Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0028149 Camellia sinensis var. sinensis HOM05D006925 ORTHO05D008830 4.8e-166 587.8 304 100.0
CSS0004280 Camellia sinensis var. sinensis HOM05D006925 ORTHO05D008830 8.7e-160 567.0 304 97.4
Dinv30983 Davidia involucrata HOM05D006925 ORTHO05D008830 1.2e-132 476.9 303 81.5
Hma1.2p1_0157F.1_g069250 Hydrangea macrophylla HOM05D006925 ORTHO05D008830 3.9e-128 461.8 301 79.7
GSVIVG01023121001 Vitis vinifera HOM05D006925 ORTHO05D008830 1.2e-124 450.3 268 83.6
Cfa004416 Carpinus fangiana HOM05D006925 ORTHO05D008830 5.5e-122 441.4 263 82.5
CiPaw.05G000400 Carya illinoinensis HOM05D006925 ORTHO05D008830 7.2e-122 441.0 265 80.4
Cc02_g23820 Coffea canephora HOM05D006925 ORTHO05D008830 4.7e-121 438.3 291 77.7
MSTRG.16455 Avicennia marina HOM05D006925 ORTHO05D008830 8.0e-121 437.6 302 74.8
Sabra03G0019700 Salix brachista HOM05D006925 ORTHO05D000812 8.0e-121 437.6 286 76.9
DCAR_004828 Daucus carota HOM05D006925 ORTHO05D008830 8.8e-120 434.1 267 81.6
QL02p103778 Quercus lobata HOM05D006925 ORTHO05D008830 8.8e-120 434.1 281 76.5
CANSAT01G0563 Cannabis sativa HOM05D006925 ORTHO05D008830 1.2e-119 433.7 264 81.8
Potri.003G046600 Populus trichocarpa HOM05D006925 ORTHO05D008830 1.5e-119 433.3 286 77.6
Gorai.011G089700 Gossypium raimondii HOM05D006925 ORTHO05D008830 4.4e-119 431.8 278 77.7
Gohir.D10G082800 Gossypium hirsutum HOM05D006925 ORTHO05D008830 2.8e-118 429.1 278 77.3
Duzib160G0166 Durio zibethinus HOM05D006925 ORTHO05D008830 3.7e-118 428.7 268 79.5
Migut.B00701 Erythranthe guttata HOM05D006925 ORTHO05D008830 3.7e-118 428.7 280 77.9
TWI14G0460 Tripterygium wilfordii HOM05D006925 ORTHO05D008830 3.7e-118 428.7 270 78.9
Nitab4.5_0002274g0030 Nicotiana tabacum HOM05D006925 ORTHO05D008830 4.8e-118 428.3 302 72.2
Ah.02g128580 Amaranthus hybridus HOM05D006925 ORTHO05D008830 8.3e-118 427.6 268 79.1
THA.LOC104824095 Tarenaya hassleriana HOM05D006925 ORTHO05D008830 8.3e-118 427.6 250 81.6
unitig_8.g4519 Utricularia gibba HOM05D006925 ORTHO05D008830 1.1e-117 427.2 276 76.8
Actinidia00135 Actinidia chinensis HOM05D006925 ORTHO05D008830 7.0e-117 424.5 268 80.2
COL.COLO4_31098 Corchorus olitorius HOM05D006925 ORTHO05D008830 9.1e-117 424.1 267 79.8
Haze_09956 Corylus avellana HOM05D006925 ORTHO05D008830 9.1e-117 424.1 319 71.5
HanXRQChr03g0071141 Helianthus annuus HOM05D006925 ORTHO05D008830 3.5e-116 422.2 266 79.3
PGSC0003DMG400003436 Solanum tuberosum HOM05D006925 ORTHO05D008830 4.5e-116 421.8 298 71.8
Sopen10g013620 Solanum pennellii HOM05D006925 ORTHO05D008830 5.9e-116 421.4 302 70.9
ClCG10G007640 Citrullus lanatus HOM05D006925 ORTHO05D008830 1.7e-115 419.9 294 74.5
Solyc10g044840.2 Solanum lycopersicum HOM05D006925 ORTHO05D008830 1.7e-115 419.9 302 70.5
RcHm_v2.0_Chr7g0218321 Rosa chinensis HOM05D006925 ORTHO05D008830 2.9e-115 419.1 306 71.2
CAN.G402.4 Capsicum annuum HOM05D006925 ORTHO05D008830 3.8e-115 418.7 301 71.1
PGR042G2053 Punica granatum HOM05D006925 ORTHO05D008830 8.5e-115 417.5 261 78.5
ECA248G0237 Erigeron canadensis HOM05D002199 ORTHO05D007829 1.1e-114 417.2 253 81.0
MBI06_g17054_MAGBIO Magnolia biondii HOM05D006925 ORTHO05D008830 4.2e-114 415.2 270 75.9
Glyma.07G271000 Glycine max HOM05D006925 ORTHO05D008830 5.5e-114 414.8 256 79.7
Peaxi162Scf00055g00018 Petunia axillaris HOM05D006925 ORTHO05D008830 9.4e-114 414.1 283 74.6
CsaV3_3G006780 Cucumis sativus L. HOM05D006925 ORTHO05D008830 1.2e-113 413.7 246 81.7
Prupe.1G587400 Prunus persica HOM05D006925 ORTHO05D008830 1.2e-113 413.7 284 74.6
arahy.Tifrunner.gnm1.ann1.EDE5FN Arachis hypogaea HOM05D006925 ORTHO05D008830 4.7e-113 411.8 280 74.6
VMungo1215G1006 Vigna mungo HOM05D006925 ORTHO05D008830 8.0e-113 411.0 269 75.8
AL5G11640 Arabidopsis lyrata HOM05D006925 ORTHO05D008830 1.4e-112 410.2 294 72.1
BcaC06g31233 Brassica carinata HOM05D006925 ORTHO05D008830 3.0e-112 409.1 268 75.4
MD15G1445500 Malus domestica HOM05D006925 ORTHO05D008830 3.0e-112 409.1 289 73.0
arahy.Tifrunner.gnm1.ann1.MTF64G Arachis hypogaea HOM05D006925 ORTHO05D008830 8.8e-112 407.5 280 73.9
Lj4g0023352 Lotus japonicus HOM05D006925 ORTHO05D008830 8.8e-112 407.5 263 79.1
A06p43640 Brassica napus HOM05D006925 ORTHO05D008830 1.5e-111 406.8 273 75.5
BraA06t27246Z Brassica rapa HOM05D006925 ORTHO05D008830 1.5e-111 406.8 273 75.5
Sp2g13680 Schrenkiella parvula HOM05D006925 ORTHO05D008830 4.4e-111 405.2 304 69.4
BcaC06g34054 Brassica carinata HOM05D006925 ORTHO05D008830 1.7e-110 403.3 272 74.3
C07p33220 Brassica napus HOM05D006925 ORTHO05D008830 1.7e-110 403.3 272 74.3
BolC7t43833H Brassica oleracea HOM05D006925 ORTHO05D008830 1.7e-110 403.3 272 74.3
FAN18G1352 Fragaria x ananassa HOM05D006925 ORTHO05D008830 2.2e-110 402.9 246 80.1
Lsat_1_v5_gn_7_69720 Lactuca sativa HOM05D006925 ORTHO05D008830 2.2e-110 402.9 298 70.5
FvH4_5g27220 Fragaria vesca HOM05D006925 ORTHO05D008830 4.8e-110 401.7 246 79.7
FAN08G3037 Fragaria x ananassa HOM05D006925 ORTHO05D008830 8.3e-110 401.0 243 80.2
ATR1089G139 Amborella trichopoda HOM05D006925 ORTHO05D008830 4.1e-109 398.7 281 70.8
Lalb_Chr07g0176851 Lupinus albus HOM05D006925 ORTHO05D008830 5.4e-109 398.3 281 71.9
Aqoxy5G01835 Aquilegia oxysepala HOM05D006925 ORTHO05D008830 3.5e-108 395.6 288 71.2
CDE05G0936 Ceratophyllum demersum HOM05D006925 ORTHO05D008830 1.0e-107 394.0 277 72.6
PSO210G4845 Papaver somniferum HOM05D006925 ORTHO05D008830 1.0e-107 394.0 265 72.8
Nn5g27113 Nelumbo nucifera HOM05D006925 ORTHO05D008830 8.6e-107 391.0 276 73.2
Aa31LG2G7670 Aethionema arabicum HOM05D006925 ORTHO05D008830 2.8e-105 386.0 269 73.2
Gohir.A10G068400 Gossypium hirsutum HOM05D006925 ORTHO05D008830 2.3e-104 382.9 245 77.6
Medtr4g134410 Medicago truncatula HOM05D006925 ORTHO05D008830 3.7e-102 375.6 253 73.9
SGA_v2.0_scaffold254G45226 Striga asiatica HOM05D006925 ORTHO05D008830 1.8e-101 373.2 345 58.6
FAN13G1230 Fragaria x ananassa HOM05D006925 ORTHO05D008830 2.0e-100 369.8 264 71.6
Nitab4.5_0000288g0050 Nicotiana tabacum HOM05D006925 ORTHO05D008830 5.0e-99 365.2 302 64.2
Eucgr.G00053 Eucalyptus grandis HOM05D006925 ORTHO05D008830 2.5e-98 362.8 220 80.9
Sc03g0005610 Simmondsia chinensis HOM05D006925 ORTHO05D008830 2.5e-98 362.8 220 76.4
Carub.0005s0146 Capsella rubella HOM05D006925 ORTHO05D008830 4.3e-98 362.1 219 79.9
Thecc.06G062200 Theobroma cacao HOM05D006925 ORTHO05D008830 3.6e-97 359.0 235 74.9
Manes.06G015100 Manihot esculenta HOM05D006925 ORTHO05D008830 2.2e-94 349.7 242 73.1
Thhalv10004663m.g Eutrema salsugineum HOM05D006925 ORTHO05D008830 8.3e-94 347.8 225 75.1
HPP92_001204 Vanilla planifolia HOM05D006925 ORTHO05D008830 2.4e-93 346.3 243 70.0
Phvul.003G090400 Phaseolus vulgaris HOM05D006925 ORTHO05D008830 1.6e-92 343.6 218 77.1
Ca_13518_v3 Cicer arietinum L. HOM05D006925 ORTHO05D008830 6.0e-92 341.7 235 74.5
Psat4g001760 Pisum sativum HOM05D006925 ORTHO05D008830 7.8e-92 341.3 254 67.3
Lj5A307T31 Lonicera japonica HOM05D006925 ORTHO05D008830 1.8e-88 330.1 260 65.8
Sed0012673 Sechium edule HOM05D006925 ORTHO05D008830 2.3e-88 329.7 194 80.9
AUR62032491 Chenopodium quinoa HOM05D006925 ORTHO05D008830 4.9e-86 322.0 194 79.9
EL10Ac6g13952 Beta vulgaris HOM05D006925 ORTHO05D008830 1.0e-83 314.3 271 60.5
Hund15314 Selenicereus undatus HOM05D006925 ORTHO05D008830 1.4e-80 303.9 204 75.0
vmacro01630 Vaccinium macrocarpon HOM05D006925 ORTHO05D008830 2.6e-79 299.7 247 68.4
MELO3C016443.2 Cucumis melo HOM05D006925 ORTHO05D008830 4.9e-78 295.4 166 84.9
Mapoly0001s0380 Marchantia polymorpha HOM05D006925 ORTHO05D008830 8.3e-78 294.7 277 54.5
AUR62040119 Chenopodium quinoa HOM05D006925 ORTHO05D008830 1.9e-77 293.5 300 56.0
Pp3c15_4340 Physcomitrium patens HOM05D006925 ORTHO05D008830 2.4e-77 293.1 244 58.6
Pp3c9_8480 Physcomitrium patens HOM05D006925 ORTHO05D008830 2.7e-76 289.7 251 58.2
TAR628G1169 Trochodendron aralioides HOM05D006925 ORTHO05D008830 1.7e-75 287.0 178 78.7
TPR.G5931 Trifolium pratense HOM05D006925 ORTHO05D008830 8.6e-75 284.6 239 64.0
SMO358G0233 Selaginella moellendorffii HOM05D006925 ORTHO05D008830 1.1e-69 267.7 246 54.9
CARHR144990 Cardamine hirsuta HOM05D006925 ORTHO05D008830 3.5e-68 262.7 199 67.3
AagrBONN_evm.TU.Sc2ySwM_369.585 Anthoceros agrestis HOM05D006925 ORTHO05D008830 4.8e-65 252.3 223 57.4
AT2G02410 Arabidopsis thaliana HOM05D006925 ORTHO05D008830 8.1e-65 251.5 224 60.7
SEGI_06138 Sequoiadendron giganteum HOM05D006925 ORTHO05D008830 3.5e-60 236.1 265 50.9
Zm00001eb064090 Zea mays HOM05D006925 ORTHO05D008830 1.0e-59 234.6 180 61.7
Rhsim11G0114700 Rhododendron simsii HOM05D006925 ORTHO05D008830 9.9e-55 218.0 272 51.1
Sabra03G0019900 Salix brachista HOM05D006925 ORTHO05D008830 1.7e-54 217.2 158 70.3
Ciclev10003645m.g Citrus clementina HOM05D006925 ORTHO05D008830 1.9e-45 187.2 162 61.1
Glyma.17G002900 Glycine max HOM05D006925 ORTHO05D008830 9.3e-37 158.3 93 83.9
AL5G11650 Arabidopsis lyrata HOM05D006925 ORTHO05D008830 8.7e-35 151.8 92 81.5
Os03g0843200 Oryza sativa ssp. japonica HOM05D006925 ORTHO05D008830 2.1e-28 130.6 106 61.3
SMO201G0205 Selaginella moellendorffii HOM05D006925 ORTHO05D008830 2.0e-26 124.0 115 49.6
Oeu016658.1 Olea europaea HOM05D006925 ORTHO05D008830 2.2e-25 120.6 97 61.9
TAR628G1563 Trochodendron aralioides HOM05D006925 ORTHO05D008830 3.8e-22 109.8 57 89.5
CBR_g49407 Chara braunii HOM05D000019 ORTHO05D000002 5.0e-22 109.4 121 50.4
SEGI_30664 Sequoiadendron giganteum HOM05D006925 ORTHO05D008830 5.5e-21 105.9 134 47.8
Oeu016657.1 Olea europaea HOM05D006925 ORTHO05D008830 6.7e-19 99.0 60 85.0
SMO199G0001 Selaginella moellendorffii HOM05D006925 ORTHO05D008830 3.3e-18 96.7 101 48.5
PRCOL_00002508 Prasinoderma coloniale HOM05D006925 ORTHO05D008830 1.5e-13 81.3 164 32.9
EL10Ac6g13953 Beta vulgaris HOM05D006925 ORTHO05D008830 7.2e-13 79.0 52 76.9
Glyma.20G064100 Glycine max HOM05D006925 ORTHO05D008830 8.0e-12 75.5 41 78.0
CBR_g46374 Chara braunii HOM05D000019 ORTHO05D000353 1.3e-09 68.2 47 63.8
MCO01G431 Micromonas commoda HOM05D006925 ORTHO05D008830 1.3e-09 68.2 354 24.0
Ciclev10003790m.g Citrus clementina HOM05D006925 ORTHO05D008830 2.0e-07 60.8 37 83.8
vmacro01629 Vaccinium macrocarpon HOM05D006925 ORTHO05D008830 2.7e-07 60.5 55 58.2


User provided reference genes

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