Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0027955 Camellia sinensis var. sinensis HOM05D001643 ORTHO05D043287 3.9e-34 147.5 72 100.0
Actinidia19791 Actinidia chinensis HOM05D001643 ORTHO05D001580 2.5e-09 65.1 35 85.7
CSS0037311 Camellia sinensis var. sinensis HOM05D001643 ORTHO05D001580 1.3e-08 62.8 35 82.9
Actinidia28665 Actinidia chinensis HOM05D001643 ORTHO05D001580 1.7e-08 62.4 29 96.6
vmacro19625 Vaccinium macrocarpon HOM05D001643 ORTHO05D001580 1.7e-08 62.4 32 87.5
Ciclev10000541m.g Citrus clementina HOM05D001643 ORTHO05D001580 2.8e-08 61.6 35 82.9
Actinidia24642 Actinidia chinensis HOM05D001643 ORTHO05D001580 3.7e-08 61.2 35 80.0
GSVIVG01000044001 Vitis vinifera HOM05D001643 ORTHO05D001580 1.4e-07 59.3 35 80.0
Rhsim05G0141900 Rhododendron simsii HOM05D001643 ORTHO05D001580 1.8e-07 58.9 35 77.1
CSS0022196 Camellia sinensis var. sinensis HOM05D001643 ORTHO05D001580 3.1e-07 58.2 49 61.2
Dinv40281 Davidia involucrata HOM05D001643 ORTHO05D001580 3.1e-07 58.2 35 74.3
Nitab4.5_0005388g0070 Nicotiana tabacum HOM05D001643 ORTHO05D001580 3.1e-07 58.2 35 77.1
Nitab4.5_0006928g0010 Nicotiana tabacum HOM05D001643 ORTHO05D001580 3.1e-07 58.2 35 77.1
TAR362G1169 Trochodendron aralioides HOM05D001643 ORTHO05D001580 3.1e-07 58.2 35 77.1
COL.COLO4_13479 Corchorus olitorius HOM05D001643 ORTHO05D001580 4.1e-07 57.8 29 89.7
Dinv23945 Davidia involucrata HOM05D001643 ORTHO05D001580 4.1e-07 57.8 35 74.3
Sabra02G0043600 Salix brachista HOM05D001643 ORTHO05D043287 4.1e-07 57.8 45 57.8
MSTRG.7798 Avicennia marina HOM05D001643 ORTHO05D001580 6.9e-07 57.0 44 63.6
TWI56G1494 Tripterygium wilfordii HOM05D001643 ORTHO05D001580 6.9e-07 57.0 31 83.9
Gohir.A08G210600 Gossypium hirsutum HOM05D001643 ORTHO05D001580 9.1e-07 56.6 31 80.6
Gohir.D08G227400 Gossypium hirsutum HOM05D001643 ORTHO05D001580 9.1e-07 56.6 31 80.6
Gorai.004G241600 Gossypium raimondii HOM05D001643 ORTHO05D001580 9.1e-07 56.6 31 80.6
Manes.08G121200 Manihot esculenta HOM05D001643 ORTHO05D001580 9.1e-07 56.6 31 80.6
Thecc.05G304400 Theobroma cacao HOM05D001643 ORTHO05D001580 9.1e-07 56.6 31 80.6
TAR365G0811 Trochodendron aralioides HOM05D001643 ORTHO05D001580 9.1e-07 56.6 35 74.3
Actinidia09141 Actinidia chinensis HOM05D001643 ORTHO05D001580 1.2e-06 56.2 45 57.8
Duzib177G1027 Durio zibethinus HOM05D001643 ORTHO05D001580 1.2e-06 56.2 31 80.6
SalBow2G3025 Salvia bowleyana HOM05D001643 ORTHO05D001580 1.2e-06 56.2 34 76.5
Sopen01g042460 Solanum pennellii HOM05D001643 ORTHO05D001580 1.2e-06 56.2 45 60.0
DCAR_024944 Daucus carota HOM05D001643 ORTHO05D001580 1.5e-06 55.8 28 85.7
Lj5C536T5 Lonicera japonica HOM05D001643 ORTHO05D001580 1.5e-06 55.8 45 60.0
Lj9C33G5 Lonicera japonica HOM05D001643 ORTHO05D001580 1.5e-06 55.8 35 71.4
Rhsim13G0024400 Rhododendron simsii HOM05D001643 ORTHO05D001580 1.5e-06 55.8 49 53.1
Sabra05G0035800 Salix brachista HOM05D001643 ORTHO05D001580 1.5e-06 55.8 34 73.5
PGSC0003DMG400028589 Solanum tuberosum HOM05D001643 ORTHO05D001580 1.5e-06 55.8 35 71.4
Cpa.g.sc48.43 Carica papaya HOM05D001643 ORTHO05D001580 2.0e-06 55.5 31 74.2
Hma1.2p1_0617F.1_g190260 Hydrangea macrophylla HOM05D001643 ORTHO05D001580 2.0e-06 55.5 35 71.4
Manes.09G166600 Manihot esculenta HOM05D001643 ORTHO05D001580 2.0e-06 55.5 31 77.4
Solyc01g098920.4 Solanum lycopersicum HOM05D001643 ORTHO05D001580 2.0e-06 55.5 45 60.0
Gohir.A11G295700 Gossypium hirsutum HOM05D001643 ORTHO05D001580 2.6e-06 55.1 31 77.4
Gohir.D11G311200 Gossypium hirsutum HOM05D001643 ORTHO05D001580 2.6e-06 55.1 31 77.4
Gorai.007G342600 Gossypium raimondii HOM05D001643 ORTHO05D001580 2.6e-06 55.1 31 77.4
Aqoxy5G00508 Aquilegia oxysepala HOM05D001643 ORTHO05D001580 3.4e-06 54.7 55 52.7
HanXRQChr14g0446261 Helianthus annuus HOM05D001643 ORTHO05D001580 3.4e-06 54.7 45 60.0
Peaxi162Scf00037g00031 Petunia axillaris HOM05D001643 ORTHO05D001580 4.5e-06 54.3 27 88.9
PSO210G2302 Papaver somniferum HOM05D001643 ORTHO05D001580 5.9e-06 53.9 35 65.7
PSO832G1451 Papaver somniferum HOM05D001643 ORTHO05D001580 5.9e-06 53.9 35 65.7
PGR083G0958 Punica granatum HOM05D001643 ORTHO05D001580 5.9e-06 53.9 30 83.3
Aqoxy4G00038 Aquilegia oxysepala HOM05D001643 ORTHO05D001580 7.7e-06 53.5 47 55.3
CAN.G1077.12 Capsicum annuum HOM05D001643 ORTHO05D001580 7.7e-06 53.5 45 57.8
Lj2C1174G2 Lonicera japonica HOM05D001643 ORTHO05D001580 7.7e-06 53.5 45 55.6


User provided reference genes

Program Settings