Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0028044 Camellia sinensis var. sinensis HOM05D005308 ORTHO05D006494 4.5e-250 867.5 441 100.0
Dinv39406 Davidia involucrata HOM05D005308 ORTHO05D006494 2.3e-193 679.1 445 78.9
vmacro04517 Vaccinium macrocarpon HOM05D005308 ORTHO05D006494 2.2e-188 662.5 449 76.8
Hma1.2p1_0077F.1_g039700 Hydrangea macrophylla HOM05D005308 ORTHO05D006494 4.8e-183 644.8 450 74.4
RcHm_v2.0_Chr6g0300791 Rosa chinensis HOM05D005308 ORTHO05D006494 9.9e-181 637.1 444 73.0
Rhsim07G0237100 Rhododendron simsii HOM05D005308 ORTHO05D006494 1.1e-179 633.6 449 73.9
GSVIVG01009686001 Vitis vinifera HOM05D005308 ORTHO05D006494 1.1e-179 633.6 443 73.1
QL02p007937 Quercus lobata HOM05D005308 ORTHO05D006494 2.1e-178 629.4 442 71.5
Prupe.1G381500 Prunus persica HOM05D005308 ORTHO05D006494 2.7e-178 629.0 444 73.2
Atru.chr13.513 Acer truncatum HOM05D005308 ORTHO05D006494 3.0e-177 625.5 446 70.0
Atru.chr8.2603 Acer truncatum HOM05D005308 ORTHO05D006494 3.0e-177 625.5 446 70.0
FAN15G3722 Fragaria x ananassa HOM05D005308 ORTHO05D006494 1.1e-176 623.6 445 72.4
FvH4_2g39960 Fragaria vesca HOM05D005308 ORTHO05D006494 3.3e-176 622.1 445 71.7
FAN27G1201 Fragaria x ananassa HOM05D005308 ORTHO05D006494 4.3e-176 621.7 445 72.1
Ciclev10000534m.g Citrus clementina HOM05D005308 ORTHO05D006494 2.1e-175 619.4 445 70.3
Cfa018137 Carpinus fangiana HOM05D005308 ORTHO05D006494 1.4e-174 616.7 446 71.3
Sabra02G0199700 Salix brachista HOM05D005308 ORTHO05D006494 1.4e-174 616.7 444 71.2
Manes.05G161700 Manihot esculenta HOM05D005308 ORTHO05D006494 1.2e-173 613.6 443 70.4
CiPaw.15G075700 Carya illinoinensis HOM05D005308 ORTHO05D006494 1.0e-172 610.5 443 69.5
Haze_17987 Corylus avellana HOM05D005308 ORTHO05D006494 1.0e-172 610.5 446 70.9
Nitab4.5_0003783g0070 Nicotiana tabacum HOM05D005308 ORTHO05D006494 3.8e-172 608.6 443 70.9
Potri.002G262900 Populus trichocarpa HOM05D005308 ORTHO05D006494 4.9e-172 608.2 444 70.5
MD15G1030000 Malus domestica HOM05D005308 ORTHO05D006494 9.3e-171 604.0 445 70.6
Thecc.08G024400 Theobroma cacao HOM05D005308 ORTHO05D006494 9.3e-171 604.0 443 70.2
MD08G1033400 Malus domestica HOM05D005308 ORTHO05D006494 4.6e-170 601.7 445 69.9
Nitab4.5_0000110g0380 Nicotiana tabacum HOM05D005308 ORTHO05D006494 6.0e-170 601.3 443 70.2
Cc03_g06460 Coffea canephora HOM05D005308 ORTHO05D006494 1.8e-169 599.7 444 69.4
PGR031G2270 Punica granatum HOM05D005308 ORTHO05D006494 2.3e-169 599.4 442 69.7
Eucgr.F01908 Eucalyptus grandis HOM05D005308 ORTHO05D006494 8.7e-169 597.4 444 69.8
Glyma.14G076200 Glycine max HOM05D005308 ORTHO05D006494 1.1e-168 597.0 446 69.5
Lj4P784T41 Lonicera japonica HOM05D005308 ORTHO05D006494 1.5e-168 596.7 444 69.6
ClCG08G015210 Citrullus lanatus HOM05D005308 ORTHO05D006494 2.5e-168 595.9 443 67.9
ClCG08G015240 Citrullus lanatus HOM05D005308 ORTHO05D006494 2.5e-168 595.9 443 67.9
Lj5g0021582 Lotus japonicus HOM05D005308 ORTHO05D006494 1.3e-167 593.6 444 68.0
MELO3C010930.2 Cucumis melo HOM05D005308 ORTHO05D006494 3.7e-167 592.0 445 67.6
Sed0011840 Sechium edule HOM05D005308 ORTHO05D006494 2.4e-166 589.3 443 67.7
COL.COLO4_26340 Corchorus olitorius HOM05D005308 ORTHO05D006494 3.1e-166 589.0 445 70.1
PGSC0003DMG400005144 Solanum tuberosum HOM05D005308 ORTHO05D006494 6.9e-166 587.8 444 68.5
Duzib041G0136 Durio zibethinus HOM05D005308 ORTHO05D006494 1.5e-165 586.6 443 68.8
Potri.014G180900 Populus trichocarpa HOM05D005308 ORTHO05D006494 5.9e-165 584.7 444 69.1
Gorai.009G203600 Gossypium raimondii HOM05D005308 ORTHO05D006494 1.0e-164 583.9 510 62.2
Duzib093G0415 Durio zibethinus HOM05D005308 ORTHO05D006494 1.3e-164 583.6 443 68.6
CSS0027115 Camellia sinensis var. sinensis HOM05D005308 ORTHO05D006494 2.9e-164 582.4 426 72.5
CsaV3_2G028560 Cucumis sativus L. HOM05D005308 ORTHO05D006494 5.0e-164 581.6 443 66.8
Glyma.17G249600 Glycine max HOM05D005308 ORTHO05D006494 8.5e-164 580.9 450 67.6
Gohir.D05G198500 Gossypium hirsutum HOM05D005308 ORTHO05D006494 8.5e-164 580.9 510 62.0
Gorai.010G011100 Gossypium raimondii HOM05D005308 ORTHO05D006494 1.1e-163 580.5 445 68.8
Solyc04g080180.1 Solanum lycopersicum HOM05D005308 ORTHO05D006494 1.9e-163 579.7 444 68.2
AUR62032897 Chenopodium quinoa HOM05D005308 ORTHO05D006494 3.2e-163 578.9 432 67.8
EL10Ac9g23018 Beta vulgaris HOM05D005308 ORTHO05D006494 4.2e-163 578.6 432 68.5
Gohir.D06G008300 Gossypium hirsutum HOM05D005308 ORTHO05D006494 4.2e-163 578.6 445 68.8
Sc02g0006300 Simmondsia chinensis HOM05D005308 ORTHO05D006494 4.2e-163 578.6 442 67.4
Duzib116G0819 Durio zibethinus HOM05D005308 ORTHO05D006494 1.2e-162 577.0 442 68.6
CAN.G1126.42 Capsicum annuum HOM05D005308 ORTHO05D006494 2.7e-162 575.9 453 66.2
Gohir.A05G195300 Gossypium hirsutum HOM05D005308 ORTHO05D006494 3.6e-162 575.5 525 60.2
Gohir.A06G010900 Gossypium hirsutum HOM05D005308 ORTHO05D006494 4.6e-162 575.1 444 67.6
Lalb_Chr22g0355491 Lupinus albus HOM05D005308 ORTHO05D006494 1.4e-161 573.5 445 67.0
Sopen04g033770 Solanum pennellii HOM05D005308 ORTHO05D006494 3.9e-161 572.0 444 67.8
AUR62017754 Chenopodium quinoa HOM05D005308 ORTHO05D006494 5.1e-161 571.6 432 67.4
Sed0021548 Sechium edule HOM05D005308 ORTHO05D006494 1.1e-160 570.5 443 66.4
TWI73G1022 Tripterygium wilfordii HOM05D005308 ORTHO05D006494 2.5e-160 569.3 446 66.8
Phvul.001G015400 Phaseolus vulgaris HOM05D005308 ORTHO05D006494 3.3e-160 568.9 446 66.4
VMungo0647G0443 Vigna mungo HOM05D005308 ORTHO05D006494 1.3e-159 567.0 450 66.2
Medtr1g022045 Medicago truncatula HOM05D005308 ORTHO05D006494 3.7e-159 565.5 447 65.5
Ca_13346_v3 Cicer arietinum L. HOM05D005308 ORTHO05D006494 4.8e-159 565.1 446 65.7
CsaV3_2G028600 Cucumis sativus L. HOM05D005308 ORTHO05D006494 4.8e-159 565.1 443 64.8
Ah.01g011450 Amaranthus hybridus HOM05D005308 ORTHO05D006494 2.0e-157 559.7 445 65.6
MSTRG.11457 Avicennia marina HOM05D005308 ORTHO05D006494 1.0e-156 557.4 442 66.1
SalBow5G1122 Salvia bowleyana HOM05D005308 ORTHO05D006494 5.0e-156 555.1 443 64.3
Psat6g007480 Pisum sativum HOM05D005308 ORTHO05D006494 8.5e-156 554.3 446 63.9
Aqoxy3G02057 Aquilegia oxysepala HOM05D005308 ORTHO05D006494 4.2e-155 552.0 443 64.1
Oeu052497.1 Olea europaea HOM05D005308 ORTHO05D006494 5.5e-155 551.6 444 64.9
Peaxi162Scf00690g00113 Petunia axillaris HOM05D005308 ORTHO05D006494 2.7e-154 549.3 449 65.7
TPR.G29756 Trifolium pratense HOM05D005308 ORTHO05D006494 3.6e-154 548.9 452 63.1
Oeu016389.1 Olea europaea HOM05D005308 ORTHO05D006494 1.5e-152 543.5 444 64.6
THA.LOC104813841 Tarenaya hassleriana HOM05D005308 ORTHO05D006494 1.4e-147 526.9 446 63.2
ECA246G5303 Erigeron canadensis HOM05D005308 ORTHO05D006494 1.9e-147 526.6 453 60.9
MSTRG.23132 Avicennia marina HOM05D005308 ORTHO05D006494 8.0e-146 521.2 442 62.2
HanXRQChr05g0151851 Helianthus annuus HOM05D005308 ORTHO05D006494 3.0e-145 519.2 454 60.6
TAR376G0813 Trochodendron aralioides HOM05D005308 ORTHO05D006494 8.8e-145 517.7 373 70.2
DCAR_019524 Daucus carota HOM05D005308 ORTHO05D006494 5.7e-144 515.0 444 62.2
PSO782G4716 Papaver somniferum HOM05D005308 ORTHO05D006494 1.7e-143 513.5 502 56.8
PSO063G3485 Papaver somniferum HOM05D005308 ORTHO05D006494 7.0e-142 508.1 502 56.4
DCAR_020966 Daucus carota HOM05D005308 ORTHO05D006494 3.5e-141 505.8 398 65.8
Thhalv10018268m.g Eutrema salsugineum HOM05D005308 ORTHO05D006494 1.9e-139 500.0 452 59.5
Sp5g30270 Schrenkiella parvula HOM05D005308 ORTHO05D006494 1.2e-138 497.3 450 59.8
AL2G35040 Arabidopsis lyrata HOM05D005308 ORTHO05D006494 3.6e-138 495.7 450 60.2
CARHR068470 Cardamine hirsuta HOM05D005308 ORTHO05D006494 4.7e-138 495.4 448 59.2
Migut.I00006 Erythranthe guttata HOM05D005308 ORTHO05D006494 6.1e-138 495.0 455 59.1
Aa31LG7G4080 Aethionema arabicum HOM05D005308 ORTHO05D006494 8.0e-138 494.6 449 57.7
Carub.0002s2195 Capsella rubella HOM05D005308 ORTHO05D006494 1.0e-137 494.2 442 60.4
Nn3g19273 Nelumbo nucifera HOM05D005308 ORTHO05D006494 1.7e-135 486.9 371 65.5
AT1G75140 Arabidopsis thaliana HOM05D005308 ORTHO05D006494 1.2e-133 480.7 450 59.8
THA.LOC104806374 Tarenaya hassleriana HOM05D005308 ORTHO05D006494 1.2e-133 480.7 445 58.0
CARHR019960 Cardamine hirsuta HOM05D005308 ORTHO05D006494 1.3e-132 477.2 450 56.2
CDE11G0691 Ceratophyllum demersum HOM05D005308 ORTHO05D006494 4.2e-131 472.2 440 58.4
AT1G19370 Arabidopsis thaliana HOM05D005308 ORTHO05D006494 9.4e-131 471.1 450 55.3
Carub.0001s1896 Capsella rubella HOM05D005308 ORTHO05D006494 1.2e-130 470.7 451 55.9
AL1G31960 Arabidopsis lyrata HOM05D005308 ORTHO05D006494 2.7e-130 469.5 450 55.6
BraA06t24665Z Brassica rapa HOM05D005308 ORTHO05D006494 2.7e-130 469.5 451 55.0
BolC5t30482H Brassica oleracea HOM05D005308 ORTHO05D006494 3.6e-130 469.2 451 54.8
A06p15530 Brassica napus HOM05D005308 ORTHO05D006494 1.0e-129 467.6 451 54.8
MBI04_g27271_MAGBIO Magnolia biondii HOM05D005308 ORTHO05D006494 1.0e-129 467.6 440 56.8
BcaB07g31957 Brassica carinata HOM05D005308 ORTHO05D006494 1.5e-128 463.8 454 54.8
Sp1g17280 Schrenkiella parvula HOM05D005308 ORTHO05D006494 2.8e-127 459.5 445 53.7
BcaB02g07009 Brassica carinata HOM05D005308 ORTHO05D006494 8.3e-127 458.0 446 57.4
BolC6t38403H Brassica oleracea HOM05D005308 ORTHO05D006494 3.1e-126 456.1 450 56.9
BcaB02g06995 Brassica carinata HOM05D005308 ORTHO05D006494 1.3e-124 450.7 449 56.1
C06p32820 Brassica napus HOM05D005308 ORTHO05D006494 5.0e-124 448.7 449 55.9
A07p29040 Brassica napus HOM05D005308 ORTHO05D006494 2.5e-123 446.4 442 55.9
Lsat_1_v5_gn_5_29021 Lactuca sativa HOM05D005308 ORTHO05D006494 3.3e-123 446.0 367 60.5
BraA07t30544Z Brassica rapa HOM05D005308 ORTHO05D006494 7.2e-123 444.9 442 55.7
Aa31LG4G5330 Aethionema arabicum HOM05D005308 ORTHO05D006494 7.5e-120 434.9 422 55.2
Thhalv10009294m.g Eutrema salsugineum HOM05D005308 ORTHO05D006494 1.5e-115 420.6 448 52.2
SGA_v2.0_scaffold90G27910 Striga asiatica HOM05D005308 ORTHO05D006494 2.5e-115 419.9 462 50.9
SEGI_39092 Sequoiadendron giganteum HOM05D005308 ORTHO05D006494 7.3e-115 418.3 477 49.9
MBI04_g21134_MAGBIO Magnolia biondii HOM05D005308 ORTHO05D006494 3.7e-111 406.0 441 51.5
ATR0829G103 Amborella trichopoda HOM05D005308 ORTHO05D006494 4.3e-107 392.5 441 50.3
SHI08167 Sapria himalayana HOM05D005308 ORTHO05D006494 2.0e-104 383.6 358 56.1
Actinidia38015 Actinidia chinensis HOM05D005308 ORTHO05D006494 9.8e-104 381.3 409 54.8
Zm00001eb269050 Zea mays HOM05D005308 ORTHO05D006494 3.3e-99 366.3 475 42.9
Os06g0115200 Oryza sativa ssp. japonica HOM05D005308 ORTHO05D006494 6.8e-97 358.6 479 42.4
BcaNung07297 Brassica carinata HOM05D005308 ORTHO05D006494 7.3e-83 312.0 244 63.9
BcaNung07223 Brassica carinata HOM05D005308 ORTHO05D006494 1.6e-82 310.8 324 52.5
Pp3c20_21760 Physcomitrium patens HOM05D005308 ORTHO05D006494 4.5e-72 276.2 449 39.2
SMO361G0791 Selaginella moellendorffii HOM05D005308 ORTHO05D006494 2.1e-69 267.3 329 48.6
AagrBONN_evm.TU.Sc2ySwM_228.2792 Anthoceros agrestis HOM05D005308 ORTHO05D006494 7.9e-69 265.4 391 40.7
Pp3c10_23930 Physcomitrium patens HOM05D005308 ORTHO05D006494 1.0e-68 265.0 451 38.6
Mapoly0094s0054 Marchantia polymorpha HOM05D005308 ORTHO05D006494 3.3e-67 260.0 488 37.3
C05p17770 Brassica napus HOM05D005308 ORTHO05D006494 2.6e-64 250.4 178 67.4
unitig_0.g1436 Utricularia gibba HOM05D005308 ORTHO05D006494 9.7e-51 205.3 170 59.4
A07p29060 Brassica napus HOM05D005308 ORTHO05D006494 2.4e-49 200.7 125 76.0
unitig_0.g1437 Utricularia gibba HOM05D005308 ORTHO05D006494 3.1e-49 200.3 250 47.6
BcaB02g07002 Brassica carinata HOM05D005308 ORTHO05D006494 1.8e-44 184.5 139 67.6
SHI17314 Sapria himalayana HOM05D005308 ORTHO05D006494 2.0e-08 64.7 50 58.0


User provided reference genes

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