Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0028019 Camellia sinensis var. sinensis HOM05D004969 ORTHO05D006085 1.0e-249 866.3 455 100.0
CSS0003565 Camellia sinensis var. sinensis HOM05D004969 ORTHO05D006085 2.6e-248 861.7 455 99.6
Actinidia23029 Actinidia chinensis HOM05D004969 ORTHO05D006085 7.1e-174 614.4 471 73.5
Dinv41780 Davidia involucrata HOM05D004969 ORTHO05D006085 2.5e-155 552.7 420 73.1
TAR381G0816 Trochodendron aralioides HOM05D004969 ORTHO05D006085 3.4e-152 542.3 455 68.4
GSVIVG01025999001 Vitis vinifera HOM05D004969 ORTHO05D006085 1.1e-150 537.3 453 67.5
Rhsim12G0005600 Rhododendron simsii HOM05D004969 ORTHO05D006085 1.8e-148 530.0 509 61.7
Migut.N03359 Erythranthe guttata HOM05D004969 ORTHO05D006085 1.5e-139 500.4 454 64.3
MSTRG.22462 Avicennia marina HOM05D004969 ORTHO05D006085 8.2e-138 494.6 457 63.5
Peaxi162Scf00391g00434 Petunia axillaris HOM05D004969 ORTHO05D006085 1.1e-137 494.2 456 62.9
Lj6g0017586 Lotus japonicus HOM05D004969 ORTHO05D006085 2.6e-136 489.6 456 63.4
Prupe.2G102700 Prunus persica HOM05D004969 ORTHO05D006085 2.6e-136 489.6 464 62.5
MBI06_g36481_MAGBIO Magnolia biondii HOM05D004969 ORTHO05D006085 1.5e-134 483.8 379 69.9
CAN.G2.7 Capsicum annuum HOM05D004969 ORTHO05D006085 3.6e-133 479.2 459 62.7
Nitab4.5_0003818g0050 Nicotiana tabacum HOM05D004969 ORTHO05D006085 6.1e-133 478.4 478 59.4
MD07G1079600 Malus domestica HOM05D004969 ORTHO05D006085 1.4e-132 477.2 463 60.3
Cc10_g11320 Coffea canephora HOM05D004969 ORTHO05D006085 1.2e-131 474.2 456 62.1
Nitab4.5_0000365g0150 Nicotiana tabacum HOM05D004969 ORTHO05D006085 2.0e-131 473.4 475 59.4
Solyc11g020300.2 Solanum lycopersicum HOM05D004969 ORTHO05D006085 2.6e-131 473.0 456 61.6
MD02G1235900 Malus domestica HOM05D004969 ORTHO05D006085 2.8e-130 469.5 408 65.4
HanXRQChr02g0036761 Helianthus annuus HOM05D004969 ORTHO05D006085 1.8e-129 466.8 464 59.1
Phvul.006G083300 Phaseolus vulgaris HOM05D004969 ORTHO05D006085 1.8e-129 466.8 452 61.9
Lalb_Chr18g0053961 Lupinus albus HOM05D004969 ORTHO05D006085 9.1e-129 464.5 460 61.5
Gorai.001G088300 Gossypium raimondii HOM05D004969 ORTHO05D006085 1.6e-128 463.8 408 67.2
Potri.004G087100 Populus trichocarpa HOM05D004969 ORTHO05D006085 1.6e-128 463.8 467 59.5
Gohir.A07G077900 Gossypium hirsutum HOM05D004969 ORTHO05D006085 1.3e-127 460.7 458 60.5
Aqoxy2G02250 Aquilegia oxysepala HOM05D004969 ORTHO05D006085 1.7e-127 460.3 466 58.4
VMungo0540G2242 Vigna mungo HOM05D004969 ORTHO05D006085 1.7e-127 460.3 452 60.8
PGR042G0690 Punica granatum HOM05D004969 ORTHO05D006085 2.9e-127 459.5 449 61.9
Duzib133G0278 Durio zibethinus HOM05D004969 ORTHO05D006085 5.0e-127 458.8 461 60.7
Lalb_Chr15g0085491 Lupinus albus HOM05D004969 ORTHO05D006085 6.5e-127 458.4 458 62.0
RcHm_v2.0_Chr1g0339281 Rosa chinensis HOM05D004969 ORTHO05D006085 6.5e-127 458.4 450 60.2
Cpa.g.sc116.57 Carica papaya HOM05D004969 ORTHO05D006085 8.5e-127 458.0 457 60.2
Sopen11g010590 Solanum pennellii HOM05D004969 ORTHO05D006085 1.1e-126 457.6 446 61.4
Glyma.11G202700 Glycine max HOM05D004969 ORTHO05D006085 7.2e-126 454.9 449 61.7
Manes.02G076800 Manihot esculenta HOM05D004969 ORTHO05D006085 7.2e-126 454.9 462 59.7
Cfa005580 Carpinus fangiana HOM05D004969 ORTHO05D006085 4.7e-125 452.2 399 65.2
Ca_15098_v3 Cicer arietinum L. HOM05D004969 ORTHO05D006085 6.1e-125 451.8 464 59.3
Potri.017G129800 Populus trichocarpa HOM05D004969 ORTHO05D006085 1.0e-124 451.1 456 58.8
Glyma.18G048200 Glycine max HOM05D004969 ORTHO05D006085 6.8e-124 448.4 454 61.7
TWI53G0342 Tripterygium wilfordii HOM05D004969 ORTHO05D006085 1.2e-123 447.6 471 57.5
Thecc.04G114600 Theobroma cacao HOM05D004969 ORTHO05D006085 2.0e-123 446.8 456 59.9
Duzib211G0057 Durio zibethinus HOM05D004969 ORTHO05D006085 5.7e-123 445.3 416 62.5
FvH4_7g07530 Fragaria vesca HOM05D004969 ORTHO05D006085 5.7e-123 445.3 386 63.7
HanXRQChr04g0102091 Helianthus annuus HOM05D004969 ORTHO05D006085 7.5e-123 444.9 462 57.8
CiPaw.06G151300 Carya illinoinensis HOM05D004969 ORTHO05D006085 1.3e-122 444.1 387 64.1
TWI77G0063 Tripterygium wilfordii HOM05D004969 ORTHO05D006085 1.1e-121 441.0 471 57.7
CsaV3_5G020190 Cucumis sativus L. HOM05D004969 ORTHO05D006085 5.4e-121 438.7 417 59.7
CDE04G1977 Ceratophyllum demersum HOM05D004969 ORTHO05D006085 7.0e-121 438.3 459 58.2
COL.COLO4_05992 Corchorus olitorius HOM05D004598 ORTHO05D005550 1.6e-120 437.2 390 66.9
Medtr3g063200 Medicago truncatula HOM05D004969 ORTHO05D006085 1.9e-118 430.3 455 58.5
Nn5g27434 Nelumbo nucifera HOM05D004969 ORTHO05D006085 1.9e-118 430.3 454 60.1
CANSAT78G2392 Cannabis sativa HOM05D004969 ORTHO05D006085 2.5e-118 429.9 425 61.4
MELO3C025065.2 Cucumis melo HOM05D004969 ORTHO05D006085 4.2e-118 429.1 417 59.0
PSO017G0293 Papaver somniferum HOM05D004969 ORTHO05D006085 5.5e-118 428.7 461 57.7
PSO170G6732 Papaver somniferum HOM05D004969 ORTHO05D006085 5.5e-118 428.7 462 58.2
ECA247G1475 Erigeron canadensis HOM05D004969 ORTHO05D006085 9.5e-118 427.9 420 60.0
Eucgr.A02100 Eucalyptus grandis HOM05D004969 ORTHO05D006085 1.4e-116 424.1 377 65.3
Lsat_1_v5_gn_1_25461 Lactuca sativa HOM05D004969 ORTHO05D006085 1.4e-116 424.1 455 56.3
Psat5g144880 Pisum sativum HOM05D004969 ORTHO05D006085 3.0e-116 422.9 456 57.5
Sabra17G0108000 Salix brachista HOM05D004969 ORTHO05D006085 5.2e-116 422.2 409 60.4
FAN03G1223 Fragaria x ananassa HOM05D004969 ORTHO05D006085 8.9e-116 421.4 435 57.5
Sed0015915 Sechium edule HOM05D004969 ORTHO05D006085 1.5e-115 420.6 435 56.1
Carub.0006s1483 Capsella rubella HOM05D004969 ORTHO05D006085 5.7e-115 418.7 477 54.5
Ciclev10011792m.g Citrus clementina HOM05D004969 ORTHO05D006085 8.3e-114 414.8 463 54.6
ATR1136G165 Amborella trichopoda HOM05D004969 ORTHO05D006085 2.0e-112 410.2 369 64.5
Thhalv10013528m.g Eutrema salsugineum HOM05D004969 ORTHO05D006085 2.9e-111 406.4 463 55.7
Sc23g0001560 Simmondsia chinensis HOM05D004969 ORTHO05D006085 3.8e-111 406.0 455 56.0
A10p22590 Brassica napus HOM05D004969 ORTHO05D006085 5.6e-110 402.1 483 54.0
BraA10t44321Z Brassica rapa HOM05D004969 ORTHO05D006085 5.6e-110 402.1 483 54.0
BolC2t06766H Brassica oleracea HOM05D004969 ORTHO05D006085 4.0e-108 396.0 475 52.6
Sp6g27550 Schrenkiella parvula HOM05D004969 ORTHO05D006085 4.0e-108 396.0 466 54.3
BraA02t05337Z Brassica rapa HOM05D004969 ORTHO05D006085 1.5e-107 394.0 470 53.8
HPP92_004464 Vanilla planifolia HOM05D004969 ORTHO05D006085 3.4e-107 392.9 456 54.4
THA.LOC104827189 Tarenaya hassleriana HOM05D004969 ORTHO05D006085 5.8e-107 392.1 479 49.9
Gohir.D07G082700 Gossypium hirsutum HOM05D004969 ORTHO05D006085 4.1e-105 386.0 319 67.4
DCAR_014392 Daucus carota HOM05D004969 ORTHO05D006085 5.4e-105 385.6 384 59.1
Hma1.2p1_0342F.1_g130660 Hydrangea macrophylla HOM05D004969 ORTHO05D006085 9.2e-105 384.8 323 69.0
BolC9t58883H Brassica oleracea HOM05D004969 ORTHO05D006085 6.6e-103 378.6 480 51.7
BcaB08g36833 Brassica carinata HOM05D004969 ORTHO05D006085 8.0e-101 371.7 481 50.9
vmacro00973 Vaccinium macrocarpon HOM05D004969 ORTHO05D006085 6.8e-100 368.6 652 42.0
C09p60500 Brassica napus HOM05D004969 ORTHO05D006085 1.5e-99 367.5 482 51.0
ClCG01G008270 Citrullus lanatus HOM05D004969 ORTHO05D006085 1.5e-99 367.5 461 50.8
THA.LOC104802933 Tarenaya hassleriana HOM05D004969 ORTHO05D006085 9.8e-99 364.8 463 50.3
BcaC03g18507 Brassica carinata HOM05D006375 ORTHO05D008188 4.9e-98 362.5 445 53.5
A02p03690 Brassica napus HOM05D006375 ORTHO05D008188 8.3e-98 361.7 461 51.8
C02p08510 Brassica napus HOM05D006375 ORTHO05D008188 4.1e-97 359.4 454 52.9
HPP92_004490 Vanilla planifolia HOM05D004969 ORTHO05D006085 2.1e-96 357.1 470 51.3
CiPaw.05G038800 Carya illinoinensis HOM05D004969 ORTHO05D006085 4.6e-96 355.9 394 56.6
MSTRG.1535 Avicennia marina HOM05D004969 ORTHO05D006085 6.0e-96 355.5 455 49.5
AT5G16620 Arabidopsis thaliana HOM05D004969 ORTHO05D006085 7.8e-96 355.1 461 51.0
AL6G27590 Arabidopsis lyrata HOM05D004969 ORTHO05D006085 1.7e-95 354.0 461 51.0
Os04g0439900 Oryza sativa ssp. japonica HOM05D004969 ORTHO05D006085 2.3e-95 353.6 385 54.0
FAN06G2886 Fragaria x ananassa HOM05D004969 ORTHO05D006085 5.0e-95 352.4 392 55.6
FAN10G2597 Fragaria x ananassa HOM05D004969 ORTHO05D006085 5.0e-95 352.4 392 55.6
PGSC0003DMG400023281 Solanum tuberosum HOM05D004969 ORTHO05D006085 7.3e-94 348.6 306 66.7
arahy.Tifrunner.gnm1.ann1.70N71I Arachis hypogaea HOM05D004969 ORTHO05D006085 1.1e-92 344.7 336 60.4
unitig_8.g3641 Utricularia gibba HOM05D004969 ORTHO05D006085 2.3e-92 343.6 375 58.1
SGA_v2.0_scaffold25G11066 Striga asiatica HOM05D004969 ORTHO05D007712 7.5e-91 338.6 304 65.1
Zm00001eb082230 Zea mays HOM05D004969 ORTHO05D006085 9.9e-91 338.2 386 51.3
Aa31LG11G13030 Aethionema arabicum HOM05D004969 ORTHO05D006085 1.2e-88 331.3 469 49.7
Atru.chr1.1922 Acer truncatum HOM05D004969 ORTHO05D006085 1.7e-87 327.4 320 60.3
SEGI_27085 Sequoiadendron giganteum HOM05D004969 ORTHO05D006085 1.7e-87 327.4 365 54.2
Hund27125 Selenicereus undatus HOM05D004969 ORTHO05D006085 1.6e-85 320.9 599 40.4
Hund27130 Selenicereus undatus HOM05D004969 ORTHO05D006085 1.6e-85 320.9 599 40.4
Oeu064082.1 Olea europaea HOM05D004969 ORTHO05D006085 3.6e-85 319.7 312 60.3
CARHR196580 Cardamine hirsuta HOM05D004969 ORTHO05D006085 1.2e-83 314.7 328 57.9
Mapoly0007s0079 Marchantia polymorpha HOM05D004969 ORTHO05D006085 2.2e-82 310.5 400 52.0
CDE07G1303 Ceratophyllum demersum HOM05D004969 ORTHO05D006085 6.4e-82 308.9 318 57.2
Pp3c4_25740 Physcomitrium patens HOM05D004969 ORTHO05D006085 3.0e-79 300.1 363 52.9
QL11p019695 Quercus lobata HOM05D004969 ORTHO05D006085 5.6e-78 295.8 496 41.9
Pp3c26_4000 Physcomitrium patens HOM05D004969 ORTHO05D006085 4.4e-75 286.2 370 51.4
Zm00001eb422870 Zea mays HOM05D004969 ORTHO05D006085 7.6e-75 285.4 452 44.9
AUR62023559 Chenopodium quinoa HOM05D004969 ORTHO05D006085 1.9e-73 280.8 461 45.3
arahy.Tifrunner.gnm1.ann1.247CUK Arachis hypogaea HOM05D004969 ORTHO05D006085 7.1e-73 278.9 319 56.7
Sabra04G0058000 Salix brachista HOM05D004969 ORTHO05D006085 3.6e-69 266.5 214 66.8
AagrBONN_evm.TU.Sc2ySwM_362.1764 Anthoceros agrestis HOM05D004969 ORTHO05D006085 5.8e-67 259.2 371 49.3
SMO367G0370 Selaginella moellendorffii HOM05D004969 ORTHO05D006085 5.1e-63 246.1 387 44.4
Hund16770 Selenicereus undatus HOM05D004969 ORTHO05D006085 1.1e-62 245.0 202 62.9
TPR.G37348 Trifolium pratense HOM05D004969 ORTHO05D006085 4.9e-58 229.6 355 49.9
CBR_g49427 Chara braunii HOM05D004969 ORTHO05D006085 1.6e-56 224.6 327 47.1
HanXRQChr02g0036751 Helianthus annuus HOM05D004969 ORTHO05D006085 3.9e-55 219.9 289 47.1
MBI06_g45016_MAGBIO Magnolia biondii HOM05D004969 ORTHO05D006085 2.5e-54 217.2 328 49.4
Gohir.A07G173560 Gossypium hirsutum HOM05D004969 ORTHO05D006085 5.3e-52 209.5 116 90.5
HanXRQChr02g0036561 Helianthus annuus HOM05D004969 ORTHO05D006085 4.9e-50 203.0 456 37.7
TPR.G14671 Trifolium pratense HOM05D004969 ORTHO05D006085 3.7e-45 186.8 99 88.9
FAN01G1532 Fragaria x ananassa HOM05D004969 ORTHO05D006085 8.5e-42 175.6 287 43.9
EL10Ac1g00146 Beta vulgaris HOM05D004969 ORTHO05D006085 1.0e-39 168.7 402 39.6
Sabra04G0057900 Salix brachista HOM05D004969 ORTHO05D006085 3.4e-35 153.7 265 44.2
Cre12.g508000 Chlamydomonas reinhardtii HOM05D004969 ORTHO05D006085 1.3e-34 151.8 161 46.0
Hund31138 Selenicereus undatus HOM05D004969 ORTHO05D006085 6.1e-32 142.9 282 39.4
THA.LOC104802935 Tarenaya hassleriana HOM05D004969 ORTHO05D006085 8.8e-31 139.0 335 37.9
Hund16636 Selenicereus undatus HOM05D004969 ORTHO05D006085 4.4e-30 136.7 282 38.3
CDE07G1829 Ceratophyllum demersum HOM05D004969 ORTHO05D006085 1.1e-28 132.1 67 97.0
FvH4_2g09382 Fragaria vesca HOM05D004969 ORTHO05D006085 4.5e-27 126.7 157 48.4
MCO11G221 Micromonas commoda HOM05D004969 ORTHO05D006085 2.1e-24 117.9 347 33.1
FAN15G1524 Fragaria x ananassa HOM05D004969 ORTHO05D006085 6.1e-24 116.3 74 81.1
MELO3C025953.2 Cucumis melo HOM05D004969 ORTHO05D006085 4.8e-21 106.7 64 79.7
Oeu000537.1 Olea europaea HOM05D004969 ORTHO05D006085 1.8e-20 104.8 69 78.3
AUR62004590 Chenopodium quinoa HOM05D004969 ORTHO05D006085 1.5e-17 95.1 198 40.4
MD02G1236200 Malus domestica HOM05D005192 ORTHO05D006023 1.8e-15 88.2 94 52.1
FvH4_2g09383 Fragaria vesca HOM05D004969 ORTHO05D006085 1.2e-14 85.5 46 84.8
Hund14746 Selenicereus undatus HOM05D004969 ORTHO05D006085 9.7e-14 82.4 51 72.5
CARHR196590 Cardamine hirsuta HOM05D004969 ORTHO05D006085 3.1e-12 77.4 145 41.4
Haze_10772 Corylus avellana HOM05D004969 ORTHO05D006085 7.0e-12 76.3 105 49.5
Gohir.A07G173840 Gossypium hirsutum HOM05D004969 ORTHO05D006085 1.0e-10 72.4 157 38.2
HPP92_017745 Vanilla planifolia HOM05D004969 ORTHO05D006085 1.7e-10 71.6 83 49.4
SHI30104 Sapria himalayana HOM05D007291 ORTHO05D009038 2.9e-10 70.9 65 49.2
Cre12.g490650 Chlamydomonas reinhardtii HOM05D004969 ORTHO05D006085 2.1e-08 64.7 138 26.1
MELO3C033346.2 Cucumis melo HOM05D004969 ORTHO05D044988 2.7e-08 64.3 52 65.4


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