Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0028074 Camellia sinensis var. sinensis HOM05D005523 ORTHO05D026295 1.6e-97 359.4 173 100.0
CSS0023178 Camellia sinensis var. sinensis HOM05D005523 ORTHO05D007089 5.2e-93 344.4 184 92.4
CSS0024141 Camellia sinensis var. sinensis HOM05D005523 ORTHO05D007089 1.9e-79 299.3 213 74.2
CSS0004547 Camellia sinensis var. sinensis HOM05D005523 ORTHO05D007089 4.2e-74 281.6 199 75.4
Lj6A778G61 Lonicera japonica HOM05D005523 ORTHO05D007089 8.5e-27 124.4 111 55.9
Rhsim09G0126700 Rhododendron simsii HOM05D005523 ORTHO05D007089 1.9e-26 123.2 115 53.0
DCAR_026677 Daucus carota HOM05D005523 ORTHO05D007089 3.2e-26 122.5 113 54.9
Potri.010G157700 Populus trichocarpa HOM05D005523 ORTHO05D007089 1.6e-25 120.2 110 51.8
GSVIVG01012228001 Vitis vinifera HOM05D005523 ORTHO05D007089 2.1e-25 119.8 110 53.6
Rhsim02G0238300 Rhododendron simsii HOM05D005523 ORTHO05D007089 2.7e-25 119.4 110 54.5
TWI79G0260 Tripterygium wilfordii HOM05D005523 ORTHO05D007089 3.6e-25 119.0 110 51.8
vmacro10430 Vaccinium macrocarpon HOM05D005523 ORTHO05D007089 4.7e-25 118.6 107 56.1
Manes.05G109800 Manihot esculenta HOM05D005523 ORTHO05D007089 1.8e-24 116.7 110 51.8
QL03p074024 Quercus lobata HOM05D005523 ORTHO05D007089 3.0e-24 115.9 114 50.0
QL03p074443 Quercus lobata HOM05D005523 ORTHO05D007089 3.0e-24 115.9 114 50.0
Haze_11899 Corylus avellana HOM05D005523 ORTHO05D007089 6.7e-24 114.8 114 51.8
Sc14g0007970 Simmondsia chinensis HOM05D005523 ORTHO05D007089 4.4e-23 112.1 110 48.2
CANSAT64G1787 Cannabis sativa HOM05D005523 ORTHO05D007089 2.2e-22 109.8 110 47.3
Nn4g23450 Nelumbo nucifera HOM05D005523 ORTHO05D007089 2.2e-22 109.8 109 50.5
Cc03_g11190 Coffea canephora HOM05D005523 ORTHO05D007089 3.7e-22 109.0 110 50.0
Cc11_g11910 Coffea canephora HOM05D005523 ORTHO05D007089 4.8e-22 108.6 110 50.0
Cfa008872 Carpinus fangiana HOM05D005523 ORTHO05D007089 6.3e-22 108.2 114 48.2
ECA234G2689 Erigeron canadensis HOM05D005523 ORTHO05D007089 6.3e-22 108.2 110 50.0
SalBow2G2481 Salvia bowleyana HOM05D005523 ORTHO05D007089 6.3e-22 108.2 110 54.5
CiPaw.05G124500 Carya illinoinensis HOM05D005523 ORTHO05D007089 1.8e-21 106.7 131 44.3
Migut.L01183 Erythranthe guttata HOM05D005523 ORTHO05D007089 3.1e-21 105.9 103 54.4
PGR119G1690 Punica granatum HOM05D005523 ORTHO05D007089 4.1e-21 105.5 111 46.8
Lsat_1_v5_gn_4_11761 Lactuca sativa HOM05D005523 ORTHO05D007089 5.3e-21 105.1 108 50.0
ATR0177G042 Amborella trichopoda HOM05D005523 ORTHO05D007089 1.6e-20 103.6 94 54.3
SGA_v2.0_scaffold16G07795 Striga asiatica HOM05D005523 ORTHO05D007089 1.6e-20 103.6 106 49.1
unitig_26.g10286 Utricularia gibba HOM05D005523 ORTHO05D007089 3.5e-20 102.4 116 49.1
Thecc.02G329500 Theobroma cacao HOM05D005523 ORTHO05D007089 4.5e-20 102.1 80 53.8
PSO478G5042 Papaver somniferum HOM05D005523 ORTHO05D007089 7.7e-20 101.3 115 46.1
COL.COLO4_27873 Corchorus olitorius HOM05D005523 ORTHO05D007089 1.3e-19 100.5 110 46.4
HanXRQChr17g0552771 Helianthus annuus HOM05D005523 ORTHO05D007089 1.3e-19 100.5 115 45.2
arahy.Tifrunner.gnm1.ann1.5T11RT Arachis hypogaea HOM05D005523 ORTHO05D007089 2.2e-19 99.8 111 45.0
Ciclev10033727m.g Citrus clementina HOM05D005523 ORTHO05D007089 2.9e-19 99.4 109 45.9
Nitab4.5_0007061g0020 Nicotiana tabacum HOM05D005523 ORTHO05D007089 3.8e-19 99.0 122 45.9
Nitab4.5_0000231g0170 Nicotiana tabacum HOM05D005523 ORTHO05D007089 6.5e-19 98.2 129 43.4
Solyc05g012200.3 Solanum lycopersicum HOM05D005523 ORTHO05D007089 6.5e-19 98.2 110 48.2
PGSC0003DMG400028314 Solanum tuberosum HOM05D005523 ORTHO05D007089 6.5e-19 98.2 110 48.2
Aqoxy3G00520 Aquilegia oxysepala HOM05D005523 ORTHO05D007089 8.5e-19 97.8 115 46.1
Peaxi162Scf00175g00035 Petunia axillaris HOM05D005523 ORTHO05D007089 8.5e-19 97.8 111 48.6
arahy.Tifrunner.gnm1.ann1.1A68HA Arachis hypogaea HOM05D005523 ORTHO05D007089 1.1e-18 97.4 110 44.5
PSO017G3752 Papaver somniferum HOM05D005523 ORTHO05D007089 1.1e-18 97.4 115 44.3
Sopen05g007030 Solanum pennellii HOM05D005523 ORTHO05D007089 1.1e-18 97.4 110 48.2
Psat7g133840 Pisum sativum HOM05D005523 ORTHO05D007089 1.5e-18 97.1 112 47.3
Oeu021803.1 Olea europaea HOM05D005523 ORTHO05D007089 2.5e-18 96.3 80 55.0
Oeu021804.1 Olea europaea HOM05D005523 ORTHO05D007089 2.5e-18 96.3 80 55.0
CDE10G0400 Ceratophyllum demersum HOM05D005523 ORTHO05D007089 4.2e-18 95.5 110 46.4
Gohir.D12G164000 Gossypium hirsutum HOM05D005523 ORTHO05D007089 4.2e-18 95.5 105 44.8
Sed0024899 Sechium edule HOM05D005523 ORTHO05D007089 7.2e-18 94.7 111 40.5
SEGI_10872 Sequoiadendron giganteum HOM05D005523 ORTHO05D007089 7.2e-18 94.7 107 43.9
Duzib251G0966 Durio zibethinus HOM05D005523 ORTHO05D007089 9.4e-18 94.4 105 48.6
EL10Ac6g15006 Beta vulgaris HOM05D005523 ORTHO05D007089 1.2e-17 94.0 105 42.9
Medtr4g083180 Medicago truncatula HOM05D005523 ORTHO05D007089 1.2e-17 94.0 104 49.0
MBI19_g25293_MAGBIO Magnolia biondii HOM05D005523 ORTHO05D007089 1.6e-17 93.6 84 54.8
Lj4g0005251 Lotus japonicus HOM05D005523 ORTHO05D007089 2.1e-17 93.2 136 40.4
VMungo0251G1186 Vigna mungo HOM05D005523 ORTHO05D007089 2.1e-17 93.2 102 49.0
Gorai.008G176600 Gossypium raimondii HOM05D005523 ORTHO05D007089 2.7e-17 92.8 105 43.8
Glyma.20G025400 Glycine max HOM05D005523 ORTHO05D007089 3.6e-17 92.4 110 43.6
Lalb_Chr05g0219911 Lupinus albus HOM05D005523 ORTHO05D007089 3.6e-17 92.4 96 51.0
Phvul.002G101900 Phaseolus vulgaris HOM05D005523 ORTHO05D007089 3.6e-17 92.4 110 45.5
TPR.G34024 Trifolium pratense HOM05D005523 ORTHO05D007089 4.7e-17 92.0 104 48.1
AUR62003091 Chenopodium quinoa HOM05D005523 ORTHO05D007089 8.0e-17 91.3 102 45.1
CAN.G707.6 Capsicum annuum HOM05D005523 ORTHO05D007089 1.0e-16 90.9 110 45.5
FvH4_4g29880 Fragaria vesca HOM05D005523 ORTHO05D007089 1.4e-16 90.5 118 42.4
AUR62007908 Chenopodium quinoa HOM05D005523 ORTHO05D007089 3.0e-16 89.4 102 44.1
Ca_18798_v3 Cicer arietinum L. HOM05D005523 ORTHO05D007089 3.0e-16 89.4 82 53.7
FAN12G2921 Fragaria x ananassa HOM05D005523 ORTHO05D007089 3.0e-16 89.4 118 42.4
Zm00001eb029510 Zea mays HOM05D005523 ORTHO05D007089 4.0e-16 89.0 101 47.5
FAN22G0589 Fragaria x ananassa HOM05D005523 ORTHO05D007089 6.8e-16 88.2 118 41.5
CsaV3_5G033360 Cucumis sativus L. HOM05D005523 ORTHO05D007089 2.6e-15 86.3 111 37.8
Prupe.1G288300 Prunus persica HOM05D005523 ORTHO05D007089 2.6e-15 86.3 97 45.4
HPP92_001825 Vanilla planifolia HOM05D005523 ORTHO05D007089 2.6e-15 86.3 106 43.4
FAN07G2138 Fragaria x ananassa HOM05D005523 ORTHO05D007089 5.7e-15 85.1 118 42.4
FAN17G1793 Fragaria x ananassa HOM05D005523 ORTHO05D007089 5.7e-15 85.1 118 40.7
MD13G1061700 Malus domestica HOM05D005523 ORTHO05D007089 5.7e-15 85.1 110 40.9
MELO3C012156.2 Cucumis melo HOM05D005523 ORTHO05D007089 9.8e-15 84.3 110 39.1
CARHR145990 Cardamine hirsuta HOM05D005523 ORTHO05D007089 2.2e-14 83.2 120 39.2
RcHm_v2.0_Chr4g0438141 Rosa chinensis HOM05D005523 ORTHO05D007089 2.2e-14 83.2 168 33.3
Hund25171 Selenicereus undatus HOM05D005523 ORTHO05D007089 2.2e-14 83.2 100 46.0
Sp2g14490 Schrenkiella parvula HOM05D005523 ORTHO05D007089 1.1e-13 80.9 114 39.5
THA.LOC104805203 Tarenaya hassleriana HOM05D005523 ORTHO05D007089 2.4e-13 79.7 114 40.4
MD16G1060200 Malus domestica HOM05D005523 ORTHO05D007089 4.1e-13 79.0 109 39.4
C07p34020 Brassica napus HOM05D005523 ORTHO05D007089 7.0e-13 78.2 114 39.5
BolC7t43916H Brassica oleracea HOM05D005523 ORTHO05D007089 7.0e-13 78.2 114 39.5
Aa31LG2G7010 Aethionema arabicum HOM05D005523 ORTHO05D007089 9.1e-13 77.8 118 39.0
CBR_g50115 Chara braunii HOM05D005523 ORTHO05D007089 9.1e-13 77.8 102 38.2
AT2G03667 Arabidopsis thaliana HOM05D005523 ORTHO05D007089 1.6e-12 77.0 108 38.9
BcaB07g30661 Brassica carinata HOM05D005523 ORTHO05D007089 2.0e-12 76.6 115 39.1
Thhalv10003838m.g Eutrema salsugineum HOM05D005523 ORTHO05D007089 2.0e-12 76.6 119 38.7
Cpa.g.sc1.132 Carica papaya HOM05D005523 ORTHO05D007089 2.7e-12 76.3 71 45.1
Carub.0005s0279 Capsella rubella HOM05D005523 ORTHO05D007089 4.5e-12 75.5 110 39.1
Atru.chr11.1618 Acer truncatum HOM05D005523 ORTHO05D007089 7.7e-12 74.7 114 39.5
AL5G13440 Arabidopsis lyrata HOM05D005523 ORTHO05D007089 1.0e-11 74.3 106 38.7
Pp3c13_5080 Physcomitrium patens HOM05D005523 ORTHO05D007089 1.7e-11 73.6 111 35.1
A06p43010 Brassica napus HOM05D005523 ORTHO05D007089 2.2e-11 73.2 111 36.9
AagrBONN_evm.TU.Sc2ySwM_228.676 Anthoceros agrestis HOM05D005523 ORTHO05D007089 5.0e-11 72.0 102 42.2
CiPaw.04G124200 Carya illinoinensis HOM05D005523 ORTHO05D007089 2.3e-08 63.2 111 36.9
ClCG05G023660 Citrullus lanatus HOM05D005523 ORTHO05D007089 2.3e-08 63.2 67 44.8
SMO364G0955 Selaginella moellendorffii HOM05D005523 ORTHO05D007089 5.2e-08 62.0 80 42.5
Os12g0574900 Oryza sativa ssp. japonica HOM05D005523 ORTHO05D007089 8.8e-08 61.2 78 41.0
TAR374G1311 Trochodendron aralioides HOM05D005523 ORTHO05D007089 2.0e-07 60.1 57 49.1
Actinidia11693 Actinidia chinensis HOM05D005523 ORTHO05D026295 8.3e-06 54.7 37 62.2


User provided reference genes

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