Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0028003 Camellia sinensis var. sinensis HOM05D006417 ORTHO05D008113 1.7e-70 269.2 135 100.0
AL1G27360 Arabidopsis lyrata HOM05D006417 ORTHO05D008113 6.0e-20 101.3 59 93.2
AT1G15270 Arabidopsis thaliana HOM05D006417 ORTHO05D008113 6.0e-20 101.3 59 93.2
Carub.0001s1503 Capsella rubella HOM05D006417 ORTHO05D008113 6.0e-20 101.3 59 93.2
Ciclev10026914m.g Citrus clementina HOM05D006417 ORTHO05D008113 6.0e-20 101.3 59 93.2
Aa31LG4G200 Aethionema arabicum HOM05D006417 ORTHO05D008113 1.0e-19 100.5 59 93.2
Prupe.3G069900 Prunus persica HOM05D006417 ORTHO05D008113 1.0e-19 100.5 59 91.5
BcaB03g13069 Brassica carinata HOM05D006417 ORTHO05D008113 1.8e-19 99.8 59 91.5
MD17G1194100 Malus domestica HOM05D006417 ORTHO05D008113 1.8e-19 99.8 59 91.5
Hma1.2p1_2039F.1_g312170 Hydrangea macrophylla HOM05D006417 ORTHO05D008113 2.3e-19 99.4 57 91.2
BcaC07g38776 Brassica carinata HOM05D006417 ORTHO05D008113 3.0e-19 99.0 59 89.8
BcaC07g41515 Brassica carinata HOM05D006417 ORTHO05D008113 3.0e-19 99.0 59 89.8
A06p11260 Brassica napus HOM05D006417 ORTHO05D008113 3.0e-19 99.0 59 89.8
A08p31670 Brassica napus HOM05D006417 ORTHO05D008113 3.0e-19 99.0 59 89.8
A09p61510 Brassica napus HOM05D006417 ORTHO05D008113 3.0e-19 99.0 59 89.8
C08p45090 Brassica napus HOM05D006417 ORTHO05D008113 3.0e-19 99.0 59 89.8
BolC8t52055H Brassica oleracea HOM05D006417 ORTHO05D008113 3.0e-19 99.0 59 89.8
BraA06t24306Z Brassica rapa HOM05D006417 ORTHO05D008113 3.0e-19 99.0 59 89.8
BraA09t41524Z Brassica rapa HOM05D006417 ORTHO05D008113 3.0e-19 99.0 59 89.8
CARHR015790 Cardamine hirsuta HOM05D006417 ORTHO05D008113 3.0e-19 99.0 59 89.8
Sp1g13580 Schrenkiella parvula HOM05D006417 ORTHO05D008113 3.0e-19 99.0 59 89.8
Gohir.A09G082600 Gossypium hirsutum HOM05D006417 ORTHO05D008113 3.9e-19 98.6 59 91.5
SalBow2G2995 Salvia bowleyana HOM05D006417 ORTHO05D008113 3.9e-19 98.6 59 89.8
BcaC05g25455 Brassica carinata HOM05D006417 ORTHO05D008113 5.1e-19 98.2 59 89.8
BcaC05g25459 Brassica carinata HOM05D006417 ORTHO05D008113 5.1e-19 98.2 59 89.8
BolC5t30076H Brassica oleracea HOM05D006417 ORTHO05D008113 5.1e-19 98.2 59 89.8
CsaV3_3G010850 Cucumis sativus L. HOM05D006417 ORTHO05D008113 6.7e-19 97.8 88 63.6
MBI06_g06678_MAGBIO Magnolia biondii HOM05D006417 ORTHO05D008113 6.7e-19 97.8 59 88.1
Sed0026778 Sechium edule HOM05D006417 ORTHO05D008113 6.7e-19 97.8 59 89.8
Gohir.D09G082500 Gossypium hirsutum HOM05D006417 ORTHO05D008113 8.7e-19 97.4 59 89.8
TAR626G0232 Trochodendron aralioides HOM05D006417 ORTHO05D008113 8.7e-19 97.4 59 88.1
DCAR_023056 Daucus carota HOM05D006417 ORTHO05D008113 1.1e-18 97.1 67 79.1
Lj5A59T64 Lonicera japonica HOM05D006417 ORTHO05D008113 1.1e-18 97.1 59 88.1
Potri.001G181800 Populus trichocarpa HOM05D006417 ORTHO05D008113 1.1e-18 97.1 59 88.1
Sed0004760 Sechium edule HOM05D006417 ORTHO05D008113 1.1e-18 97.1 59 88.1
Thecc.06G089800 Theobroma cacao HOM05D006417 ORTHO05D008113 1.1e-18 97.1 59 88.1
ATR0724G030 Amborella trichopoda HOM05D006417 ORTHO05D008113 1.5e-18 96.7 59 88.1
ClCG05G003220 Citrullus lanatus HOM05D006417 ORTHO05D008113 1.5e-18 96.7 59 88.1
FAN14G4157 Fragaria x ananassa HOM05D006417 ORTHO05D008113 1.5e-18 96.7 59 88.1
ClCG02G009660 Citrullus lanatus HOM05D006417 ORTHO05D008113 1.9e-18 96.3 59 88.1
Migut.I00879 Erythranthe guttata HOM05D006417 ORTHO05D008113 1.9e-18 96.3 59 88.1
CANSAT56G0242 Cannabis sativa HOM05D006417 ORTHO05D008113 2.5e-18 95.9 59 86.4
Glyma.08G206000 Glycine max HOM05D006417 ORTHO05D008113 3.3e-18 95.5 63 81.0
unitig_27.g25076 Utricularia gibba HOM05D006417 ORTHO05D008113 3.3e-18 95.5 59 88.1
FAN02G0035 Fragaria x ananassa HOM05D006417 ORTHO05D008113 4.3e-18 95.1 59 86.4
Glyma.07G005600 Glycine max HOM05D006417 ORTHO05D008113 4.3e-18 95.1 63 81.0
Medtr4g012800 Medicago truncatula HOM05D006417 ORTHO05D008113 4.3e-18 95.1 63 81.0
Psat7g250440 Pisum sativum HOM05D006417 ORTHO05D008113 4.3e-18 95.1 63 81.0
RcHm_v2.0_Chr2g0138111 Rosa chinensis HOM05D006417 ORTHO05D008113 4.3e-18 95.1 59 86.4
Aqoxy7G01686 Aquilegia oxysepala HOM05D006417 ORTHO05D008113 5.6e-18 94.7 59 84.7
FAN05G1876 Fragaria x ananassa HOM05D006417 ORTHO05D008113 9.6e-18 94.0 59 84.7
RcHm_v2.0_Chr2g0106421 Rosa chinensis HOM05D006417 ORTHO05D008113 9.6e-18 94.0 59 86.4
Migut.D01026 Erythranthe guttata HOM05D006417 ORTHO05D008113 1.3e-17 93.6 59 86.4
Phvul.010G150000 Phaseolus vulgaris HOM05D006417 ORTHO05D008113 1.3e-17 93.6 63 77.8
Aqoxy7G03790 Aquilegia oxysepala HOM05D006417 ORTHO05D008113 1.6e-17 93.2 59 83.1
Lj3g0004039 Lotus japonicus HOM05D006417 ORTHO05D008113 2.1e-17 92.8 59 83.1
Lalb_Chr01g0012721 Lupinus albus HOM05D006417 ORTHO05D008113 2.1e-17 92.8 59 83.1
Eucgr.J02983 Eucalyptus grandis HOM05D006417 ORTHO05D008113 3.6e-17 92.0 59 84.7
FAN09G4522 Fragaria x ananassa HOM05D006417 ORTHO05D008113 4.8e-17 91.7 59 83.1
Hund06616 Selenicereus undatus HOM05D006417 ORTHO05D008113 6.2e-17 91.3 59 83.1
HPP92_003724 Vanilla planifolia HOM05D002497 ORTHO05D002697 6.2e-17 91.3 71 70.4
Dinv38039 Davidia involucrata HOM05D006417 ORTHO05D008113 8.1e-17 90.9 59 86.4
SGA_v2.0_scaffold37G14829 Striga asiatica HOM05D006417 ORTHO05D008113 8.1e-17 90.9 101 54.5
C08p17070 Brassica napus HOM05D006417 ORTHO05D008113 1.1e-16 90.5 54 87.0
BolC8t49333H Brassica oleracea HOM05D006417 ORTHO05D008113 1.1e-16 90.5 54 87.0
Manes.04G124600 Manihot esculenta HOM05D006417 ORTHO05D008113 1.1e-16 90.5 68 77.9
Gorai.006G098200 Gossypium raimondii HOM05D006417 ORTHO05D008113 1.8e-16 89.7 69 76.8
Atru.chr1.3302 Acer truncatum HOM05D006417 ORTHO05D008113 2.4e-16 89.4 59 79.7
Glyma.20G047300 Glycine max HOM05D006417 ORTHO05D008113 2.4e-16 89.4 63 76.2
HanXRQChr04g0096081 Helianthus annuus HOM05D006417 ORTHO05D008113 2.4e-16 89.4 59 88.1
Haze_16401 Corylus avellana HOM05D006417 ORTHO05D008113 3.1e-16 89.0 59 86.4
FAN26G3442 Fragaria x ananassa HOM05D006417 ORTHO05D008113 5.3e-16 88.2 59 84.7
Lsat_1_v5_gn_5_130340 Lactuca sativa HOM05D006417 ORTHO05D008113 5.3e-16 88.2 59 86.4
Nn2g11755 Nelumbo nucifera HOM05D006417 ORTHO05D008113 5.3e-16 88.2 74 71.6
Zm00001eb225700 Zea mays HOM05D006417 ORTHO05D008113 5.3e-16 88.2 59 86.4
EL10Ac9g22008 Beta vulgaris HOM05D006417 ORTHO05D008113 6.9e-16 87.8 59 81.4
HanXRQChr12g0376701 Helianthus annuus HOM05D006417 ORTHO05D008113 6.9e-16 87.8 59 86.4
Aa31LG8G3190 Aethionema arabicum HOM05D006417 ORTHO05D008113 9.0e-16 87.4 59 81.4
AT3G16040 Arabidopsis thaliana HOM05D006417 ORTHO05D008113 9.0e-16 87.4 59 81.4
CiPaw.01G238100 Carya illinoinensis HOM05D006417 ORTHO05D008113 9.0e-16 87.4 59 84.7
COL.COLO4_30395 Corchorus olitorius HOM05D006417 ORTHO05D008113 9.0e-16 87.4 59 81.4
AL3G28690 Arabidopsis lyrata HOM05D006417 ORTHO05D008113 2.0e-15 86.3 59 79.7
AL810U10020 Arabidopsis lyrata HOM05D006417 ORTHO05D008113 2.0e-15 86.3 59 79.7
Cpa.g.sc41.8 Carica papaya HOM05D006417 ORTHO05D008113 2.0e-15 86.3 65 73.8
CiPaw.02G150500 Carya illinoinensis HOM05D006417 ORTHO05D008113 2.0e-15 86.3 59 84.7
SalBow2G0478 Salvia bowleyana HOM05D008308 ORTHO05D008113 2.0e-15 86.3 56 82.1
Pp3c23_11500 Physcomitrium patens HOM05D006417 ORTHO05D008113 2.6e-15 85.9 58 79.3
Sc12g0009320 Simmondsia chinensis HOM05D006417 ORTHO05D008113 2.6e-15 85.9 59 79.7
Oeu063955.1 Olea europaea HOM05D006417 ORTHO05D008113 3.4e-15 85.5 59 84.7
AagrBONN_evm.TU.Sc2ySwM_117.2290 Anthoceros agrestis HOM05D006417 ORTHO05D008113 5.8e-15 84.7 59 79.7
C05p50430 Brassica napus HOM05D006417 ORTHO05D008113 5.8e-15 84.7 76 64.5
Carub.0003s1577 Capsella rubella HOM05D006417 ORTHO05D008113 5.8e-15 84.7 59 78.0
Cc04_g03270 Coffea canephora HOM05D006417 ORTHO05D008113 7.6e-15 84.3 58 82.8
CARHR091200 Cardamine hirsuta HOM05D006417 ORTHO05D008113 9.9e-15 84.0 59 79.7
Lj3g0012949 Lotus japonicus HOM05D006417 ORTHO05D008113 9.9e-15 84.0 60 80.0
A05p33430 Brassica napus HOM05D006417 ORTHO05D008113 1.3e-14 83.6 59 78.0
Thhalv10022282m.g Eutrema salsugineum HOM05D006417 ORTHO05D008113 1.3e-14 83.6 74 64.9
GSVIVG01017091001 Vitis vinifera HOM05D006417 ORTHO05D008113 1.3e-14 83.6 59 79.7
Thhalv10009202m.g Eutrema salsugineum HOM05D006417 ORTHO05D008113 1.7e-14 83.2 87 60.9
Pp3c24_10010 Physcomitrium patens HOM05D006417 ORTHO05D008113 1.7e-14 83.2 58 77.6
BcaC05g28917 Brassica carinata HOM05D006417 ORTHO05D008113 3.8e-14 82.0 58 79.3
arahy.Tifrunner.gnm1.ann1.6441EL Arachis hypogaea HOM05D006417 ORTHO05D008113 4.9e-14 81.6 88 58.0
DCAR_002649 Daucus carota HOM05D006417 ORTHO05D008113 2.4e-13 79.3 59 76.3
Sp3g14390 Schrenkiella parvula HOM05D006417 ORTHO05D008113 2.4e-13 79.3 59 74.6
BcaNung06587 Brassica carinata HOM05D006417 ORTHO05D008113 3.2e-13 79.0 54 77.8
FAN19G1924 Fragaria x ananassa HOM05D006417 ORTHO05D008113 9.3e-13 77.4 48 85.4
Peaxi162Scf00034g00611 Petunia axillaris HOM05D006417 ORTHO05D008113 9.3e-13 77.4 59 74.6
DCAR_007563 Daucus carota HOM05D006417 ORTHO05D008113 1.2e-12 77.0 59 74.6
DCAR_026325 Daucus carota HOM05D006417 ORTHO05D008113 1.2e-12 77.0 59 74.6
FvH4_1g16510 Fragaria vesca HOM05D006417 ORTHO05D008113 1.2e-12 77.0 48 85.4
PGSC0003DMG400007579 Solanum tuberosum HOM05D006417 ORTHO05D008113 1.6e-12 76.6 59 74.6
Solyc12g043160.3 Solanum lycopersicum HOM05D006417 ORTHO05D008113 2.1e-12 76.3 59 74.6
Mapoly0091s0070 Marchantia polymorpha HOM05D006417 ORTHO05D008113 3.5e-12 75.5 56 71.4
Lsat_1_v5_gn_1_35180 Lactuca sativa HOM05D006417 ORTHO05D008113 6.0e-12 74.7 54 79.6
Glyma.14G136351 Glycine max HOM05D006417 ORTHO05D008113 1.0e-11 73.9 58 69.0
CAN.G144.3 Capsicum annuum HOM05D006417 ORTHO05D008113 1.8e-11 73.2 59 72.9
ECA247G1523 Erigeron canadensis HOM05D001142 ORTHO05D004628 2.3e-11 72.8 49 85.7
ClCG09G002080 Citrullus lanatus HOM05D000001 ORTHO05D000003 4.3e-10 68.6 43 88.4
BraA08t35089Z Brassica rapa HOM05D006417 ORTHO05D008113 2.1e-09 66.2 40 87.5
Cre10.g438600 Chlamydomonas reinhardtii HOM05D006417 ORTHO05D008113 3.7e-09 65.5 57 70.2
ClCG11G012700 Citrullus lanatus HOM05D006417 ORTHO05D008113 4.8e-09 65.1 59 67.8
Lalb_Chr04g0262751 Lupinus albus HOM05D006417 ORTHO05D008113 8.2e-09 64.3 40 85.0
Nitab4.5_0004241g0020 Nicotiana tabacum HOM05D006417 ORTHO05D008113 2.0e-07 59.7 59 64.4


User provided reference genes

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