Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0028152 Camellia sinensis var. sinensis HOM05D010463 ORTHO05D013260 7.6e-138 493.8 247 100.0
CSS0023034 Camellia sinensis var. sinensis HOM05D010463 ORTHO05D013260 2.9e-105 385.6 247 81.4
CSS0028650 Camellia sinensis var. sinensis HOM05D010463 ORTHO05D013260 5.7e-77 291.6 248 65.7
CSS0020709 Camellia sinensis var. sinensis HOM05D010463 ORTHO05D013260 2.5e-72 276.2 265 58.1
CSS0000863 Camellia sinensis var. sinensis HOM05D010463 ORTHO05D013260 3.3e-56 222.6 159 74.8
CSS0017908 Camellia sinensis var. sinensis HOM05D010463 ORTHO05D013260 2.3e-54 216.5 162 73.5
CSS0031901 Camellia sinensis var. sinensis HOM05D010463 ORTHO05D013260 2.2e-52 209.9 163 69.3
CSS0008375 Camellia sinensis var. sinensis HOM05D010463 ORTHO05D013260 5.4e-43 178.7 220 56.4
CSS0030045 Camellia sinensis var. sinensis HOM05D010463 ORTHO05D013260 5.4e-43 178.7 220 56.4
CSS0020839 Camellia sinensis var. sinensis HOM05D010463 ORTHO05D013260 1.3e-39 167.5 148 62.8
CSS0009355 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.1e-35 151.8 229 45.0
CSS0004988 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.3e-31 141.0 223 43.0
CSS0028520 Camellia sinensis var. sinensis HOM05D010463 ORTHO05D013260 1.6e-31 140.6 86 79.1
CSS0040722 Camellia sinensis var. sinensis HOM05D010463 ORTHO05D110166 5.5e-27 125.6 207 44.9
CSS0043805 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.1e-27 125.2 162 48.1
CSS0028511 Camellia sinensis var. sinensis HOM05D010463 ORTHO05D000001 1.0e-25 121.3 85 74.1
CSS0006020 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.1e-23 113.6 180 45.0
CSS0041521 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D017724 2.1e-23 113.6 173 44.5
CSS0010648 Camellia sinensis var. sinensis HOM05D010463 ORTHO05D110099 1.8e-22 110.5 206 43.7
Atru.chr8.482 Acer truncatum HOM05D000002 ORTHO05D000001 5.3e-22 109.0 247 35.6
Rhsim04G0123900 Rhododendron simsii HOM05D000182 ORTHO05D000112 7.6e-21 105.1 169 44.4
CSS0009795 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 6.5e-20 102.1 270 30.7
CSS0024820 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.1e-19 98.6 270 30.4
CSS0030269 Camellia sinensis var. sinensis HOM05D010463 ORTHO05D004772 1.6e-18 97.4 93 57.0
CSS0007783 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.0e-17 93.2 268 29.5
RhsimUnG0237200 Rhododendron simsii HOM05D000002 ORTHO05D013260 6.7e-17 92.0 108 50.9
Rhsim01G0085300 Rhododendron simsii HOM05D000002 ORTHO05D000047 5.7e-16 89.0 94 52.1
Rhsim02G0184000 Rhododendron simsii HOM05D010463 ORTHO05D017724 3.7e-15 86.3 131 45.0
CSS0017443 Camellia sinensis var. sinensis HOM05D010463 ORTHO05D013260 6.5e-12 75.5 96 49.0
TWI77G0936 Tripterygium wilfordii HOM05D010463 ORTHO05D013260 8.4e-12 75.1 82 50.0
TWI77G0837 Tripterygium wilfordii HOM05D000002 ORTHO05D013260 7.2e-11 72.0 82 51.2
Rhsim02G0139900 Rhododendron simsii HOM05D010463 ORTHO05D013260 1.1e-08 64.7 64 56.2
AUR62030950 Chenopodium quinoa HOM05D000002 ORTHO05D000001 5.7e-08 62.4 272 28.7
Sopen04g022060 Solanum pennellii HOM05D000002 ORTHO05D000001 7.4e-08 62.0 257 28.8
CSS0038422 Camellia sinensis var. sinensis HOM05D016258 ORTHO05D022108 1.1e-06 58.2 152 32.9


User provided reference genes

Program Settings