Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0028068 Camellia sinensis var. sinensis HOM05D006715 ORTHO05D008345 6.3e-154 547.4 266 100.0
CSS0020422 Camellia sinensis var. sinensis HOM05D006715 ORTHO05D008345 5.0e-111 404.8 318 68.9
Actinidia17784 Actinidia chinensis HOM05D006715 ORTHO05D008345 1.1e-81 307.4 282 59.6
Rhsim05G0181200 Rhododendron simsii HOM05D006715 ORTHO05D008345 8.6e-79 297.7 303 55.1
vmacro20039 Vaccinium macrocarpon HOM05D006715 ORTHO05D008345 1.8e-76 290.0 284 56.0
Haze_17767 Corylus avellana HOM05D006715 ORTHO05D008345 9.6e-54 214.5 257 48.6
Cfa018312 Carpinus fangiana HOM05D006715 ORTHO05D008345 6.2e-53 211.8 309 44.0
Lj7A376T34 Lonicera japonica HOM05D006715 ORTHO05D008345 6.9e-52 208.4 255 45.9
FvH4_2g13430 Fragaria vesca HOM05D006715 ORTHO05D008345 1.2e-48 197.6 259 45.9
QL09p013340 Quercus lobata HOM05D006715 ORTHO05D008345 2.1e-48 196.8 256 46.9
FAN24G1213 Fragaria x ananassa HOM05D006715 ORTHO05D008345 2.7e-48 196.4 232 48.7
CiPaw.16G011000 Carya illinoinensis HOM05D006715 ORTHO05D008345 6.0e-48 195.3 235 46.8
COL.COLO4_29857 Corchorus olitorius HOM05D006715 ORTHO05D008345 7.9e-48 194.9 255 43.9
GSVIVG01034549001 Vitis vinifera HOM05D006715 ORTHO05D008345 1.3e-47 194.1 245 44.9
Prupe.8G033600 Prunus persica HOM05D006715 ORTHO05D008345 1.8e-47 193.7 294 41.8
Duzib093G1010 Durio zibethinus HOM05D006715 ORTHO05D008345 5.1e-47 192.2 226 45.1
Cpa.g.sc1027.1 Carica papaya HOM05D006715 ORTHO05D008345 9.6e-46 188.0 227 44.5
TAR381G1273 Trochodendron aralioides HOM05D006715 ORTHO05D008345 6.2e-45 185.3 256 40.6
RcHm_v2.0_Chr6g0275051 Rosa chinensis HOM05D006715 ORTHO05D008345 1.4e-44 184.1 264 43.2
Thecc.08G154500 Theobroma cacao HOM05D006715 ORTHO05D008345 4.0e-44 182.6 224 44.2
MD05G1027900 Malus domestica HOM05D006715 ORTHO05D008345 1.5e-43 180.6 289 38.1
RcHm_v2.0_Chr5g0050861 Rosa chinensis HOM05D006715 ORTHO05D008345 2.0e-43 180.3 264 42.4
Peaxi162Scf00599g00121 Petunia axillaris HOM05D006715 ORTHO05D008345 4.5e-43 179.1 279 40.5
CANSAT25G3857 Cannabis sativa HOM05D006715 ORTHO05D008345 5.8e-43 178.7 315 36.8
TAR381G1110 Trochodendron aralioides HOM05D006715 ORTHO05D008345 8.4e-42 174.9 256 39.8
Ciclev10000601m.g Citrus clementina HOM05D006715 ORTHO05D008345 4.2e-41 172.6 226 45.1
TPR.G23114 Trifolium pratense HOM05D006715 ORTHO05D008345 4.2e-41 172.6 231 40.7
Lalb_Chr01g0009561 Lupinus albus HOM05D006715 ORTHO05D008345 7.1e-41 171.8 272 40.1
PGSC0003DMG400024094 Solanum tuberosum HOM05D006715 ORTHO05D008345 1.6e-40 170.6 255 40.4
Sopen04g027550 Solanum pennellii HOM05D006715 ORTHO05D008345 2.7e-40 169.9 285 38.2
Atru.chr13.2084 Acer truncatum HOM05D006715 ORTHO05D008345 4.6e-40 169.1 259 40.9
TWI34G0194 Tripterygium wilfordii HOM05D006715 ORTHO05D008345 7.9e-40 168.3 246 40.7
Nitab4.5_0002764g0020 Nicotiana tabacum HOM05D006715 ORTHO05D008345 1.0e-39 167.9 254 40.6
Glyma.16G166500 Glycine max HOM05D006715 ORTHO05D008345 1.3e-39 167.5 256 41.0
Gohir.A06G112504 Gossypium hirsutum HOM05D006715 ORTHO05D008345 1.3e-39 167.5 224 42.9
Potri.005G193500 Populus trichocarpa HOM05D006715 ORTHO05D008345 2.3e-39 166.8 256 41.4
MSTRG.24217 Avicennia marina HOM05D006715 ORTHO05D008345 3.9e-39 166.0 250 41.2
Manes.02G180601 Manihot esculenta HOM05D006715 ORTHO05D008345 5.1e-39 165.6 223 43.0
DCAR_010095 Daucus carota HOM05D006715 ORTHO05D008345 1.1e-38 164.5 254 41.3
Nitab4.5_0001187g0100 Nicotiana tabacum HOM05D006715 ORTHO05D008345 1.1e-38 164.5 231 43.7
Lj2g0009741 Lotus japonicus HOM05D006715 ORTHO05D008345 2.5e-38 163.3 250 40.0
arahy.Tifrunner.gnm1.ann1.SG7PGU Arachis hypogaea HOM05D006715 ORTHO05D008345 3.3e-38 162.9 251 41.4
Potri.005G193701 Populus trichocarpa HOM05D006715 ORTHO05D008345 3.3e-38 162.9 230 42.2
CAN.G1215.10 Capsicum annuum HOM05D006715 ORTHO05D008345 4.3e-38 162.5 253 40.3
PSO675G4790 Papaver somniferum HOM05D006715 ORTHO05D008345 4.3e-38 162.5 240 41.7
Gorai.010G134600 Gossypium raimondii HOM05D006715 ORTHO05D008345 5.7e-38 162.2 224 42.0
Phvul.004G094200 Phaseolus vulgaris HOM05D006715 ORTHO05D008345 7.4e-38 161.8 231 42.0
arahy.Tifrunner.gnm1.ann1.6MC3QX Arachis hypogaea HOM05D006715 ORTHO05D008345 2.2e-37 160.2 251 41.4
Medtr2g045070 Medicago truncatula HOM05D006715 ORTHO05D008345 2.8e-37 159.8 226 41.6
FAN27G2814 Fragaria x ananassa HOM05D006715 ORTHO05D008345 4.8e-37 159.1 200 46.5
Psat1g102000 Pisum sativum HOM05D006715 ORTHO05D008345 6.3e-37 158.7 265 39.6
Hund26691 Selenicereus undatus HOM05D006715 ORTHO05D008345 1.1e-36 157.9 229 44.1
VMungo0464G1764 Vigna mungo HOM05D006715 ORTHO05D008345 5.3e-36 155.6 238 40.3
SGA_v2.0_scaffold25G11186 Striga asiatica HOM05D006715 ORTHO05D008345 1.2e-35 154.5 281 35.2
Dinv41067 Davidia involucrata HOM05D006715 ORTHO05D008345 1.5e-35 154.1 131 64.9
Nn5g28769 Nelumbo nucifera HOM05D006715 ORTHO05D008345 2.0e-35 153.7 227 40.5
ClCG08G002210 Citrullus lanatus HOM05D006715 ORTHO05D008345 7.6e-35 151.8 234 41.9
Migut.N03207 Erythranthe guttata HOM05D006715 ORTHO05D008345 1.9e-33 147.1 249 37.8
Sed0009104 Sechium edule HOM05D006715 ORTHO05D008345 2.7e-32 143.3 262 39.7
MELO3C025024.2 Cucumis melo HOM05D006715 ORTHO05D008345 1.0e-31 141.4 260 40.4
Eucgr.F02698 Eucalyptus grandis HOM05D006715 ORTHO05D008345 5.1e-31 139.0 246 35.4
Lsat_1_v5_gn_9_41180 Lactuca sativa HOM05D006715 ORTHO05D008345 1.3e-29 134.4 226 38.5
AUR62026687 Chenopodium quinoa HOM05D006715 ORTHO05D008345 6.3e-29 132.1 243 38.7
PGR042G1662 Punica granatum HOM05D006715 ORTHO05D008345 2.4e-28 130.2 220 38.6
Aqoxy5G00857 Aquilegia oxysepala HOM05D006715 ORTHO05D008345 9.1e-28 128.3 232 37.1
AUR62040600 Chenopodium quinoa HOM05D006715 ORTHO05D008345 1.5e-27 127.5 251 36.7
EL10Ac1g01568 Beta vulgaris HOM05D006715 ORTHO05D008345 1.0e-26 124.8 236 36.9
Glyma.16G166333 Glycine max HOM05D006715 ORTHO05D008345 1.1e-25 121.3 182 40.1
Lj2g0026984 Lotus japonicus HOM05D006715 ORTHO05D008345 1.1e-25 121.3 129 55.0
THA.LOC104804670 Tarenaya hassleriana HOM05D006715 ORTHO05D008345 1.1e-25 121.3 227 33.0
Ca_26954_v3 Cicer arietinum L. HOM05D006715 ORTHO05D008345 1.9e-25 120.6 118 57.6
ECA232G1953 Erigeron canadensis HOM05D006715 ORTHO05D008345 1.9e-25 120.6 229 35.4
unitig_21.g20147 Utricularia gibba HOM05D006715 ORTHO05D008345 7.2e-25 118.6 245 32.2
Thhalv10003905m.g Eutrema salsugineum HOM05D006715 ORTHO05D008345 2.1e-24 117.1 235 33.2
CsaV3_6G002600 Cucumis sativus L. HOM05D006715 ORTHO05D008345 3.0e-23 113.2 118 53.4
Aa31LG6G9940 Aethionema arabicum HOM05D006715 ORTHO05D008345 3.9e-23 112.8 214 34.6
Sp1g32410 Schrenkiella parvula HOM05D006715 ORTHO05D008345 1.1e-22 111.3 215 34.0
Carub.0001s3453 Capsella rubella HOM05D006715 ORTHO05D008345 5.7e-22 109.0 219 32.4
AL1G51600 Arabidopsis lyrata HOM05D006715 ORTHO05D008345 4.8e-21 105.9 215 32.1
CDE12G0089 Ceratophyllum demersum HOM05D006715 ORTHO05D008345 1.4e-20 104.4 222 31.5
HPP92_009297 Vanilla planifolia HOM05D006715 ORTHO05D008345 1.4e-20 104.4 237 30.0
ATR0820G173 Amborella trichopoda HOM05D006715 ORTHO05D008345 6.9e-20 102.1 241 32.8
SalBow6G6609 Salvia bowleyana HOM05D006715 ORTHO05D008345 2.0e-19 100.5 228 32.9
SHI09071 Sapria himalayana HOM05D006715 ORTHO05D008345 5.9e-19 99.0 243 30.9
Zm00001eb083170 Zea mays HOM05D006715 ORTHO05D008345 5.9e-19 99.0 214 32.2
AT1G43245 Arabidopsis thaliana HOM05D006715 ORTHO05D008345 7.7e-19 98.6 208 32.2
HanXRQChr11g0320291 Helianthus annuus HOM05D006715 ORTHO05D008345 8.5e-18 95.1 217 35.5
C09p00980 Brassica napus HOM05D006715 ORTHO05D008345 1.9e-17 94.0 218 31.2
BcaC04g24108 Brassica carinata HOM05D006715 ORTHO05D008345 3.2e-17 93.2 218 30.7
BolC9t53031H Brassica oleracea HOM05D006715 ORTHO05D008345 3.2e-17 93.2 218 30.7
Os04g0423600 Oryza sativa ssp. japonica HOM05D006715 ORTHO05D008345 4.2e-17 92.8 237 30.8
Gohir.1Z049355 Gossypium hirsutum HOM05D006715 ORTHO05D008345 3.6e-16 89.7 135 41.5
BcaB01g02294 Brassica carinata HOM05D006715 ORTHO05D008345 6.1e-16 89.0 226 29.6
Gohir.D06G116900 Gossypium hirsutum HOM05D006715 ORTHO05D008345 6.1e-16 89.0 101 44.6
BraA09t35760Z Brassica rapa HOM05D006715 ORTHO05D008345 3.9e-15 86.3 223 30.0
A09p00880 Brassica napus HOM05D006715 ORTHO05D008345 6.7e-15 85.5 223 30.0
QL02p038810 Quercus lobata HOM05D006715 ORTHO05D008345 7.7e-11 72.0 100 46.0
CARHR035370 Cardamine hirsuta HOM05D006715 ORTHO05D008345 4.4e-06 56.2 79 36.7


User provided reference genes

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