethinus HOM05D007016 ORTHO05D008847 2.3e-31 139.8 235 40.4
Haze_09164 Corylus avellana HOM05D007016 ORTHO05D008847 5.1e-31 138.7 227 42.3
Duzib084G0025 Durio zibethinus HOM05D000458 ORTHO05D000951 6.6e-31 138.3 240 38.8
arahy.Tifrunner.gnm1.ann1.CXQL6Y Arachis hypogaea HOM05D007016 ORTHO05D008847 1.1e-30 137.5 223 39.5
arahy.Tifrunner.gnm1.ann1.6JL1AX Arachis hypogaea HOM05D007016 ORTHO05D008847 1.5e-30 137.1 223 39.5
Haze_09158 Corylus avellana HOM05D007016 ORTHO05D008847 1.9e-30 136.7 227 42.3
Manes.02G003500 Manihot esculenta HOM05D007016 ORTHO05D008847 1.9e-30 136.7 239 39.7
Phvul.002G036800 Phaseolus vulgaris HOM05D007016 ORTHO05D008847 2.5e-30 136.3 221 38.9
ECA246G5308 Erigeron canadensis HOM05D007016 ORTHO05D008847 3.3e-30 136.0 216 38.4
Gohir.D03G085700 Gossypium hirsutum HOM05D007016 ORTHO05D008847 4.3e-30 135.6 251 37.1
Gorai.003G076500 Gossypium raimondii HOM05D007016 ORTHO05D008847 4.3e-30 135.6 251 37.1
Gohir.A02G097900 Gossypium hirsutum HOM05D007016 ORTHO05D008847 5.6e-30 135.2 246 37.8
AUR62019909 Chenopodium quinoa HOM05D007016 ORTHO05D008847 1.2e-29 134.0 239 39.7
FAN18G1330 Fragaria x ananassa HOM05D007016 ORTHO05D008847 2.1e-29 133.3 274 36.5
PSO339G2192 Papaver somniferum HOM05D007016 ORTHO05D008847 2.8e-29 132.9 255 40.0
TWI15G0571 Tripterygium wilfordii HOM05D007016 ORTHO05D008847 2.8e-29 132.9 248 37.1
TWI81G0911 Tripterygium wilfordii HOM05D007016 ORTHO05D008847 3.6e-29 132.5 259 37.8
Glyma.01G230300 Glycine max HOM05D007016 ORTHO05D008847 8.1e-29 131.3 255 40.4
Lsat_1_v5_gn_3_14061 Lactuca sativa HOM05D007016 ORTHO05D008847 8.1e-29 131.3 246 38.6
VMungo1215G3083 Vigna mungo HOM05D007016 ORTHO05D008847 8.1e-29 131.3 227 38.8
PSO339G4063 Papaver somniferum HOM05D007016 ORTHO05D008847 1.1e-28 131.0 255 40.4
MSTRG.15575 Avicennia marina HOM05D007016 ORTHO05D008847 1.4e-28 130.6 247 38.5
ClCG01G001570 Citrullus lanatus HOM05D007016 ORTHO05D008847 1.8e-28 130.2 252 38.1
Aqoxy5G04260 Aquilegia oxysepala HOM05D007016 ORTHO05D008847 2.4e-28 129.8 254 37.8
Nn3g18888 Nelumbo nucifera HOM05D007016 ORTHO05D008847 4.0e-28 129.0 300 35.7
Sabra03G0106200 Salix brachista HOM05D007016 ORTHO05D008847 1.2e-27 127.5 250 35.6
Migut.O00796 Erythranthe guttata HOM05D007016 ORTHO05D008847 1.5e-27 127.1 257 38.9
Potri.003G146100 Populus trichocarpa HOM05D007016 ORTHO05D008847 1.5e-27 127.1 252 37.3
AUR62007045 Chenopodium quinoa HOM05D007016 ORTHO05D008847 2.6e-27 126.3 218 38.5
COL.COLO4_10789 Corchorus olitorius HOM05D000458 ORTHO05D000951 4.4e-27 125.6 212 38.7
HanXRQChr06g0166831 Helianthus annuus HOM05D007016 ORTHO05D008847 4.4e-27 125.6 241 35.7
Atru.chr9.1899 Acer truncatum HOM05D007016 ORTHO05D008847 8.4e-26 121.3 209 37.3
CsaV3_5G001730 Cucumis sativus L. HOM05D007016 ORTHO05D008847 8.4e-26 121.3 253 37.5
DCAR_006538 Daucus carota HOM05D007016 ORTHO05D008847 4.2e-25 119.0 215 39.1
PGSC0003DMG400012122 Solanum tuberosum HOM05D007016 ORTHO05D008847 5.4e-25 118.6 256 36.3
Ca_24467_v3 Cicer arietinum L. HOM05D007016 ORTHO05D008847 2.1e-24 116.7 254 34.6
FAN13G1076 Fragaria x ananassa HOM05D007016 ORTHO05D008847 3.5e-24 115.9 228 37.7
EL10Ac5g12439 Beta vulgaris HOM05D007016 ORTHO05D008847 7.8e-24 114.8 241 35.3
LjContig00222g0018079 Lotus japonicus HOM05D007016 ORTHO05D008847 3.9e-23 112.5 198 38.9
Sopen08g031240 Solanum pennellii HOM05D007016 ORTHO05D008847 3.9e-23 112.5 255 35.7
Sed0027229 Sechium edule HOM05D007016 ORTHO05D008847 8.7e-23 111.3 268 32.5
Solyc08g083030.4 Solanum lycopersicum HOM05D007016 ORTHO05D008847 8.7e-23 111.3 256 35.5
ATR0620G109 Amborella trichopoda HOM05D007016 ORTHO05D008847 1.5e-22 110.5 243 35.0
Medtr5g008220 Medicago truncatula HOM05D007016 ORTHO05D008847 1.2e-21 107.5 258 34.1
SGA_v2.0_scaffold314G48366 Striga asiatica HOM05D007016 ORTHO05D008847 2.1e-21 106.7 216 36.1
Cpa.g.sc175.19 Carica papaya HOM05D007016 ORTHO05D008847 1.8e-20 103.6 187 37.4
Ah.07g197890 Amaranthus hybridus HOM05D007016 ORTHO05D008847 3.1e-20 102.8 221 34.4
CAN.G567.80 Capsicum annuum HOM05D007016 ORTHO05D008847 4.0e-20 102.4 239 36.4
HPP92_022341 Vanilla planifolia HOM05D007016 ORTHO05D008847 9.0e-20 101.3 228 34.2
MELO3C005780.2 Cucumis melo HOM05D007016 ORTHO05D008847 2.0e-19 100.1 228 33.8
unitig_62.g23644 Utricularia gibba HOM05D007016 ORTHO05D008847 3.4e-19 99.4 204 33.8
HPP92_022355 Vanilla planifolia HOM05D007016 ORTHO05D008847 4.4e-19 99.0 228 33.8
Lalb_Chr09g0320381 Lupinus albus HOM05D007016 ORTHO05D008847 2.9e-18 96.3 253 31.2
Thhalv10027936m.g Eutrema salsugineum HOM05D007016 ORTHO05D008847 6.4e-18 95.1 144 40.3
Potri.001G084600 Populus trichocarpa HOM05D007016 ORTHO05D008847 8.4e-18 94.7 159 38.4
CARHR212600 Cardamine hirsuta HOM05D007016 ORTHO05D008847 1.4e-17 94.0 116 50.9
A07p21030 Brassica napus HOM05D003273 ORTHO05D004023 1.9e-17 93.6 175 37.1
HanXRQChr17g0534751 Helianthus annuus HOM05D007016 ORTHO05D008847 1.2e-16 90.9 162 36.4
Aa31LG9G230 Aethionema arabicum HOM05D007016 ORTHO05D008847 2.1e-16 90.1 123 48.8
BraA07t29790Z Brassica rapa HOM05D003273 ORTHO05D004023 2.7e-16 89.7 148 38.5
Psat2g187480 Pisum sativum HOM05D007016 ORTHO05D008847 3.5e-16 89.4 65 64.6
arahy.Tifrunner.gnm1.ann1.PIY4C5 Arachis hypogaea HOM05D007016 ORTHO05D008847 6.0e-16 88.6 59 62.7
Carub.0007s3342 Capsella rubella HOM05D007016 ORTHO05D008847 7.8e-16 88.2 116 47.4
Nitab4.5_0000051g0070 Nicotiana tabacum HOM05D007016 ORTHO05D008847 7.8e-16 88.2 93 59.1
BcaC02g08900 Brassica carinata HOM05D003273 ORTHO05D004023 1.0e-15 87.8 63 61.9
A04p15110 Brassica napus HOM05D003273 ORTHO05D005100 1.3e-15 87.4 63 61.9
C04p49340 Brassica napus HOM05D003273 ORTHO05D005100 1.3e-15 87.4 63 61.9
BolC4t26521H Brassica oleracea HOM05D003273 ORTHO05D004023 1.3e-15 87.4 63 61.9
BraA04t17152Z Brassica rapa HOM05D003273 ORTHO05D005100 1.3e-15 87.4 63 61.9
BcaB06g27684 Brassica carinata HOM05D003273 ORTHO05D004023 2.3e-15 86.7 113 46.9
AL7G47260 Arabidopsis lyrata HOM05D007016 ORTHO05D008847 6.6e-15 85.1 122 48.4
AT5G41960 Arabidopsis thaliana HOM05D007016 ORTHO05D008847 6.6e-15 85.1 108 49.1
Os04g0585600 Oryza sativa ssp. japonica HOM05D007016 ORTHO05D008847 8.7e-15 84.7 77 51.9
Sp7g00170 Schrenkiella parvula HOM05D007016 ORTHO05D008847 1.1e-14 84.3 196 36.2
BcaC08g44572 Brassica carinata HOM05D003273 ORTHO05D004023 1.9e-14 83.6 90 52.2
CANSAT21G1603 Cannabis sativa HOM05D007016 ORTHO05D008847 2.1e-13 80.1 215 32.1
THA.LOC104809306 Tarenaya hassleriana HOM05D007016 ORTHO05D008847 2.1e-13 80.1 203 33.0
C06p20380 Brassica napus HOM05D003273 ORTHO05D004023 3.6e-13 79.3 66 60.6
SEGI_36842 Sequoiadendron giganteum HOM05D007016 ORTHO05D008847 6.2e-13 78.6 211 29.4
Zm00001eb428160 Zea mays HOM05D007016 ORTHO05D008847 6.2e-13 78.6 205 30.7
TPR.G38026 Trifolium pratense HOM05D007016 ORTHO05D008847 1.1e-12 77.8 174 33.9
SEGI_07436 Sequoiadendron giganteum HOM05D007016 ORTHO05D008847 9.0e-12 74.7 58 58.6
Mapoly0080s0071 Marchantia polymorpha HOM05D007016 ORTHO05D008847 4.9e-10 68.9 64 50.0
Hund14199 Selenicereus undatus HOM05D007016 ORTHO05D008847 1.9e-09 67.0 75 45.3
MD16G1274000 Malus domestica HOM05D007016 ORTHO05D008847 4.2e-09 65.9 91 42.9
arahy.Tifrunner.gnm1.ann1.HM96ZH Arachis hypogaea HOM05D007016 ORTHO05D008847 7.1e-09 65.1 117 38.5
Pp3c14_22240 Physcomitrium patens HOM05D007016 ORTHO05D008847 1.6e-08 63.9 63 47.6
AagrBONN_evm.TU.Sc2ySwM_117.1459 Anthoceros agrestis HOM05D007016 ORTHO05D008847 3.5e-08 62.8 73 46.6
SMO164G0130 Selaginella moellendorffii HOM05D007016 ORTHO05D008847 7.9e-08 61.6 62 51.6
BolC6t37216H Brassica oleracea HOM05D007016 ORTHO05D008847 1.0e-07 61.2 145 32.4
Nitab4.5_0002582g0050 Nicotiana tabacum HOM05D007016 ORTHO05D008847 6.7e-07 58.5 46 65.2
CDE07G1000 Ceratophyllum demersum HOM05D007016 ORTHO05D008847 4.3e-06 55.8 90 34.4
PSO675G1839 Papaver somniferum HOM05D000047 ORTHO05D000044 4.3e-06 55.8 67 47.8
TAR622G0501 Trochodendron aralioides HOM05D007016 ORTHO05D008847 4.3e-06 55.8 47 59.6


User provided reference genes

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