Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0028135 Camellia sinensis var. sinensis HOM05D000309 ORTHO05D005508 5.4e-30 133.7 67 100.0
CSS0005390 Camellia sinensis var. sinensis HOM05D000309 ORTHO05D000271 9.0e-17 89.7 78 62.8
Actinidia40106 Actinidia chinensis HOM05D000309 ORTHO05D000271 1.4e-14 82.4 76 60.5
Actinidia16709 Actinidia chinensis HOM05D000309 ORTHO05D000271 5.5e-14 80.5 76 57.9
Actinidia07696 Actinidia chinensis HOM05D000309 ORTHO05D000271 7.1e-14 80.1 75 57.3
CSS0016578 Camellia sinensis var. sinensis HOM05D000309 ORTHO05D005508 9.3e-14 79.7 78 56.4
vmacro10961 Vaccinium macrocarpon HOM05D000309 ORTHO05D000271 1.6e-13 79.0 75 58.7
Rhsim03G0095400 Rhododendron simsii HOM05D000309 ORTHO05D005508 3.5e-13 77.8 78 52.6
Rhsim03G0094400 Rhododendron simsii HOM05D000309 ORTHO05D005508 6.0e-13 77.0 78 53.8
RhsimUnG0007000 Rhododendron simsii HOM05D000309 ORTHO05D005508 6.0e-13 77.0 78 53.8
CSS0008048 Camellia sinensis var. sinensis HOM05D000309 ORTHO05D000271 1.3e-12 75.9 72 58.3
CSS0035391 Camellia sinensis var. sinensis HOM05D000309 ORTHO05D000271 1.3e-12 75.9 72 58.3
Rhsim03G0094600 Rhododendron simsii HOM05D000309 ORTHO05D005508 1.3e-12 75.9 78 52.6
Rhsim03G0095200 Rhododendron simsii HOM05D000309 ORTHO05D005508 1.8e-12 75.5 78 53.8
RhsimUnG0029500 Rhododendron simsii HOM05D000309 ORTHO05D005508 1.8e-12 75.5 78 53.8
vmacro20848 Vaccinium macrocarpon HOM05D000309 ORTHO05D000271 1.8e-12 75.5 75 56.0
Rhsim03G0094900 Rhododendron simsii HOM05D000309 ORTHO05D005508 2.3e-12 75.1 75 54.7
CSS0031651 Camellia sinensis var. sinensis HOM05D000309 ORTHO05D005508 9.6e-11 69.7 70 55.7
CSS0024902 Camellia sinensis var. sinensis HOM05D000309 ORTHO05D000271 1.3e-10 69.3 70 61.4
Rhsim03G0094800 Rhododendron simsii HOM05D000309 ORTHO05D005508 1.6e-10 68.9 78 48.7
CSS0024457 Camellia sinensis var. sinensis HOM05D000309 ORTHO05D000271 1.8e-09 65.5 79 51.9
CSS0035375 Camellia sinensis var. sinensis HOM05D000309 ORTHO05D000271 4.0e-09 64.3 60 60.0
Hma1.2p1_0390F.1_g142580 Hydrangea macrophylla HOM05D000309 ORTHO05D000271 1.2e-08 62.8 72 50.0
Hma1.2p1_0020F.1_g013940 Hydrangea macrophylla HOM05D000309 ORTHO05D000271 1.5e-08 62.4 72 50.0
Hma1.2p1_0286F.1_g114190 Hydrangea macrophylla HOM05D000309 ORTHO05D000271 1.5e-08 62.4 72 50.0
Rhsim02G0209100 Rhododendron simsii HOM05D000309 ORTHO05D005508 2.0e-08 62.0 78 43.6
Hma1.2p1_0390F.1_g142590 Hydrangea macrophylla HOM05D000309 ORTHO05D000271 2.6e-08 61.6 72 48.6
Rhsim02G0211200 Rhododendron simsii HOM05D000309 ORTHO05D005508 4.5e-08 60.8 78 43.6
Hma1.2p1_0990F.1_g244910 Hydrangea macrophylla HOM05D000309 ORTHO05D000271 5.8e-08 60.5 72 47.2
Rhsim03G0095300 Rhododendron simsii HOM05D000309 ORTHO05D005508 7.6e-08 60.1 71 50.7
Rhsim02G0211000 Rhododendron simsii HOM05D000309 ORTHO05D005508 1.7e-07 58.9 78 42.3
Hma1.2p1_1008F.1_g247130 Hydrangea macrophylla HOM05D000309 ORTHO05D000271 2.2e-07 58.5 72 45.8
vmacro11234 Vaccinium macrocarpon HOM05D000309 ORTHO05D000271 3.8e-07 57.8 78 41.0
Rhsim02G0211600 Rhododendron simsii HOM05D000309 ORTHO05D005508 4.9e-07 57.4 75 42.7
TAR362G1023 Trochodendron aralioides HOM05D000309 ORTHO05D005508 4.9e-07 57.4 71 46.5
Rhsim02G0210200 Rhododendron simsii HOM05D000309 ORTHO05D005508 8.4e-07 56.6 78 43.6
Hma1.2p1_0286F.1_g114010 Hydrangea macrophylla HOM05D000309 ORTHO05D005508 1.1e-06 56.2 71 50.7
Cc08_g11290 Coffea canephora HOM05D000309 ORTHO05D000271 1.9e-06 55.5 77 41.6
Cc10_g10160 Coffea canephora HOM05D000309 ORTHO05D000271 1.9e-06 55.5 75 44.0
Rhsim02G0209500 Rhododendron simsii HOM05D000309 ORTHO05D005508 1.9e-06 55.5 70 45.7
RhsimUnG0147500 Rhododendron simsii HOM05D000309 ORTHO05D005508 1.9e-06 55.5 70 45.7
TAR626G0520 Trochodendron aralioides HOM05D000309 ORTHO05D000271 1.9e-06 55.5 71 45.1
Cc09_g07110 Coffea canephora HOM05D000309 ORTHO05D000271 2.5e-06 55.1 71 47.9
Hma1.2p1_0020F.1_g013890 Hydrangea macrophylla HOM05D000309 ORTHO05D000271 2.5e-06 55.1 72 44.4
RhsimUnG0010000 Rhododendron simsii HOM05D000309 ORTHO05D005508 2.5e-06 55.1 70 45.7
Rhsim02G0209400 Rhododendron simsii HOM05D000309 ORTHO05D005508 3.2e-06 54.7 70 45.7
TAR625G0305 Trochodendron aralioides HOM05D000309 ORTHO05D000271 3.2e-06 54.7 76 42.1
Dinv32248 Davidia involucrata HOM05D000309 ORTHO05D000271 5.5e-06 53.9 72 41.7
Dinv32251 Davidia involucrata HOM05D000309 ORTHO05D000271 5.5e-06 53.9 72 41.7
MBI13_g33564_MAGBIO Magnolia biondii HOM05D000309 ORTHO05D000271 5.5e-06 53.9 71 49.3
Cc00_g22230 Coffea canephora HOM05D000309 ORTHO05D000271 9.3e-06 53.1 77 41.6


User provided reference genes

Program Settings