Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0028132 Camellia sinensis var. sinensis HOM05D003229 ORTHO05D003835 9.5e-184 646.7 335 100.0
CSS0045009 Camellia sinensis var. sinensis HOM05D003229 ORTHO05D003835 5.7e-128 461.5 251 92.4
Actinidia12901 Actinidia chinensis HOM05D003229 ORTHO05D003835 1.1e-38 164.9 145 60.7
CSS0043544 Camellia sinensis var. sinensis HOM05D003229 ORTHO05D003835 1.0e-36 158.3 218 46.3
Rhsim13G0199400 Rhododendron simsii HOM05D003229 ORTHO05D003835 1.8e-33 147.5 214 44.9
vmacro04054 Vaccinium macrocarpon HOM05D003229 ORTHO05D003835 7.6e-32 142.1 242 40.1
Ciclev10028298m.g Citrus clementina HOM05D003229 ORTHO05D003835 2.5e-30 137.1 145 51.7
Hma1.2p1_0218F.1_g092270 Hydrangea macrophylla HOM05D003229 ORTHO05D003835 9.0e-25 118.6 286 33.2
Lj2A839T58 Lonicera japonica HOM05D003229 ORTHO05D003835 3.4e-24 116.7 252 35.3
GSVIVG01037516001 Vitis vinifera HOM05D003229 ORTHO05D003835 1.4e-22 111.3 177 41.2
Rhsim01G0198100 Rhododendron simsii HOM05D003229 ORTHO05D003835 5.1e-20 102.8 225 34.2
Cfa010230 Carpinus fangiana HOM05D003229 ORTHO05D003835 7.4e-19 99.0 258 33.3
Sc21g0006640 Simmondsia chinensis HOM05D003229 ORTHO05D003835 1.3e-18 98.2 265 33.6
Oeu058180.2 Olea europaea HOM05D003229 ORTHO05D003835 1.7e-18 97.8 265 32.5
Haze_23616 Corylus avellana HOM05D003229 ORTHO05D003835 2.8e-18 97.1 258 32.2
Atru.chr3.3041 Acer truncatum HOM05D003229 ORTHO05D003835 3.4e-16 90.1 126 46.0
Oeu048812.1 Olea europaea HOM05D003229 ORTHO05D003835 4.5e-16 89.7 140 42.9
Oeu048813.5 Olea europaea HOM05D003229 ORTHO05D003835 4.5e-16 89.7 140 42.9
TAR636G2352 Trochodendron aralioides HOM05D003229 ORTHO05D003835 5.9e-16 89.4 133 42.9
Duzib177G0022 Durio zibethinus HOM05D003229 ORTHO05D003835 1.4e-14 84.7 167 36.5
MSTRG.12405 Avicennia marina HOM05D003229 ORTHO05D003835 2.5e-14 84.0 93 52.7
CiPaw.13G105300 Carya illinoinensis HOM05D003229 ORTHO05D003835 2.5e-14 84.0 244 31.6
QL01p018824 Quercus lobata HOM05D003229 ORTHO05D003835 2.5e-14 84.0 245 31.0
RcHm_v2.0_Chr6g0255381 Rosa chinensis HOM05D003229 ORTHO05D003835 2.5e-14 84.0 122 41.8
FvH4_2g05241 Fragaria vesca HOM05D003229 ORTHO05D003835 5.5e-14 82.8 122 41.8
FAN24G0320 Fragaria x ananassa HOM05D003229 ORTHO05D003835 5.5e-14 82.8 122 41.8
Cpa.g.sc103.35 Carica papaya HOM05D003229 ORTHO05D003835 7.2e-14 82.4 149 38.9
FAN20G2341 Fragaria x ananassa HOM05D003229 ORTHO05D003835 9.4e-14 82.0 134 38.8
Nitab4.5_0000875g0020 Nicotiana tabacum HOM05D003229 ORTHO05D003835 1.2e-13 81.6 160 35.0
Cc01_g08150 Coffea canephora HOM05D003229 ORTHO05D003835 1.6e-13 81.3 147 36.7
Nitab4.5_0013078g0010 Nicotiana tabacum HOM05D003229 ORTHO05D003835 2.1e-13 80.9 147 36.7
Nitab4.5_0002498g0020 Nicotiana tabacum HOM05D003229 ORTHO05D003835 4.7e-13 79.7 111 42.3
Gohir.D13G092701 Gossypium hirsutum HOM05D003229 ORTHO05D003835 7.9e-13 79.0 113 43.4
MBI11_g25050_MAGBIO Magnolia biondii HOM05D003229 ORTHO05D003835 7.9e-13 79.0 103 45.6
Nn2g14458 Nelumbo nucifera HOM05D003229 ORTHO05D003835 7.9e-13 79.0 135 43.7
arahy.Tifrunner.gnm1.ann1.B3GIUW Arachis hypogaea HOM05D003229 ORTHO05D003835 1.4e-12 78.2 138 41.3
Lalb_Chr17g0347381 Lupinus albus HOM05D003229 ORTHO05D003835 1.4e-12 78.2 153 35.9
MD03G1161300 Malus domestica HOM05D003229 ORTHO05D003835 1.4e-12 78.2 150 40.0
Hund20968 Selenicereus undatus HOM05D003229 ORTHO05D003835 1.8e-12 77.8 119 45.4
arahy.Tifrunner.gnm1.ann1.M286MP Arachis hypogaea HOM05D003229 ORTHO05D003835 2.3e-12 77.4 138 41.3
Gohir.A13G086615 Gossypium hirsutum HOM05D003229 ORTHO05D003835 2.3e-12 77.4 113 42.5
Gorai.010G139700 Gossypium raimondii HOM05D003229 ORTHO05D003835 3.9e-12 76.6 113 42.5
vmacro14301 Vaccinium macrocarpon HOM05D003229 ORTHO05D003835 3.9e-12 76.6 85 50.6
Prupe.6G179900 Prunus persica HOM05D003229 ORTHO05D003835 5.1e-12 76.3 105 44.8
TWI31G0893 Tripterygium wilfordii HOM05D003229 ORTHO05D003835 6.7e-12 75.9 127 39.4
MBI05_g37661_MAGBIO Magnolia biondii HOM05D003229 ORTHO05D003835 1.5e-11 74.7 125 37.6
PGSC0003DMG400002995 Solanum tuberosum HOM05D003229 ORTHO05D003835 1.5e-11 74.7 128 39.8
Aqoxy1G00567 Aquilegia oxysepala HOM05D003229 ORTHO05D003835 2.0e-11 74.3 119 38.7
Nitab4.5_0010116g0010 Nicotiana tabacum HOM05D003229 ORTHO05D003835 2.6e-11 73.9 116 41.4
AUR62001585 Chenopodium quinoa HOM05D003229 ORTHO05D003835 4.4e-11 73.2 239 30.5
SGA_v2.0_scaffold16G07545 Striga asiatica HOM05D003229 ORTHO05D003835 7.4e-11 72.4 117 40.2
TWI79G1121 Tripterygium wilfordii HOM05D003229 ORTHO05D003835 7.4e-11 72.4 120 38.3
FAN27G0679 Fragaria x ananassa HOM05D003229 ORTHO05D003835 1.3e-10 71.6 135 38.5
Sabra09G0121900 Salix brachista HOM05D003229 ORTHO05D003835 1.7e-10 71.2 233 30.5
AUR62020197 Chenopodium quinoa HOM05D003229 ORTHO05D003835 2.8e-10 70.5 239 30.5
Duzib128G0535 Durio zibethinus HOM05D003229 ORTHO05D003835 8.2e-10 68.9 134 36.6
Solyc11g071690.3 Solanum lycopersicum HOM05D003229 ORTHO05D003835 8.2e-10 68.9 128 38.3
Peaxi162Scf00355g00005 Petunia axillaris HOM05D003229 ORTHO05D003835 1.1e-09 68.6 245 29.0
FAN15G3758 Fragaria x ananassa HOM05D003229 ORTHO05D003835 1.8e-09 67.8 138 38.4
PGSC0003DMG400005910 Solanum tuberosum HOM05D003229 ORTHO05D003835 4.1e-09 66.6 94 41.5
EL10Ac7g16254 Beta vulgaris HOM05D003229 ORTHO05D003835 7.0e-09 65.9 251 28.3
Eucgr.J00598 Eucalyptus grandis HOM05D003229 ORTHO05D003835 7.0e-09 65.9 118 37.3
Gohir.D13G092751 Gossypium hirsutum HOM05D003229 ORTHO05D003835 7.0e-09 65.9 177 31.1
TPR.G13300 Trifolium pratense HOM05D003229 ORTHO05D003835 7.0e-09 65.9 141 32.6
Manes.11G104500 Manihot esculenta HOM05D003229 ORTHO05D003835 9.1e-09 65.5 115 36.5
Sopen06g030210 Solanum pennellii HOM05D003229 ORTHO05D003835 1.2e-08 65.1 124 37.9
CANSAT35G0213 Cannabis sativa HOM05D003229 ORTHO05D003835 2.0e-08 64.3 194 27.3
Solyc06g073810.4 Solanum lycopersicum HOM05D003229 ORTHO05D003835 2.0e-08 64.3 94 41.5
Ca_06127_v3 Cicer arietinum L. HOM05D003229 ORTHO05D003835 2.6e-08 63.9 134 33.6
Peaxi162Scf01091g00018 Petunia axillaris HOM05D003229 ORTHO05D003835 2.6e-08 63.9 147 30.6
Migut.N02427 Erythranthe guttata HOM05D003229 ORTHO05D003835 3.4e-08 63.5 213 31.5
Thecc.05G214900 Theobroma cacao HOM05D003229 ORTHO05D003835 7.7e-08 62.4 109 35.8
Glyma.20G055200 Glycine max HOM05D003229 ORTHO05D003835 1.0e-07 62.0 246 28.5
CAN.G481.58 Capsicum annuum HOM05D004333 ORTHO05D005363 1.7e-07 61.2 59 49.2
CAN.G2071.4 Capsicum annuum HOM05D003229 ORTHO05D003835 3.8e-07 60.1 94 42.6
SGA_v2.0_scaffold82G26251 Striga asiatica HOM05D003229 ORTHO05D003835 6.5e-07 59.3 117 36.8
Dinv25091 Davidia involucrata HOM05D003229 ORTHO05D003835 8.5e-07 58.9 104 35.6
CDE01G0204 Ceratophyllum demersum HOM05D003229 ORTHO05D003835 2.5e-06 57.4 147 30.6
Gorai.010G139800 Gossypium raimondii HOM05D003229 ORTHO05D003835 9.4e-06 55.5 82 43.9


User provided reference genes

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