Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0015874 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 5.9e-59 230.7 122 100.0
CSS0028097 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 5.9e-59 230.7 122 100.0
CSS0029131 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 3.1e-55 218.4 122 95.1
Rhsim10G0068900 Rhododendron simsii HOM05D006288 ORTHO05D007416 5.4e-52 207.6 123 88.6
Rhsim08G0078400 Rhododendron simsii HOM05D006288 ORTHO05D007416 7.8e-51 203.8 123 86.2
Dinv34894 Davidia involucrata HOM05D006288 ORTHO05D007416 3.0e-50 201.8 121 84.3
vmacro18118 Vaccinium macrocarpon HOM05D006288 ORTHO05D007416 3.0e-50 201.8 119 87.4
GSVIVG01036516001 Vitis vinifera HOM05D006288 ORTHO05D007416 3.9e-50 201.4 122 84.4
Hma1.2p1_0304F.1_g119265 Hydrangea macrophylla HOM05D006288 ORTHO05D007416 4.0e-47 191.4 122 79.5
Hma1.2p1_0304F.1_g119270 Hydrangea macrophylla HOM05D006288 ORTHO05D007416 4.0e-47 191.4 122 79.5
Oeu007090.1 Olea europaea HOM05D006288 ORTHO05D007416 3.4e-46 188.3 116 81.0
Duzib133G0644 Durio zibethinus HOM05D006288 ORTHO05D007416 5.8e-46 187.6 120 81.7
Duzib133G1254 Durio zibethinus HOM05D006288 ORTHO05D007416 5.8e-46 187.6 120 81.7
Manes.01G106000 Manihot esculenta HOM05D006288 ORTHO05D007416 5.8e-46 187.6 124 79.8
Cc07_g04640 Coffea canephora HOM05D006288 ORTHO05D007416 7.5e-46 187.2 114 83.3
Gohir.D12G056100 Gossypium hirsutum HOM05D006288 ORTHO05D007416 1.3e-45 186.4 120 81.7
Gorai.008G059200 Gossypium raimondii HOM05D006288 ORTHO05D007416 1.3e-45 186.4 120 81.7
Gohir.A12G056700 Gossypium hirsutum HOM05D006288 ORTHO05D007416 6.4e-45 184.1 120 80.8
Migut.K00879 Erythranthe guttata HOM05D006288 ORTHO05D007416 2.4e-44 182.2 114 78.9
Sopen02g015910 Solanum pennellii HOM05D006288 ORTHO05D007416 2.4e-44 182.2 114 80.7
PGSC0003DMG400026550 Solanum tuberosum HOM05D006288 ORTHO05D007416 2.4e-44 182.2 112 82.1
Cfa007713 Carpinus fangiana HOM05D006288 ORTHO05D007416 4.1e-44 181.4 121 79.3
Nitab4.5_0003203g0060 Nicotiana tabacum HOM05D006288 ORTHO05D007416 4.1e-44 181.4 114 82.5
Thecc.10G108100 Theobroma cacao HOM05D005170 ORTHO05D007416 4.1e-44 181.4 120 80.0
TAR629G2245 Trochodendron aralioides HOM05D006288 ORTHO05D007416 4.1e-44 181.4 120 78.3
Atru.chr8.595 Acer truncatum HOM05D006288 ORTHO05D007416 7.1e-44 180.6 122 75.4
PGR004G0851 Punica granatum HOM05D006288 ORTHO05D007416 9.2e-44 180.3 123 78.0
Solyc02g065690.3 Solanum lycopersicum HOM05D006288 ORTHO05D007416 9.2e-44 180.3 112 81.2
Peaxi162Scf00019g00316 Petunia axillaris HOM05D006288 ORTHO05D007416 1.2e-43 179.9 114 80.7
CSS0016762 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 1.6e-43 179.5 120 80.0
CSS0047986 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 1.6e-43 179.5 120 80.0
PSO210G6985 Papaver somniferum HOM05D006288 ORTHO05D007416 2.1e-43 179.1 122 73.8
PSO832G2920 Papaver somniferum HOM05D006288 ORTHO05D007416 2.1e-43 179.1 122 74.6
Prupe.3G247000 Prunus persica HOM05D006288 ORTHO05D007416 2.7e-43 178.7 119 79.0
Manes.02G062500 Manihot esculenta HOM05D006288 ORTHO05D007416 7.8e-43 177.2 115 79.1
Hund16253 Selenicereus undatus HOM05D006288 ORTHO05D007416 7.8e-43 177.2 116 75.9
TWI60G1717 Tripterygium wilfordii HOM05D006288 ORTHO05D007416 1.3e-42 176.4 113 81.4
Lj3g0015520 Lotus japonicus HOM05D006288 ORTHO05D007416 2.3e-42 175.6 112 79.5
TPR.G14566 Trifolium pratense HOM05D006288 ORTHO05D007416 2.3e-42 175.6 116 77.6
RcHm_v2.0_Chr2g0164421 Rosa chinensis HOM05D006288 ORTHO05D007416 6.6e-42 174.1 112 77.7
arahy.Tifrunner.gnm1.ann1.J0I6JM Arachis hypogaea HOM05D006288 ORTHO05D007416 8.6e-42 173.7 115 75.7
SalBow7G0779 Salvia bowleyana HOM05D006288 ORTHO05D007416 8.6e-42 173.7 120 75.0
Ah.16g100880 Amaranthus hybridus HOM05D006288 ORTHO05D007416 1.1e-41 173.3 126 70.6
Sc11g0008960 Simmondsia chinensis HOM05D006288 ORTHO05D007416 1.1e-41 173.3 113 77.0
SGA_v2.0_scaffold30G12393 Striga asiatica HOM05D006288 ORTHO05D007416 1.1e-41 173.3 122 70.5
Ca_13697_v3 Cicer arietinum L. HOM05D006288 ORTHO05D007416 1.5e-41 172.9 115 78.3
PSO675G0562 Papaver somniferum HOM05D006288 ORTHO05D007416 1.5e-41 172.9 122 72.1
PSO541G1058 Papaver somniferum HOM05D006288 ORTHO05D007416 2.5e-41 172.2 122 73.0
CiPaw.03G081300 Carya illinoinensis HOM05D006288 ORTHO05D007416 3.3e-41 171.8 121 75.2
MD09G1077100 Malus domestica HOM05D006288 ORTHO05D007416 3.3e-41 171.8 120 73.3
Medtr3g034300 Medicago truncatula HOM05D006288 ORTHO05D007416 3.3e-41 171.8 116 76.7
MD17G1067500 Malus domestica HOM05D006288 ORTHO05D007416 2.1e-40 169.1 119 70.6
ATR0691G027 Amborella trichopoda HOM05D006288 ORTHO05D007416 2.8e-40 168.7 117 70.9
Lalb_Chr21g0318141 Lupinus albus HOM05D006288 ORTHO05D007416 3.6e-40 168.3 121 71.9
Cpa.g.sc14.255 Carica papaya HOM05D006288 ORTHO05D007416 4.7e-40 167.9 117 74.4
Glyma.13G051400 Glycine max HOM05D006288 ORTHO05D007416 4.7e-40 167.9 116 75.0
Glyma.19G037000 Glycine max HOM05D006288 ORTHO05D007416 4.7e-40 167.9 116 75.9
Psat5g210920 Pisum sativum HOM05D006288 ORTHO05D007416 4.7e-40 167.9 116 75.0
Lsat_1_v5_gn_4_174040 Lactuca sativa HOM05D006288 ORTHO05D007416 6.2e-40 167.5 121 71.9
QL09p029462 Quercus lobata HOM05D006288 ORTHO05D007416 8.1e-40 167.2 120 74.2
Psat5g210840 Pisum sativum HOM05D006288 ORTHO05D007416 1.4e-39 166.4 110 75.5
VMungo0464G1523 Vigna mungo HOM05D006288 ORTHO05D007416 1.8e-39 166.0 115 74.8
CsaV3_4G009920 Cucumis sativus L. HOM05D006288 ORTHO05D007416 2.3e-39 165.6 121 72.7
Psat5g212400 Pisum sativum HOM05D006288 ORTHO05D007416 4.0e-39 164.9 116 71.6
Eucgr.F02878 Eucalyptus grandis HOM05D006288 ORTHO05D007416 5.2e-39 164.5 112 75.9
Phvul.004G044700 Phaseolus vulgaris HOM05D006288 ORTHO05D007416 1.2e-38 163.3 115 73.0
Actinidia26277 Actinidia chinensis HOM05D006288 ORTHO05D007416 3.4e-38 161.8 122 68.9
CANSAT64G2264 Cannabis sativa HOM05D005170 ORTHO05D007416 7.6e-38 160.6 110 75.5
Actinidia17612 Actinidia chinensis HOM05D006288 ORTHO05D007416 9.9e-38 160.2 109 77.1
Os02g0190900 Oryza sativa ssp. japonica HOM05D006288 ORTHO05D007416 1.7e-37 159.5 113 72.6
THA.LOC104805112 Tarenaya hassleriana HOM05D006288 ORTHO05D007416 8.3e-37 157.1 110 70.9
EL10Ac2g04409 Beta vulgaris HOM05D006288 ORTHO05D007416 1.9e-36 156.0 119 67.2
AUR62023135 Chenopodium quinoa HOM05D006288 ORTHO05D007416 9.2e-36 153.7 119 65.5
FAN10G3625 Fragaria x ananassa HOM05D006288 ORTHO05D007416 2.1e-35 152.5 102 73.5
unitig_32.g10759 Utricularia gibba HOM05D006288 ORTHO05D007416 2.7e-35 152.1 118 64.4
Zm00001eb234970 Zea mays HOM05D006288 ORTHO05D007416 2.3e-34 149.1 109 67.9
SEGI_23755 Sequoiadendron giganteum HOM05D006288 ORTHO05D007416 3.0e-34 148.7 115 66.1
Nn4g23570 Nelumbo nucifera HOM05D006288 ORTHO05D007416 5.6e-33 144.4 121 63.6
Atru.BG.156.p Acer truncatum HOM05D006288 ORTHO05D007416 1.2e-32 143.3 94 73.4
FAN10G2886 Fragaria x ananassa HOM05D006288 ORTHO05D007416 1.2e-32 143.3 102 71.6
FAN14G1171 Fragaria x ananassa HOM05D006288 ORTHO05D007416 1.2e-32 143.3 116 64.7
Sabra17G0089200 Salix brachista HOM05D006288 ORTHO05D007416 2.8e-32 142.1 96 75.0
C07p39960 Brassica napus HOM05D006288 ORTHO05D007416 4.7e-32 141.4 104 67.3
BolC7t44529H Brassica oleracea HOM05D006288 ORTHO05D007416 4.7e-32 141.4 104 66.3
CAN.G93.47 Capsicum annuum HOM05D006288 ORTHO05D007416 6.2e-32 141.0 113 63.7
BraA06t26742Z Brassica rapa HOM05D006288 ORTHO05D007416 1.1e-31 140.2 104 66.3
Nitab4.5_0002249g0090 Nicotiana tabacum HOM05D006288 ORTHO05D007416 3.1e-31 138.7 78 89.7
Hma1.2p1_2186F.1_g316383 Hydrangea macrophylla HOM05D006288 ORTHO05D007416 3.4e-30 135.2 78 85.9
Hma1.2p1_3488F.1_g336360 Hydrangea macrophylla HOM05D006288 ORTHO05D007416 3.4e-30 135.2 78 85.9
HPP92_018391 Vanilla planifolia HOM05D006288 ORTHO05D007416 3.4e-30 135.2 109 65.1
Lsat_1_v5_gn_4_173980 Lactuca sativa HOM05D006288 ORTHO05D007416 1.3e-29 133.3 121 58.7
TAR371G0310 Trochodendron aralioides HOM05D006288 ORTHO05D007416 1.1e-28 130.2 93 72.0
DCAR_011002 Daucus carota HOM05D006288 ORTHO05D007416 4.2e-28 128.3 76 85.5
COL.COLO4_00228 Corchorus olitorius HOM05D006288 ORTHO05D007416 7.1e-28 127.5 76 85.5
MELO3C018910.2 Cucumis melo HOM05D006288 ORTHO05D007416 1.2e-27 126.7 121 59.5
Carub.0008s0943 Capsella rubella HOM05D006288 ORTHO05D007416 1.6e-27 126.3 110 60.0
Potri.017G106200 Populus trichocarpa HOM05D006288 ORTHO05D007416 4.6e-27 124.8 121 57.9
Sed0021882 Sechium edule HOM05D006288 ORTHO05D007416 2.3e-26 122.5 120 57.5
ECA232G4388 Erigeron canadensis HOM05D006288 ORTHO05D007416 3.9e-26 121.7 113 55.8
CDE10G0042 Ceratophyllum demersum HOM05D006288 ORTHO05D007416 5.1e-26 121.3 92 63.0
ClCG07G016140 Citrullus lanatus HOM05D006288 ORTHO05D007416 5.1e-26 121.3 117 56.4
FAN05G5526 Fragaria x ananassa HOM05D006288 ORTHO05D007416 7.3e-25 117.5 116 56.9
FAN02G0987 Fragaria x ananassa HOM05D006288 ORTHO05D007416 1.6e-24 116.3 116 55.2
FAN09G1057 Fragaria x ananassa HOM05D010582 ORTHO05D007416 1.6e-24 116.3 116 55.2
Aa31LG7G12050 Aethionema arabicum HOM05D006288 ORTHO05D007416 4.8e-24 114.8 114 54.4
FvH4_6g46100 Fragaria vesca HOM05D006288 ORTHO05D007416 5.8e-22 107.8 69 76.8
HanXRQChr15g0464891 Helianthus annuus HOM05D006288 ORTHO05D007416 5.8e-22 107.8 95 57.9
Mapoly0015s0174 Marchantia polymorpha HOM05D006288 ORTHO05D007416 8.4e-21 104.0 102 50.0
Thhalv10005135m.g Eutrema salsugineum HOM05D006288 ORTHO05D007416 1.4e-20 103.2 74 68.9
CARHR287980 Cardamine hirsuta HOM05D006288 ORTHO05D007416 3.2e-20 102.1 108 51.9
Eucgr.K01979 Eucalyptus grandis HOM05D006288 ORTHO05D007416 3.2e-20 102.1 90 67.8
AT5G49550 Arabidopsis thaliana HOM05D006288 ORTHO05D007416 5.4e-20 101.3 72 69.4
Sp2g19860 Schrenkiella parvula HOM05D006288 ORTHO05D007416 9.3e-20 100.5 71 69.0
A09p04890 Brassica napus HOM05D006288 ORTHO05D007416 1.2e-19 100.1 73 68.5
BraA09t36127Z Brassica rapa HOM05D006288 ORTHO05D007416 1.2e-19 100.1 73 68.5
BcaC04g23731 Brassica carinata HOM05D006288 ORTHO05D007416 2.1e-19 99.4 71 69.0
C09p05280 Brassica napus HOM05D006288 ORTHO05D007416 2.1e-19 99.4 71 69.0
FvH4_6g24710 Fragaria vesca HOM05D006288 ORTHO05D007416 2.1e-19 99.4 59 81.4
FAN14G4004 Fragaria x ananassa HOM05D006288 ORTHO05D007416 2.1e-19 99.4 59 81.4
AL954U10010 Arabidopsis lyrata HOM05D006288 ORTHO05D007416 2.7e-19 99.0 72 68.1
BcaB04g19620 Brassica carinata HOM05D006288 ORTHO05D007416 3.5e-19 98.6 73 67.1
AL8G23340 Arabidopsis lyrata HOM05D006288 ORTHO05D007416 4.6e-19 98.2 112 47.3
AagrBONN_evm.TU.Sc2ySwM_344.2644 Anthoceros agrestis HOM05D006288 ORTHO05D007416 6.0e-19 97.8 106 47.2
Pp3c21_3840 Physcomitrium patens HOM05D006288 ORTHO05D007416 1.9e-17 92.8 102 49.0
SHI46878 Sapria himalayana HOM05D006288 ORTHO05D007416 2.8e-16 89.0 72 55.6
SMO358G0122 Selaginella moellendorffii HOM05D006288 ORTHO05D007416 9.0e-15 84.0 97 43.3
Psat6g174640 Pisum sativum HOM05D006288 ORTHO05D007416 5.4e-12 74.7 62 62.9
Haze_03283 Corylus avellana HOM05D002280 ORTHO05D002322 7.9e-11 70.9 43 83.7
FAN03G1360 Fragaria x ananassa HOM05D006288 ORTHO05D007416 2.5e-09 65.9 55 58.2
FAN06G1951 Fragaria x ananassa HOM05D006288 ORTHO05D007416 6.9e-07 57.8 102 37.3


User provided reference genes

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