Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0027970 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 2.8e-67 258.5 127 100.0
CSS0043593 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 3.3e-52 208.4 126 80.2
CSS0023272 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 6.2e-51 204.1 153 69.9
Hma1.2p1_0619F.1_g190370 Hydrangea macrophylla HOM05D000023 ORTHO05D002258 5.1e-45 184.5 110 80.9
Dinv14651 Davidia involucrata HOM05D019978 ORTHO05D018230 1.1e-44 183.3 115 75.7
CSS0016316 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 2.1e-43 179.1 126 73.8
Actinidia06841 Actinidia chinensis HOM05D000023 ORTHO05D000014 5.8e-41 171.0 104 76.9
TWI23G0203 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 9.9e-41 170.2 126 61.1
Hma1.2p1_0017F.1_g011150 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 3.0e-37 158.7 126 58.7
Lsat_1_v5_gn_5_118361 Lactuca sativa HOM05D000023 ORTHO05D000014 5.6e-36 154.5 126 54.8
Hma1.2p1_0153F.1_g067820 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 9.6e-36 153.7 127 57.5
Hma1.2p1_1125F.1_g259630 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 2.1e-35 152.5 127 55.9
Hma1.2p1_0222F.1_g093680 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 2.8e-35 152.1 127 56.7
Hma1.2p1_1425F.1_g282820 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 3.7e-35 151.8 126 56.3
HanXRQChr05g0139411 Helianthus annuus HOM05D000023 ORTHO05D000014 8.1e-35 150.6 126 55.6
Hma1.2p1_0661F.1_g197850 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 1.2e-33 146.7 111 60.4
Hma1.2p1_0169F.1_g074660 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 3.4e-33 145.2 115 58.3
ECA238G0901 Erigeron canadensis HOM05D000023 ORTHO05D000014 1.3e-32 143.3 126 50.8
AUR62042194 Chenopodium quinoa HOM05D000023 ORTHO05D000014 2.9e-32 142.1 125 51.2
RcHm_v2.0_Chr7g0223471 Rosa chinensis HOM05D000023 ORTHO05D002258 8.4e-32 140.6 110 54.5
Hund22389 Selenicereus undatus HOM05D000023 ORTHO05D000014 2.4e-31 139.0 127 52.0
AUR62012060 Chenopodium quinoa HOM05D000023 ORTHO05D000014 4.6e-30 134.8 125 49.6
EL10Ac2g03711 Beta vulgaris HOM05D000023 ORTHO05D000014 4.3e-28 128.3 126 46.0
AUR62040094 Chenopodium quinoa HOM05D000023 ORTHO05D000014 2.6e-25 119.0 125 47.2
COL.COLO4_27211 Corchorus olitorius HOM05D000023 ORTHO05D000014 3.8e-24 115.2 73 68.5
Ah.02g119120 Amaranthus hybridus HOM05D000023 ORTHO05D002258 1.9e-23 112.8 122 44.3
Ah.10g026540 Amaranthus hybridus HOM05D057872 ORTHO05D000014 1.9e-23 112.8 108 43.5
Rhsim02G0002400 Rhododendron simsii HOM05D000023 ORTHO05D000014 3.2e-23 112.1 125 43.2
Rhsim05G0125600 Rhododendron simsii HOM05D000023 ORTHO05D000014 4.2e-23 111.7 125 43.2
Hma1.2p1_0084F.1_g042930 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 4.6e-22 108.2 92 55.4
vmacro01190 Vaccinium macrocarpon HOM05D000023 ORTHO05D000014 1.8e-21 106.3 125 40.8
vmacro22609 Vaccinium macrocarpon HOM05D000023 ORTHO05D000014 1.8e-21 106.3 125 40.8
vmacro21165 Vaccinium macrocarpon HOM05D000023 ORTHO05D000014 5.1e-21 104.8 126 39.7
CSS0029210 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 6.7e-21 104.4 125 40.0
Rhsim12G0068400 Rhododendron simsii HOM05D000023 ORTHO05D000014 1.1e-20 103.6 125 40.8
RhsimUnG0210600 Rhododendron simsii HOM05D000023 ORTHO05D000014 3.3e-20 102.1 125 40.0
Hma1.2p1_1264F.1_g271330 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 7.4e-20 100.9 125 39.2
Ah.07g197140 Amaranthus hybridus HOM05D000023 ORTHO05D000014 1.6e-19 99.8 92 47.8
AUR62042294 Chenopodium quinoa HOM05D000023 ORTHO05D000014 1.6e-19 99.8 79 53.2
Hma1.2p1_0139F.1_g063210 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 8.2e-19 97.4 96 51.0
vmacro00523 Vaccinium macrocarpon HOM05D000023 ORTHO05D000014 8.2e-19 97.4 108 42.6
vmacro21168 Vaccinium macrocarpon HOM05D000023 ORTHO05D000014 1.4e-18 96.7 106 40.6
PSO500G0158 Papaver somniferum HOM05D000023 ORTHO05D000014 3.1e-18 95.5 124 39.5
PSO170G2584 Papaver somniferum HOM05D000023 ORTHO05D000014 4.1e-18 95.1 124 39.5
Rhsim12G0068300 Rhododendron simsii HOM05D000023 ORTHO05D000014 4.1e-18 95.1 118 39.0
PSO421G0727 Papaver somniferum HOM05D000023 ORTHO05D000014 5.3e-18 94.7 124 40.3
HPP92_024951 Vanilla planifolia HOM05D000023 ORTHO05D000014 5.3e-18 94.7 119 38.7
vmacro21303 Vaccinium macrocarpon HOM05D000023 ORTHO05D000014 9.0e-18 94.0 125 38.4
RhsimUnG0179600 Rhododendron simsii HOM05D000023 ORTHO05D000014 1.2e-17 93.6 110 40.0
Rhsim04G0118200 Rhododendron simsii HOM05D000023 ORTHO05D000014 1.5e-17 93.2 122 36.9
HPP92_026521 Vanilla planifolia HOM05D000023 ORTHO05D000014 3.4e-17 92.0 119 37.8
PSO675G3696 Papaver somniferum HOM05D000023 ORTHO05D000014 4.5e-17 91.7 124 38.7
CSS0003700 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 5.9e-17 91.3 111 37.8
Hma1.2p1_0006F.1_g004740 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 7.6e-17 90.9 111 36.9
Hma1.2p1_0400F.1_g144380 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 1.7e-16 89.7 113 38.1
PSO063G5350 Papaver somniferum HOM05D000023 ORTHO05D000014 2.9e-16 89.0 124 37.9
Hma1.2p1_0232F.1_g097790 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 6.5e-16 87.8 118 33.9
PSO675G4268 Papaver somniferum HOM05D000023 ORTHO05D000014 6.5e-16 87.8 124 37.9
COL.COLO4_06621 Corchorus olitorius HOM05D023965 ORTHO05D000014 4.2e-15 85.1 58 65.5
RhsimUnG0179400 Rhododendron simsii HOM05D000023 ORTHO05D000014 5.5e-15 84.7 103 37.9
RcHm_v2.0_Chr5g0011621 Rosa chinensis HOM05D013926 ORTHO05D020985 2.7e-14 82.4 125 40.0
Hma1.2p1_2537F.1_g324110 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 8.8e-13 77.4 67 53.7
Rhsim01G0022100 Rhododendron simsii HOM05D000023 ORTHO05D000014 1.5e-12 76.6 86 37.2
Nn7g36509 Nelumbo nucifera HOM05D000023 ORTHO05D000014 1.9e-12 76.3 105 31.4
Rhsim03G0158500 Rhododendron simsii HOM05D000023 ORTHO05D000014 4.3e-12 75.1 97 38.1
Hma1.2p1_0801F.1_g220220 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 2.2e-11 72.8 67 52.2
vmacro03238 Vaccinium macrocarpon HOM05D000023 ORTHO05D000014 5.3e-10 68.2 125 27.2
SEGI_02520 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 6.9e-10 67.8 117 34.2
SEGI_05729 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 6.9e-10 67.8 117 34.2
TWI18G0892 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 2.6e-09 65.9 105 29.5
TWI63G0054 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 2.6e-09 65.9 105 29.5
ECA240G1446 Erigeron canadensis HOM05D001392 ORTHO05D003370 3.4e-09 65.5 84 39.3
TWI74G0862 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 4.5e-09 65.1 105 29.5
Lj5g0002668 Lotus japonicus HOM05D000023 ORTHO05D000014 5.9e-09 64.7 131 26.7
SEGI_08866 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 5.9e-09 64.7 118 30.5
TWI81G1053 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 1.0e-08 63.9 94 33.0
arahy.Tifrunner.gnm1.ann1.KX0AYA Arachis hypogaea HOM05D000023 ORTHO05D000014 2.2e-08 62.8 129 26.4
SEGI_28317 Sequoiadendron giganteum HOM05D004541 ORTHO05D006163 2.2e-08 62.8 116 32.8
Rhsim03G0186400 Rhododendron simsii HOM05D002499 ORTHO05D000014 5.0e-08 61.6 61 39.3
SEGI_17312 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 5.0e-08 61.6 129 27.1
Actinidia02644 Actinidia chinensis HOM05D000023 ORTHO05D000014 8.5e-08 60.8 43 69.8
SEGI_15034 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 2.5e-07 59.3 124 33.9
AUR62022925 Chenopodium quinoa HOM05D000023 ORTHO05D000014 4.2e-07 58.5 130 30.8
arahy.Tifrunner.gnm1.ann1.CHR5JU Arachis hypogaea HOM05D000023 ORTHO05D000014 7.2e-07 57.8 129 24.0
arahy.Tifrunner.gnm1.ann1.LZ7HA6 Arachis hypogaea HOM05D000023 ORTHO05D000014 7.2e-07 57.8 129 24.0
ECA233G1350 Erigeron canadensis HOM05D000023 ORTHO05D000001 7.2e-07 57.8 114 24.6
Lsat_1_v5_gn_2_11620 Lactuca sativa HOM05D000023 ORTHO05D000014 7.2e-07 57.8 62 43.5
RcHm_v2.0_Chr4g0434271 Rosa chinensis HOM05D000023 ORTHO05D000014 7.2e-07 57.8 108 27.8
Hma1.2p1_1081F.1_g255100 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 9.4e-07 57.4 80 43.8
SEGI_09032 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 9.4e-07 57.4 104 37.5
arahy.Tifrunner.gnm1.ann1.59J3RY Arachis hypogaea HOM05D000023 ORTHO05D000014 1.6e-06 56.6 123 24.4
arahy.Tifrunner.gnm1.ann1.MBXS5H Arachis hypogaea HOM05D000023 ORTHO05D000014 1.6e-06 56.6 107 26.2
RcHm_v2.0_Chr2g0102701 Rosa chinensis HOM05D000023 ORTHO05D000014 2.1e-06 56.2 130 24.6
SEGI_15840 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 2.1e-06 56.2 107 29.0
arahy.Tifrunner.gnm1.ann1.UX9V95 Arachis hypogaea HOM05D000023 ORTHO05D000014 2.7e-06 55.8 129 23.3
ECA233G4406 Erigeron canadensis HOM05D000131 ORTHO05D000014 2.7e-06 55.8 127 24.4
arahy.Tifrunner.gnm1.ann1.Y156SF Arachis hypogaea HOM05D000023 ORTHO05D000014 3.6e-06 55.5 129 23.3
Sopen10g016210 Solanum pennellii HOM05D000023 ORTHO05D000014 3.6e-06 55.5 117 24.8
PGSC0003DMG400017468 Solanum tuberosum HOM05D000023 ORTHO05D000014 3.6e-06 55.5 117 24.8
TWI77G0487 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 3.6e-06 55.5 131 25.2
arahy.Tifrunner.gnm1.ann1.BV9JUH Arachis hypogaea HOM05D000013 ORTHO05D000011 6.1e-06 54.7 129 23.3
Atru.chr7.1505 Acer truncatum HOM05D000023 ORTHO05D000014 7.9e-06 54.3 111 27.0


User provided reference genes

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