Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0028033 Camellia sinensis var. sinensis HOM05D007026 ORTHO05D008493 3.2e-162 575.1 307 100.0
vmacro21182 Vaccinium macrocarpon HOM05D007026 ORTHO05D008493 2.8e-81 306.2 313 63.6
Hma1.2p1_0293F.1_g116330 Hydrangea macrophylla HOM05D007026 ORTHO05D008493 4.6e-76 288.9 312 60.9
Dinv09365 Davidia involucrata HOM05D007026 ORTHO05D008493 6.9e-72 275.0 267 63.7
Rhsim01G0130400 Rhododendron simsii HOM05D007026 ORTHO05D008493 2.6e-71 273.1 235 67.7
Thecc.01G412700 Theobroma cacao HOM05D007026 ORTHO05D008493 1.4e-69 267.3 295 55.3
Dinv43456 Davidia involucrata HOM05D007026 ORTHO05D008493 4.2e-69 265.8 267 59.6
Manes.10G145400 Manihot esculenta HOM05D007026 ORTHO05D008493 7.9e-68 261.5 325 52.0
Cfa010744 Carpinus fangiana HOM05D007026 ORTHO05D008493 2.5e-66 256.5 298 54.4
Prupe.2G010600 Prunus persica HOM05D007026 ORTHO05D008493 6.3e-65 251.9 320 50.0
Nn2g15423 Nelumbo nucifera HOM05D007026 ORTHO05D008493 1.8e-64 250.4 327 54.1
Sabra09G0047000 Salix brachista HOM05D007026 ORTHO05D008493 1.8e-64 250.4 339 50.1
Actinidia21558 Actinidia chinensis HOM05D007026 ORTHO05D008493 2.0e-63 246.9 177 76.3
Potri.009G063700 Populus trichocarpa HOM05D007026 ORTHO05D008493 4.5e-63 245.7 339 50.1
TWI09G0295 Tripterygium wilfordii HOM05D007026 ORTHO05D008493 5.9e-63 245.4 259 56.4
TAR623G0027 Trochodendron aralioides HOM05D007026 ORTHO05D008493 5.9e-63 245.4 302 53.0
QL04p005492 Quercus lobata HOM05D007026 ORTHO05D008493 1.0e-62 244.6 307 53.7
Cc02_g27730 Coffea canephora HOM05D007026 ORTHO05D008493 1.3e-62 244.2 186 70.4
RcHm_v2.0_Chr1g0315651 Rosa chinensis HOM05D007026 ORTHO05D008493 1.3e-62 244.2 325 50.8
MD07G1007900 Malus domestica HOM05D007026 ORTHO05D008493 3.2e-61 239.6 233 60.9
Ciclev10032288m.g Citrus clementina HOM05D007026 ORTHO05D008493 9.4e-61 238.0 310 52.3
TAR623G1735 Trochodendron aralioides HOM05D007026 ORTHO05D008493 7.9e-60 235.0 302 51.7
FAN03G2284 Fragaria x ananassa HOM05D007026 ORTHO05D008493 1.8e-59 233.8 315 50.8
Haze_03229 Corylus avellana HOM05D007026 ORTHO05D008493 2.3e-59 233.4 327 49.8
Potri.001G269000 Populus trichocarpa HOM05D007026 ORTHO05D008493 1.1e-58 231.1 338 50.3
FAN06G1399 Fragaria x ananassa HOM05D007026 ORTHO05D008493 2.6e-58 229.9 305 51.8
FAN10G3680 Fragaria x ananassa HOM05D007026 ORTHO05D008493 4.4e-58 229.2 317 50.5
Atru.chr11.2644 Acer truncatum HOM05D007026 ORTHO05D008493 7.4e-58 228.4 258 56.2
arahy.Tifrunner.gnm1.ann1.VL74DI Arachis hypogaea HOM05D007026 ORTHO05D008493 1.3e-57 227.6 214 60.3
Duzib268G1513 Durio zibethinus HOM05D007026 ORTHO05D008493 1.3e-57 227.6 316 49.1
Medtr8g036520 Medicago truncatula HOM05D007026 ORTHO05D008493 1.3e-57 227.6 153 74.5
Cpa.g.sc245.8 Carica papaya HOM05D007026 ORTHO05D008493 3.1e-56 223.0 336 46.7
CANSAT80G1756 Cannabis sativa HOM05D007026 ORTHO05D008493 4.1e-56 222.6 272 50.7
PGR044G0728 Punica granatum HOM05D007026 ORTHO05D008493 4.1e-56 222.6 156 73.7
Lalb_Chr03g0033971 Lupinus albus HOM05D007026 ORTHO05D008493 1.2e-55 221.1 237 56.1
MSTRG.28077 Avicennia marina HOM05D007026 ORTHO05D008493 1.5e-55 220.7 327 48.6
DCAR_029660 Daucus carota HOM05D007026 ORTHO05D008493 1.5e-55 220.7 156 75.0
THA.LOC104826673 Tarenaya hassleriana HOM05D007026 ORTHO05D008493 2.0e-55 220.3 163 72.4
Gorai.004G173800 Gossypium raimondii HOM05D007026 ORTHO05D008493 2.6e-55 219.9 275 52.7
Gohir.D08G166400 Gossypium hirsutum HOM05D007026 ORTHO05D008493 4.5e-55 219.2 275 52.7
Actinidia20675 Actinidia chinensis HOM05D007026 ORTHO05D008493 5.9e-55 218.8 170 71.8
ClCG09G004280 Citrullus lanatus HOM05D007026 ORTHO05D008493 1.7e-54 217.2 145 76.6
Peaxi162Scf00428g00077 Petunia axillaris HOM05D007026 ORTHO05D008493 2.9e-54 216.5 299 49.8
Psat4g148320 Pisum sativum HOM05D007026 ORTHO05D008493 2.9e-54 216.5 262 53.4
CsaV3_7G031200 Cucumis sativus L. HOM05D007026 ORTHO05D008493 1.4e-53 214.2 304 47.0
PGSC0003DMG400024551 Solanum tuberosum HOM05D007026 ORTHO05D008493 1.4e-53 214.2 178 64.6
Sopen03g034460 Solanum pennellii HOM05D007026 ORTHO05D008493 1.2e-52 211.1 178 63.5
Nitab4.5_0002881g0080 Nicotiana tabacum HOM05D007026 ORTHO05D008493 2.1e-52 210.3 218 55.0
Lsat_1_v5_gn_1_108360 Lactuca sativa HOM05D007026 ORTHO05D008493 3.6e-52 209.5 274 52.2
Solyc03g115460.3 Solanum lycopersicum HOM05D007026 ORTHO05D008493 4.7e-52 209.1 178 62.9
MELO3C023538.2 Cucumis melo HOM05D007026 ORTHO05D008493 6.1e-52 208.8 307 46.9
Migut.A00762 Erythranthe guttata HOM05D007026 ORTHO05D008493 1.0e-51 208.0 150 73.3
Sc11g0009270 Simmondsia chinensis HOM05D007026 ORTHO05D008493 3.0e-51 206.5 209 55.5
SGA_v2.0_scaffold4G02258 Striga asiatica HOM05D007026 ORTHO05D008493 3.9e-51 206.1 278 48.6
Migut.N01474 Erythranthe guttata HOM05D007026 ORTHO05D008493 6.7e-51 205.3 141 76.6
ECA248G3415 Erigeron canadensis HOM05D007026 ORTHO05D008493 1.1e-50 204.5 273 48.0
Glyma.13G204000 Glycine max HOM05D007026 ORTHO05D008493 2.0e-50 203.8 150 70.7
MD02G1314200 Malus domestica HOM05D007026 ORTHO05D008493 2.0e-50 203.8 283 48.1
Lj3g0000564 Lotus japonicus HOM05D007026 ORTHO05D008493 1.3e-49 201.1 246 52.0
VMungo1127G0427 Vigna mungo HOM05D007026 ORTHO05D008493 1.3e-49 201.1 234 55.1
BcaC01g04025 Brassica carinata HOM05D007026 ORTHO05D008493 2.2e-49 200.3 245 51.0
BolC3t16854H Brassica oleracea HOM05D007026 ORTHO05D008493 2.2e-49 200.3 245 51.0
Lj7P569T60 Lonicera japonica HOM05D007026 ORTHO05D008493 2.8e-49 199.9 166 64.5
C03p45790 Brassica napus HOM05D007026 ORTHO05D008493 4.8e-49 199.1 245 51.0
Phvul.011G212500 Phaseolus vulgaris HOM05D007026 ORTHO05D008493 5.3e-48 195.7 216 53.7
unitig_0.g1578 Utricularia gibba HOM05D007026 ORTHO05D008493 7.0e-48 195.3 152 67.8
Aqoxy1G00217 Aquilegia oxysepala HOM05D007026 ORTHO05D008493 1.6e-47 194.1 301 44.2
Carub.0003s1200 Capsella rubella HOM05D007026 ORTHO05D008493 2.0e-47 193.7 180 61.7
PSO339G4493 Papaver somniferum HOM05D007026 ORTHO05D008493 2.6e-47 193.4 291 47.4
CARHR087160 Cardamine hirsuta HOM05D007026 ORTHO05D008493 4.5e-47 192.6 240 52.1
Thhalv10021417m.g Eutrema salsugineum HOM05D007026 ORTHO05D008493 1.0e-46 191.4 248 48.0
AL3G24320 Arabidopsis lyrata HOM05D007026 ORTHO05D008493 1.7e-46 190.7 180 61.7
A03p37740 Brassica napus HOM05D007026 ORTHO05D008493 1.7e-46 190.7 190 57.9
BraA03t12929Z Brassica rapa HOM05D007026 ORTHO05D008493 1.7e-46 190.7 190 57.9
Sp3g10790 Schrenkiella parvula HOM05D007026 ORTHO05D008493 2.2e-46 190.3 233 51.1
Sed0012425 Sechium edule HOM05D007026 ORTHO05D008493 2.5e-45 186.8 227 53.7
HanXRQChr06g0185391 Helianthus annuus HOM05D007026 ORTHO05D008493 3.2e-45 186.4 237 50.2
AT3G12650 Arabidopsis thaliana HOM05D007026 ORTHO05D008493 4.2e-45 186.0 179 60.9
Nitab4.5_0005198g0030 Nicotiana tabacum HOM05D007026 ORTHO05D008493 7.2e-45 185.3 160 65.0
A05p36850 Brassica napus HOM05D007026 ORTHO05D008493 1.2e-44 184.5 182 60.4
FvH4_7g00860 Fragaria vesca HOM05D007026 ORTHO05D008493 1.2e-44 184.5 268 49.3
ATR0605G064 Amborella trichopoda HOM05D007026 ORTHO05D008493 2.7e-44 183.3 213 51.2
BraA05t22486Z Brassica rapa HOM05D007026 ORTHO05D008493 2.7e-44 183.3 182 59.3
SHI26926 Sapria himalayana HOM05D007026 ORTHO05D008493 2.7e-44 183.3 244 51.6
COL.COLO4_23920 Corchorus olitorius HOM05D007026 ORTHO05D008493 6.1e-44 182.2 254 45.7
BcaB04g18713 Brassica carinata HOM05D007026 ORTHO05D008493 1.4e-43 181.0 258 46.9
Aa31LG3G20 Aethionema arabicum HOM05D007026 ORTHO05D008493 1.8e-43 180.6 177 59.3
MBI01_g27619_MAGBIO Magnolia biondii HOM05D007026 ORTHO05D008493 1.2e-42 177.9 137 67.2
BcaB06g25527 Brassica carinata HOM05D007026 ORTHO05D008493 2.6e-42 176.8 248 46.8
RcHm_v2.0_Chr1g0315521 Rosa chinensis HOM05D007026 ORTHO05D008493 2.5e-37 160.2 120 70.8
RcHm_v2.0_Chr1g0315191 Rosa chinensis HOM05D007026 ORTHO05D008493 5.5e-37 159.1 112 74.1
RcHm_v2.0_Chr1g0315371 Rosa chinensis HOM05D007026 ORTHO05D008493 1.2e-36 157.9 120 70.0
Gohir.A08G145400 Gossypium hirsutum HOM05D007026 ORTHO05D008493 1.8e-35 154.1 262 45.0
HPP92_022795 Vanilla planifolia HOM05D007026 ORTHO05D008493 8.8e-35 151.8 222 44.1
RcHm_v2.0_Chr1g0315011 Rosa chinensis HOM05D007026 ORTHO05D008493 1.2e-34 151.4 120 69.2
PSO384G4663 Papaver somniferum HOM05D007026 ORTHO05D008493 1.5e-34 151.0 256 44.9
BcaC05g29251 Brassica carinata HOM05D007026 ORTHO05D008493 3.7e-33 146.4 125 64.8
Eucgr.J01262 Eucalyptus grandis HOM05D007026 ORTHO05D008493 3.7e-33 146.4 116 64.7
EL10Ac2g04312 Beta vulgaris HOM05D007026 ORTHO05D008493 4.5e-31 139.4 215 42.3
BolC5t34196H Brassica oleracea HOM05D007026 ORTHO05D008493 5.9e-31 139.0 116 65.5
Os02g0718000 Oryza sativa ssp. japonica HOM05D007026 ORTHO05D008493 2.3e-27 127.1 164 47.6
Zm00001eb189290 Zea mays HOM05D007026 ORTHO05D008493 5.2e-27 125.9 174 44.8
BcaB08g35591 Brassica carinata HOM05D007026 ORTHO05D008493 2.0e-26 124.0 144 54.9
TPR.G17515 Trifolium pratense HOM05D007026 ORTHO05D008493 2.5e-21 107.1 253 36.8
AUR62009374 Chenopodium quinoa HOM05D007026 ORTHO05D008493 6.8e-19 99.0 119 42.0
Nitab4.5_0004511g0060 Nicotiana tabacum HOM05D007026 ORTHO05D008493 3.4e-18 96.7 67 70.1
AL7G43500 Arabidopsis lyrata HOM05D007026 ORTHO05D008493 6.4e-17 92.4 77 63.6
Pp3c2_10070 Physcomitrium patens HOM05D007026 ORTHO05D008493 1.2e-15 88.2 146 41.8
Nitab4.5_0000052g0150 Nicotiana tabacum HOM05D007026 ORTHO05D008493 3.6e-12 76.6 86 55.8
SMO147G0317 Selaginella moellendorffii HOM05D007026 ORTHO05D008493 1.4e-11 74.7 153 32.7
TPR.G28471 Trifolium pratense HOM05D007026 ORTHO05D008493 2.3e-11 73.9 145 42.8
C05p55310 Brassica napus HOM05D007026 ORTHO05D008493 4.4e-10 69.7 51 72.5
Mapoly0153s0019 Marchantia polymorpha HOM05D007026 ORTHO05D008493 1.1e-08 65.1 129 34.1
AUR62044089 Chenopodium quinoa HOM05D005782 ORTHO05D007436 6.0e-07 59.3 62 45.2
Aqoxy1G00218 Aquilegia oxysepala HOM05D000196 ORTHO05D000279 1.3e-06 58.2 255 28.2


User provided reference genes

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