Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0028136 Camellia sinensis var. sinensis HOM05D002615 ORTHO05D002913 5.2e-35 150.6 81 100.0
CSS0006789 Camellia sinensis var. sinensis HOM05D002615 ORTHO05D002913 9.5e-21 103.2 69 85.5
Dinv10694 Davidia involucrata HOM05D002615 ORTHO05D002913 7.8e-15 83.6 69 68.1
Actinidia19004 Actinidia chinensis HOM05D002615 ORTHO05D002913 1.7e-14 82.4 69 69.6
CSS0023861 Camellia sinensis var. sinensis HOM05D002615 ORTHO05D002913 1.2e-12 76.3 69 68.1
Actinidia35030 Actinidia chinensis HOM05D002615 ORTHO05D002913 2.1e-12 75.5 69 65.2
Rhsim12G0151800 Rhododendron simsii HOM05D002615 ORTHO05D002913 4.4e-10 67.8 75 57.3
TAR629G3230 Trochodendron aralioides HOM05D002615 ORTHO05D002913 5.4e-08 60.8 77 54.5
PSO017G4087 Papaver somniferum HOM05D002615 ORTHO05D002913 9.2e-08 60.1 72 56.9
Rhsim08G0147600 Rhododendron simsii HOM05D002615 ORTHO05D002913 1.6e-07 59.3 75 52.0
vmacro16508 Vaccinium macrocarpon HOM05D002615 ORTHO05D002913 2.1e-07 58.9 75 53.3
PSO478G0807 Papaver somniferum HOM05D002615 ORTHO05D002913 4.6e-07 57.8 72 55.6
DCAR_026006 Daucus carota HOM05D002615 ORTHO05D002913 7.8e-07 57.0 69 46.4
Oeu027146.1 Olea europaea HOM05D002615 ORTHO05D002913 1.3e-06 56.2 69 56.5
Potri.017G092500 Populus trichocarpa HOM05D002615 ORTHO05D002913 1.3e-06 56.2 69 55.1
vmacro17596 Vaccinium macrocarpon HOM05D002615 ORTHO05D002913 1.3e-06 56.2 78 47.4
MD17G1057500 Malus domestica HOM05D002615 ORTHO05D002913 1.7e-06 55.8 79 46.8
HanXRQChr09g0270201 Helianthus annuus HOM05D002615 ORTHO05D002913 3.9e-06 54.7 69 52.2
Lsat_1_v5_gn_1_13581 Lactuca sativa HOM05D002615 ORTHO05D002913 3.9e-06 54.7 69 49.3
Potri.004G119000 Populus trichocarpa HOM05D002615 ORTHO05D002913 6.6e-06 53.9 68 50.0
Lj9A470T60 Lonicera japonica HOM05D002615 ORTHO05D002913 8.6e-06 53.5 69 49.3
Solyc06g069530.3 Solanum lycopersicum HOM05D002615 ORTHO05D002913 8.6e-06 53.5 75 46.7
Sopen06g026820 Solanum pennellii HOM05D002615 ORTHO05D002913 8.6e-06 53.5 75 46.7


User provided reference genes

Program Settings