Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0028138 Camellia sinensis var. sinensis HOM05D004296 ORTHO05D005045 1.5e-92 342.8 170 100.0
CSS0027171 Camellia sinensis var. sinensis HOM05D004296 ORTHO05D005045 2.8e-91 338.6 170 98.2
CSS0030285 Camellia sinensis var. sinensis HOM05D004296 ORTHO05D005045 6.3e-83 310.8 174 90.2
CSS0003782 Camellia sinensis var. sinensis HOM05D004296 ORTHO05D005045 4.7e-78 294.7 174 87.9
CSS0037206 Camellia sinensis var. sinensis HOM05D004296 ORTHO05D005045 3.6e-70 268.5 174 82.2
Actinidia02008 Actinidia chinensis HOM05D004296 ORTHO05D005045 4.2e-63 245.0 173 71.7
Dinv38945 Davidia involucrata HOM05D004296 ORTHO05D005045 1.4e-61 240.0 173 71.7
Rhsim02G0231000 Rhododendron simsii HOM05D004296 ORTHO05D005045 1.6e-57 226.5 179 65.4
Hma1.2p1_0896F.1_g234000 Hydrangea macrophylla HOM05D004296 ORTHO05D005045 5.9e-57 224.6 174 66.7
Lj2A555T5 Lonicera japonica HOM05D004296 ORTHO05D005045 3.6e-54 215.3 164 65.2
Lj8C228T3 Lonicera japonica HOM05D004296 ORTHO05D005045 5.2e-53 211.5 164 67.1
Atru.chr9.2192 Acer truncatum HOM05D004296 ORTHO05D005045 9.8e-52 207.2 173 63.0
QL12p012797 Quercus lobata HOM05D004296 ORTHO05D005045 5.4e-50 201.4 175 61.1
Lj8A231T11 Lonicera japonica HOM05D004296 ORTHO05D005045 9.2e-50 200.7 190 57.4
TAR375G1065 Trochodendron aralioides HOM05D004296 ORTHO05D005045 1.2e-49 200.3 171 60.8
Cfa013198 Carpinus fangiana HOM05D004296 ORTHO05D005045 3.0e-48 195.7 181 60.2
Haze_22818 Corylus avellana HOM05D004296 ORTHO05D005045 3.9e-48 195.3 181 60.2
Manes.01G061800 Manihot esculenta HOM05D004296 ORTHO05D005045 8.6e-48 194.1 168 62.5
Ciclev10002111m.g Citrus clementina HOM05D004296 ORTHO05D005045 1.5e-47 193.4 169 60.4
Prupe.5G099900 Prunus persica HOM05D004296 ORTHO05D005045 1.5e-47 193.4 175 58.9
TAR268G0002 Trochodendron aralioides HOM05D004296 ORTHO05D005045 1.5e-47 193.4 176 60.8
Cc10_g03910 Coffea canephora HOM05D004296 ORTHO05D005045 5.6e-47 191.4 153 62.7
Thecc.03G278500 Theobroma cacao HOM05D004296 ORTHO05D005045 5.6e-47 191.4 176 60.8
Nitab4.5_0001615g0200 Nicotiana tabacum HOM05D004296 ORTHO05D005045 7.3e-47 191.0 168 63.1
Duzib068G1191 Durio zibethinus HOM05D004296 ORTHO05D005045 9.5e-47 190.7 163 63.8
SGA_v2.0_scaffold96G28938 Striga asiatica HOM05D004296 ORTHO05D005045 9.5e-47 190.7 168 60.1
Actinidia14560 Actinidia chinensis HOM05D004296 ORTHO05D005045 1.2e-46 190.3 179 60.9
Oeu009155.1 Olea europaea HOM05D004296 ORTHO05D005045 1.6e-46 189.9 171 58.5
TWI18G1338 Tripterygium wilfordii HOM05D004296 ORTHO05D005045 6.2e-46 188.0 177 57.1
MSTRG.11985 Avicennia marina HOM05D004296 ORTHO05D005045 1.0e-45 187.2 173 57.8
COL.COLO4_34461 Corchorus olitorius HOM05D001502 ORTHO05D002950 2.3e-45 186.0 161 60.9
Sc01g0009550 Simmondsia chinensis HOM05D004296 ORTHO05D005045 6.8e-45 184.5 157 61.1
Gohir.A05G299133 Gossypium hirsutum HOM05D004296 ORTHO05D005045 8.9e-45 184.1 172 58.1
Nn1g01503 Nelumbo nucifera HOM05D004296 ORTHO05D005045 2.0e-44 183.0 171 59.6
Gohir.D05G298900 Gossypium hirsutum HOM05D004296 ORTHO05D005045 2.6e-44 182.6 172 57.6
Gorai.009G316100 Gossypium raimondii HOM05D004296 ORTHO05D005045 5.8e-44 181.4 172 57.6
CiPaw.08G074700 Carya illinoinensis HOM05D004296 ORTHO05D005045 9.8e-44 180.6 170 56.5
MSTRG.11987 Avicennia marina HOM05D004296 ORTHO05D005045 1.3e-43 180.3 154 59.1
MD14G1104200 Malus domestica HOM05D004296 ORTHO05D005045 1.3e-43 180.3 171 56.1
TPR.G3981 Trifolium pratense HOM05D004296 ORTHO05D005045 1.3e-43 180.3 172 54.1
TWI36G1592 Tripterygium wilfordii HOM05D004296 ORTHO05D005045 3.7e-43 178.7 154 60.4
PGSC0003DMG401005999 Solanum tuberosum HOM05D004296 ORTHO05D005045 4.9e-43 178.3 173 57.2
CAN.G774.35 Capsicum annuum HOM05D004296 ORTHO05D005045 6.4e-43 177.9 173 57.8
Psat7g254600 Pisum sativum HOM05D004296 ORTHO05D005045 6.4e-43 177.9 177 52.0
DCAR_000614 Daucus carota HOM05D004296 ORTHO05D005045 8.3e-43 177.6 172 55.2
RcHm_v2.0_Chr7g0197731 Rosa chinensis HOM05D004296 ORTHO05D005045 1.1e-42 177.2 169 56.2
Peaxi162Scf00119g00828 Petunia axillaris HOM05D004296 ORTHO05D005045 2.4e-42 176.0 172 58.1
Sopen04g002480 Solanum pennellii HOM05D004296 ORTHO05D005045 2.4e-42 176.0 173 56.6
Migut.A00767 Erythranthe guttata HOM05D004296 ORTHO05D005045 3.2e-42 175.6 167 58.1
SalBow7G4152 Salvia bowleyana HOM05D004296 ORTHO05D005045 3.2e-42 175.6 161 55.3
PGSC0003DMG403005999 Solanum tuberosum HOM05D004296 ORTHO05D005045 4.1e-42 175.3 173 56.1
Psat1g061240 Pisum sativum HOM05D004296 ORTHO05D005045 7.0e-42 174.5 176 51.7
Oeu020615.1 Olea europaea HOM05D004296 ORTHO05D005045 9.2e-42 174.1 159 57.9
Hund05589 Selenicereus undatus HOM05D004296 ORTHO05D005045 9.2e-42 174.1 162 56.8
Solyc04g007420.4 Solanum lycopersicum HOM05D004296 ORTHO05D005045 1.2e-41 173.7 173 55.5
PGSC0003DMG400012342 Solanum tuberosum HOM05D004296 ORTHO05D005045 1.2e-41 173.7 173 54.9
SalBow1G8718 Salvia bowleyana HOM05D004296 ORTHO05D005045 3.5e-41 172.2 161 54.0
Glyma.20G061500 Glycine max HOM05D004296 ORTHO05D005045 6.0e-41 171.4 171 56.1
Medtr6g011320 Medicago truncatula HOM05D004296 ORTHO05D005045 1.7e-40 169.9 167 53.3
Solyc08g081040.3 Solanum lycopersicum HOM05D004296 ORTHO05D005045 3.9e-40 168.7 172 55.2
Medtr0768s0010 Medicago truncatula HOM05D004296 ORTHO05D005045 5.0e-40 168.3 172 51.7
Nitab4.5_0011683g0020 Nicotiana tabacum HOM05D004296 ORTHO05D005045 5.0e-40 168.3 173 56.1
Sopen08g029360 Solanum pennellii HOM05D004296 ORTHO05D005045 8.6e-40 167.5 172 54.1
Cpa.g.sc39.99 Carica papaya HOM05D004296 ORTHO05D005045 1.5e-39 166.8 171 55.0
Glyma.01G220000 Glycine max HOM05D004296 ORTHO05D005045 5.6e-39 164.9 166 57.2
HanXRQChr03g0086721 Helianthus annuus HOM05D004296 ORTHO05D005045 5.6e-39 164.9 158 55.1
QL05p087372 Quercus lobata HOM05D004296 ORTHO05D005045 5.6e-39 164.9 183 54.1
PGR031G2604 Punica granatum HOM05D004296 ORTHO05D005045 7.3e-39 164.5 169 53.3
Ah.12g054620 Amaranthus hybridus HOM05D004296 ORTHO05D005045 9.5e-39 164.1 169 56.2
Cpa.g.sc45.44 Carica papaya HOM05D004296 ORTHO05D005045 2.1e-38 162.9 174 52.9
Eucgr.D01846 Eucalyptus grandis HOM05D004296 ORTHO05D005045 2.1e-38 162.9 143 58.0
HanXRQChr03g0086731 Helianthus annuus HOM05D004296 ORTHO05D005045 2.1e-38 162.9 158 55.7
FAN07G0166 Fragaria x ananassa HOM05D004296 ORTHO05D005045 3.6e-38 162.2 163 54.0
Phvul.002G157700 Phaseolus vulgaris HOM05D004296 ORTHO05D005045 3.6e-38 162.2 172 52.9
MD07G1059600 Malus domestica HOM05D004296 ORTHO05D005045 1.1e-37 160.6 187 50.3
Sed0022715 Sechium edule HOM05D004296 ORTHO05D005045 1.8e-37 159.8 176 51.1
Potri.003G127200 Populus trichocarpa HOM05D004296 ORTHO05D005045 2.3e-37 159.5 177 52.5
MELO3C016352.2 Cucumis melo HOM05D004296 ORTHO05D005045 3.1e-37 159.1 160 52.5
CsaV3_4G005960 Cucumis sativus L. HOM05D004296 ORTHO05D005045 4.0e-37 158.7 159 52.2
Lalb_Chr20g0109121 Lupinus albus HOM05D004296 ORTHO05D005045 4.0e-37 158.7 139 56.1
Peaxi162Scf00014g00082 Petunia axillaris HOM05D004296 ORTHO05D005045 4.0e-37 158.7 160 56.9
Phvul.005G126900 Phaseolus vulgaris HOM05D004296 ORTHO05D005045 5.2e-37 158.3 168 53.0
FAN08G1593 Fragaria x ananassa HOM05D004296 ORTHO05D005045 8.9e-37 157.5 150 55.3
VMungo1080G1277 Vigna mungo HOM05D004296 ORTHO05D005045 1.2e-36 157.1 160 54.4
LjContig00312_ERROPOS870357g0005117 Lotus japonicus HOM05D004296 ORTHO05D005045 2.0e-36 156.4 167 52.1
Lsat_1_v5_gn_6_87401 Lactuca sativa HOM05D004296 ORTHO05D005045 2.6e-36 156.0 168 51.2
AUR62007249 Chenopodium quinoa HOM05D004296 ORTHO05D005045 5.8e-36 154.8 168 52.4
ClCG07G008080 Citrullus lanatus HOM05D004296 ORTHO05D005045 7.5e-36 154.5 155 57.4
FAN17G1800 Fragaria x ananassa HOM05D004296 ORTHO05D005045 1.3e-35 153.7 159 52.2
Lsat_1_v5_gn_5_92680 Lactuca sativa HOM05D004296 ORTHO05D005045 2.2e-35 152.9 164 52.4
TPR.G4254 Trifolium pratense HOM05D004296 ORTHO05D005045 2.9e-35 152.5 172 47.7
FAN07G0122 Fragaria x ananassa HOM05D004296 ORTHO05D005045 8.3e-35 151.0 158 52.5
FAN12G3540 Fragaria x ananassa HOM05D004296 ORTHO05D005045 8.3e-35 151.0 163 50.3
EL10Ac8g19045 Beta vulgaris HOM05D004296 ORTHO05D005045 1.1e-34 150.6 166 52.4
FAN04G1575 Fragaria x ananassa HOM05D004296 ORTHO05D005045 1.4e-34 150.2 137 56.2
FvH4_5g02380 Fragaria vesca HOM05D004296 ORTHO05D005045 1.9e-34 149.8 137 56.2
Hund17074 Selenicereus undatus HOM05D004296 ORTHO05D005045 2.4e-34 149.4 176 51.1
arahy.Tifrunner.gnm1.ann1.SKNY54 Arachis hypogaea HOM05D004296 ORTHO05D005045 2.1e-33 146.4 171 46.8
FvH4_4g36830 Fragaria vesca HOM05D004296 ORTHO05D005045 2.1e-33 146.4 137 55.5
FAN12G1413 Fragaria x ananassa HOM05D004296 ORTHO05D005045 2.1e-33 146.4 137 55.5
arahy.Tifrunner.gnm1.ann1.KQ253K Arachis hypogaea HOM05D004296 ORTHO05D005045 2.7e-33 146.0 171 46.8
Rhsim02G0230400 Rhododendron simsii HOM05D004296 ORTHO05D005045 4.6e-33 145.2 128 60.2
arahy.Tifrunner.gnm1.ann1.CEX2YD Arachis hypogaea HOM05D004296 ORTHO05D005045 1.7e-32 143.3 171 46.2
MBI18_g42175_MAGBIO Magnolia biondii HOM05D004296 ORTHO05D005045 3.0e-32 142.5 177 49.2
SHI24854 Sapria himalayana HOM05D004296 ORTHO05D005045 3.9e-32 142.1 175 48.6
PSO782G5383 Papaver somniferum HOM05D004296 ORTHO05D005045 6.6e-32 141.4 173 49.1
ECA240G3612 Erigeron canadensis HOM05D004296 ORTHO05D005045 2.5e-31 139.4 153 49.0
unitig_32.g11599 Utricularia gibba HOM05D004296 ORTHO05D005045 5.6e-31 138.3 158 48.1
THA.LOC104809392 Tarenaya hassleriana HOM05D004296 ORTHO05D005045 7.3e-31 137.9 159 50.3
AUR62018749 Chenopodium quinoa HOM05D004296 ORTHO05D005045 4.0e-29 132.1 182 46.7
Aqoxy3G03757 Aquilegia oxysepala HOM05D004296 ORTHO05D005045 5.8e-28 128.3 135 50.4
PSO210G3801 Papaver somniferum HOM05D004296 ORTHO05D005045 7.6e-28 127.9 176 45.5
CDE01G0178 Ceratophyllum demersum HOM05D004296 ORTHO05D005045 2.9e-27 125.9 160 45.0
PSO478G0046 Papaver somniferum HOM05D004296 ORTHO05D005045 4.9e-27 125.2 172 46.5
Lalb_Chr09g0320981 Lupinus albus HOM05D004296 ORTHO05D005045 1.1e-26 124.0 140 46.4
Aa31LG9G640 Aethionema arabicum HOM05D004296 ORTHO05D005045 1.9e-26 123.2 138 50.0
Rhsim02G0230900 Rhododendron simsii HOM05D004296 ORTHO05D005045 1.9e-26 123.2 84 70.2
HPP92_021782 Vanilla planifolia HOM05D004296 ORTHO05D005045 3.2e-26 122.5 149 47.0
BcaB06g27609 Brassica carinata HOM05D004296 ORTHO05D005045 7.1e-26 121.3 180 44.4
Carub.0007s3425 Capsella rubella HOM05D004296 ORTHO05D005045 7.1e-26 121.3 161 47.8
CDE04G2006 Ceratophyllum demersum HOM05D004296 ORTHO05D005045 9.2e-26 120.9 165 43.0
AL7G48180 Arabidopsis lyrata HOM05D004296 ORTHO05D005045 2.7e-25 119.4 168 47.0
FAN13G2230 Fragaria x ananassa HOM05D004296 ORTHO05D005045 2.7e-25 119.4 117 53.8
CAN.G1069.19 Capsicum annuum HOM05D004296 ORTHO05D005045 3.5e-25 119.0 114 57.0
Aqoxy3G00118 Aquilegia oxysepala HOM05D004296 ORTHO05D005045 4.6e-25 118.6 120 51.7
Thhalv10028247m.g Eutrema salsugineum HOM05D004296 ORTHO05D005045 4.6e-25 118.6 165 47.3
Psat0s5346g0040 Pisum sativum HOM05D002378 ORTHO05D002936 1.3e-24 117.1 106 52.8
BcaC02g08973 Brassica carinata HOM05D004296 ORTHO05D005045 2.3e-24 116.3 180 41.7
C04p48320 Brassica napus HOM05D004296 ORTHO05D005045 2.3e-24 116.3 163 44.8
BolC4t26425H Brassica oleracea HOM05D004296 ORTHO05D005045 2.3e-24 116.3 180 41.7
A04p14410 Brassica napus HOM05D004296 ORTHO05D005045 3.0e-24 115.9 165 43.6
BraA04t17088Z Brassica rapa HOM05D004296 ORTHO05D005045 3.0e-24 115.9 165 43.6
CARHR213060 Cardamine hirsuta HOM05D004296 ORTHO05D005045 2.5e-23 112.8 162 43.2
Sp7g00660 Schrenkiella parvula HOM05D004296 ORTHO05D005045 2.5e-23 112.8 165 47.3
SpUn0010_0140 Schrenkiella parvula HOM05D004296 ORTHO05D005045 2.5e-23 112.8 165 47.3
Sabra01G0078900 Salix brachista HOM05D004296 ORTHO05D005045 1.6e-22 110.2 82 63.4
Carub.0001s0729 Capsella rubella HOM05D004296 ORTHO05D005045 3.6e-22 109.0 150 43.3
Os01g0541600 Oryza sativa ssp. japonica HOM05D004296 ORTHO05D005045 3.1e-21 105.9 152 44.1
AT5G41270 Arabidopsis thaliana HOM05D004296 ORTHO05D005045 4.0e-21 105.5 170 41.2
Haze_21601 Corylus avellana HOM05D004296 ORTHO05D005045 1.5e-20 103.6 83 62.7
arahy.Tifrunner.gnm1.ann1.W3QJXS Arachis hypogaea HOM05D004296 ORTHO05D005045 2.0e-20 103.2 101 53.5
Oeu009158.1 Olea europaea HOM05D004296 ORTHO05D005045 2.6e-20 102.8 132 44.7
ATR0680G148 Amborella trichopoda HOM05D004296 ORTHO05D005045 1.7e-19 100.1 142 40.1
Thhalv10027895m.g Eutrema salsugineum HOM05D004296 ORTHO05D005045 2.2e-19 99.8 165 41.8
Sed0002821 Sechium edule HOM05D004296 ORTHO05D005045 6.4e-19 98.2 127 44.9
Nitab4.5_0003441g0080 Nicotiana tabacum HOM05D004296 ORTHO05D005045 1.4e-18 97.1 83 57.8
FAN18G3255 Fragaria x ananassa HOM05D004296 ORTHO05D005045 4.2e-18 95.5 91 51.6
Zm00001eb162950 Zea mays HOM05D004296 ORTHO05D005045 4.2e-18 95.5 152 38.2
SEGI_21744 Sequoiadendron giganteum HOM05D004296 ORTHO05D005045 3.0e-16 89.4 152 41.4
PGSC0003DMG402005999 Solanum tuberosum HOM05D004296 ORTHO05D005045 5.1e-16 88.6 86 58.1
PSO210G3847 Papaver somniferum HOM05D004296 ORTHO05D005045 5.6e-15 85.1 67 58.2
Mapoly0057s0058 Marchantia polymorpha HOM05D004296 ORTHO05D005045 1.5e-12 77.0 116 39.7
Pp3c22_14200 Physcomitrium patens HOM05D004296 ORTHO05D005045 7.1e-10 68.2 173 35.3
ATR0680G137 Amborella trichopoda HOM05D004296 ORTHO05D005045 2.1e-09 66.6 55 52.7
Cfa014102 Carpinus fangiana HOM05D004296 ORTHO05D005045 2.7e-09 66.2 50 64.0
Os01g0531000 Oryza sativa ssp. japonica HOM05D004296 ORTHO05D005045 3.0e-08 62.8 59 47.5
arahy.Tifrunner.gnm1.ann1.BHE6V7 Arachis hypogaea HOM05D004296 ORTHO05D005045 8.7e-08 61.2 154 29.9
CAN.G774.37 Capsicum annuum HOM05D001502 ORTHO05D002950 2.1e-06 56.6 66 43.9


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