Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0027952 Camellia sinensis var. sinensis HOM05D005039 ORTHO05D006145 2.0e-43 178.7 93 100.0
CSS0032758 Camellia sinensis var. sinensis HOM05D005039 ORTHO05D006145 1.5e-41 172.6 91 97.8
FvH4_7g34230 Fragaria vesca HOM05D005039 ORTHO05D006145 1.6e-40 169.1 91 95.6
FAN01G1789 Fragaria x ananassa HOM05D005039 ORTHO05D006145 1.6e-40 169.1 91 95.6
FAN03G0337 Fragaria x ananassa HOM05D005039 ORTHO05D006145 1.6e-40 169.1 91 95.6
FAN10G2688 Fragaria x ananassa HOM05D005039 ORTHO05D006145 1.6e-40 169.1 91 95.6
MD07G1310900 Malus domestica HOM05D005039 ORTHO05D006145 1.6e-40 169.1 91 95.6
RcHm_v2.0_Chr1g0384591 Rosa chinensis HOM05D005039 ORTHO05D006145 1.6e-40 169.1 91 95.6
SGA_v2.0_scaffold188G40301 Striga asiatica HOM05D005039 ORTHO05D006145 1.6e-40 169.1 91 95.6
Prupe.2G329100 Prunus persica HOM05D005039 ORTHO05D006145 2.1e-40 168.7 91 95.6
MSTRG.24939 Avicennia marina HOM05D005039 ORTHO05D006145 2.8e-40 168.3 91 94.5
ClCG09G017310 Citrullus lanatus HOM05D005039 ORTHO05D006145 3.6e-40 167.9 91 94.5
MELO3C021899.2 Cucumis melo HOM05D005039 ORTHO05D006145 3.6e-40 167.9 91 94.5
Lj3A884T54 Lonicera japonica HOM05D005039 ORTHO05D006145 3.6e-40 167.9 91 94.5
Nn3g19238 Nelumbo nucifera HOM05D005039 ORTHO05D006145 3.6e-40 167.9 91 94.5
Aqoxy1G03063 Aquilegia oxysepala HOM05D005039 ORTHO05D006145 4.7e-40 167.5 91 94.5
Cfa016075 Carpinus fangiana HOM05D005039 ORTHO05D006145 4.7e-40 167.5 91 94.5
Nn1g02122 Nelumbo nucifera HOM05D005039 ORTHO05D006145 4.7e-40 167.5 91 93.4
GSVIVG01024328001 Vitis vinifera HOM05D005039 ORTHO05D006145 4.7e-40 167.5 91 94.5
Hund09811 Selenicereus undatus HOM05D005039 ORTHO05D006145 8.0e-40 166.8 91 93.4
Cc02_g00110 Coffea canephora HOM05D005039 ORTHO05D006145 1.0e-39 166.4 91 93.4
Oeu027894.4 Olea europaea HOM05D005039 ORTHO05D006145 1.0e-39 166.4 91 94.5
Sed0001134 Sechium edule HOM05D005039 ORTHO05D006145 1.0e-39 166.4 91 93.4
TAR629G1612 Trochodendron aralioides HOM05D005039 ORTHO05D006145 1.0e-39 166.4 91 93.4
CANSAT21G2526 Cannabis sativa HOM05D005039 ORTHO05D006145 1.8e-39 165.6 91 92.3
DCAR_020429 Daucus carota HOM05D005039 ORTHO05D006145 1.8e-39 165.6 91 93.4
Dinv29126 Davidia involucrata HOM05D005039 ORTHO05D006145 1.8e-39 165.6 91 93.4
Duzib128G1855 Durio zibethinus HOM05D005039 ORTHO05D006145 1.8e-39 165.6 91 93.4
Thecc.05G222600 Theobroma cacao HOM05D005039 ORTHO05D006145 1.8e-39 165.6 91 93.4
Migut.C00159 Erythranthe guttata HOM05D005039 ORTHO05D006145 2.3e-39 165.2 91 92.3
HanXRQChr16g0512151 Helianthus annuus HOM05D005039 ORTHO05D006145 2.3e-39 165.2 91 93.4
Lsat_1_v5_gn_9_47921 Lactuca sativa HOM05D005039 ORTHO05D006145 2.3e-39 165.2 91 93.4
SalBow7G2894 Salvia bowleyana HOM05D005039 ORTHO05D006145 2.3e-39 165.2 91 92.3
Eucgr.K00067 Eucalyptus grandis HOM05D005039 ORTHO05D006145 3.1e-39 164.9 91 92.3
Gohir.A02G125900 Gossypium hirsutum HOM05D005039 ORTHO05D006145 3.1e-39 164.9 91 92.3
Gohir.D03G054700 Gossypium hirsutum HOM05D005039 ORTHO05D006145 3.1e-39 164.9 91 92.3
Gorai.003G057600 Gossypium raimondii HOM05D005039 ORTHO05D006145 3.1e-39 164.9 91 92.3
Lj3g0003232 Lotus japonicus HOM05D005039 ORTHO05D006145 3.1e-39 164.9 90 93.3
Manes.08G160900 Manihot esculenta HOM05D005039 ORTHO05D006145 3.1e-39 164.9 91 93.4
Glyma.11G109900 Glycine max HOM05D005039 ORTHO05D006145 5.2e-39 164.1 91 92.3
Glyma.12G014800 Glycine max HOM05D005039 ORTHO05D006145 5.2e-39 164.1 91 92.3
Phvul.011G017800 Phaseolus vulgaris HOM05D005039 ORTHO05D006145 5.2e-39 164.1 91 92.3
Ca_26497_v3 Cicer arietinum L. HOM05D005039 ORTHO05D006145 6.8e-39 163.7 91 92.3
Duzib106G2059 Durio zibethinus HOM05D005039 ORTHO05D006145 6.8e-39 163.7 91 92.3
ECA232G0266 Erigeron canadensis HOM05D005039 ORTHO05D006145 6.8e-39 163.7 91 92.3
Lalb_Chr09g0320081 Lupinus albus HOM05D005039 ORTHO05D006145 6.8e-39 163.7 90 92.2
vmacro06372 Vaccinium macrocarpon HOM05D005039 ORTHO05D006145 6.8e-39 163.7 91 92.3
Peaxi162Scf00802g00029 Petunia axillaris HOM05D005039 ORTHO05D006145 1.2e-38 162.9 92 93.5
Ciclev10031435m.g Citrus clementina HOM05D005039 ORTHO05D006145 2.0e-38 162.2 91 91.2
AUR62002093 Chenopodium quinoa HOM05D005039 ORTHO05D006145 2.6e-38 161.8 91 94.5
Nitab4.5_0009864g0010 Nicotiana tabacum HOM05D005039 ORTHO05D006145 2.6e-38 161.8 92 92.4
Solyc07g045330.3 Solanum lycopersicum HOM05D005039 ORTHO05D006145 2.6e-38 161.8 92 92.4
Sopen07g023860 Solanum pennellii HOM05D005039 ORTHO05D006145 2.6e-38 161.8 92 92.4
PGSC0003DMG401017405 Solanum tuberosum HOM05D005039 ORTHO05D006145 2.6e-38 161.8 92 92.4
Atru.chr12.1876 Acer truncatum HOM05D005039 ORTHO05D006145 3.4e-38 161.4 91 89.0
Medtr5g005440 Medicago truncatula HOM05D005039 ORTHO05D006145 3.4e-38 161.4 90 91.1
Potri.013G077700 Populus trichocarpa HOM05D005039 ORTHO05D006145 4.4e-38 161.0 91 91.2
Sabra13G0066500 Salix brachista HOM05D005039 ORTHO05D006145 4.4e-38 161.0 91 91.2
CDE11G0732 Ceratophyllum demersum HOM05D005039 ORTHO05D006145 5.8e-38 160.6 91 90.1
CsaV3_2G014060 Cucumis sativus L. HOM05D005039 ORTHO05D006145 5.8e-38 160.6 91 93.4
THA.LOC104805716 Tarenaya hassleriana HOM05D005039 ORTHO05D006145 5.8e-38 160.6 91 91.2
CSS0008859 Camellia sinensis var. sinensis HOM05D005039 ORTHO05D006145 7.5e-38 160.2 91 93.4
Sp7g25580 Schrenkiella parvula HOM05D005039 ORTHO05D006145 7.5e-38 160.2 91 91.2
TWI79G0887 Tripterygium wilfordii HOM05D005039 ORTHO05D006145 7.5e-38 160.2 91 91.2
AT4G27630 Arabidopsis thaliana HOM05D005039 ORTHO05D006145 9.8e-38 159.8 91 91.2
BcaC09g50566 Brassica carinata HOM05D005039 ORTHO05D006145 9.8e-38 159.8 91 91.2
BcaNung01651 Brassica carinata HOM05D005039 ORTHO05D006145 9.8e-38 159.8 91 91.2
C01p23870 Brassica napus HOM05D005039 ORTHO05D006145 9.8e-38 159.8 91 91.2
BolC1t02332H Brassica oleracea HOM05D005039 ORTHO05D006145 9.8e-38 159.8 91 91.2
Carub.0007s1322 Capsella rubella HOM05D005039 ORTHO05D006145 9.8e-38 159.8 91 91.2
QL09p020758 Quercus lobata HOM05D005039 ORTHO05D006145 9.8e-38 159.8 90 93.3
Ah.13g072370 Amaranthus hybridus HOM05D005039 ORTHO05D006145 1.7e-37 159.1 91 93.4
EL10Ac3g05043 Beta vulgaris HOM05D005039 ORTHO05D006145 1.7e-37 159.1 91 93.4
MBI04_g12218_MAGBIO Magnolia biondii HOM05D005039 ORTHO05D006145 1.7e-37 159.1 92 90.2
CAN.G437.12 Capsicum annuum HOM05D005039 ORTHO05D006145 2.2e-37 158.7 92 91.3
A01p18920 Brassica napus HOM05D005039 ORTHO05D006145 2.9e-37 158.3 91 90.1
BraA01t01833Z Brassica rapa HOM05D005039 ORTHO05D006145 2.9e-37 158.3 91 90.1
CARHR235330 Cardamine hirsuta HOM05D005039 ORTHO05D006145 2.9e-37 158.3 91 90.1
Os04g0600800 Oryza sativa ssp. japonica HOM05D005039 ORTHO05D006145 2.9e-37 158.3 91 89.0
Thhalv10025115m.g Eutrema salsugineum HOM05D005039 ORTHO05D006145 3.7e-37 157.9 91 90.1
ATR0829G179 Amborella trichopoda HOM05D005039 ORTHO05D006145 6.4e-37 157.1 91 87.9
HPP92_014410 Vanilla planifolia HOM05D005039 ORTHO05D006145 6.4e-37 157.1 91 86.8
Zm00001eb430290 Zea mays HOM05D005039 ORTHO05D006145 6.4e-37 157.1 91 87.9
Aa31LG2G2190 Aethionema arabicum HOM05D005039 ORTHO05D006145 1.4e-36 156.0 91 89.0
AL2G19600 Arabidopsis lyrata HOM05D005039 ORTHO05D006145 1.4e-36 156.0 91 89.0
BcaB05g24073 Brassica carinata HOM05D005039 ORTHO05D006145 1.4e-36 156.0 91 89.0
BcaC03g14670 Brassica carinata HOM05D005039 ORTHO05D006145 1.4e-36 156.0 91 89.0
A02p12960 Brassica napus HOM05D005039 ORTHO05D006145 1.4e-36 156.0 91 89.0
C02p21070 Brassica napus HOM05D005039 ORTHO05D006145 1.4e-36 156.0 91 89.0
BolC2t08248H Brassica oleracea HOM05D005039 ORTHO05D006145 1.4e-36 156.0 91 89.0
BraA02t06350Z Brassica rapa HOM05D005039 ORTHO05D006145 1.4e-36 156.0 91 89.0
Carub.0002s1015 Capsella rubella HOM05D005039 ORTHO05D006145 2.4e-36 155.2 91 87.9
AT1G64990 Arabidopsis thaliana HOM05D005039 ORTHO05D006145 3.2e-36 154.8 91 87.9
PSO063G4466 Papaver somniferum HOM05D005039 ORTHO05D006145 3.2e-36 154.8 92 88.0
PSO782G0889 Papaver somniferum HOM05D005039 ORTHO05D006145 3.2e-36 154.8 92 88.0
Sp5g19320 Schrenkiella parvula HOM05D005039 ORTHO05D006145 5.4e-36 154.1 91 86.8
CARHR056390 Cardamine hirsuta HOM05D005039 ORTHO05D006145 7.0e-36 153.7 91 87.9
SEGI_29432 Sequoiadendron giganteum HOM05D005039 ORTHO05D006145 1.2e-35 152.9 91 86.8
unitig_0.g2070 Utricularia gibba HOM05D005039 ORTHO05D006145 6.6e-34 147.1 82 91.5
Mapoly0094s0006 Marchantia polymorpha HOM05D005039 ORTHO05D006145 1.4e-31 139.4 87 79.3
SMO304G0068 Selaginella moellendorffii HOM05D005039 ORTHO05D006145 9.2e-28 126.7 86 79.1
CBR_g72647 Chara braunii HOM05D005039 ORTHO05D006145 6.0e-27 124.0 87 69.0
Actinidia34332 Actinidia chinensis HOM05D005039 ORTHO05D006145 7.8e-27 123.6 64 96.9
Nitab4.5_0006992g0040 Nicotiana tabacum HOM05D005039 ORTHO05D006145 1.1e-25 119.8 92 73.9
AagrBONN_evm.TU.Sc2ySwM_369.410 Anthoceros agrestis HOM05D005039 ORTHO05D006145 4.9e-21 104.4 84 66.7
PGR142G1194 Punica granatum HOM05D005039 ORTHO05D006145 4.9e-21 104.4 63 84.1
CARHR057320 Cardamine hirsuta HOM05D005039 ORTHO05D006145 1.9e-20 102.4 67 80.6
Cre16.g674739 Chlamydomonas reinhardtii HOM05D005039 ORTHO05D006145 1.4e-12 76.3 75 46.7
Potri.019G042201 Populus trichocarpa HOM05D005039 ORTHO05D006145 1.9e-12 75.9 45 88.9
AagrBONN_evm.TU.Sc2ySwM_369.165 Anthoceros agrestis HOM05D005039 ORTHO05D006145 2.4e-12 75.5 54 68.5
AUR62028211 Chenopodium quinoa HOM05D005039 ORTHO05D006145 9.3e-12 73.6 45 84.4
Actinidia08765 Actinidia chinensis HOM05D005039 ORTHO05D006145 1.2e-11 73.2 40 95.0
Sc13g0011000 Simmondsia chinensis HOM05D005039 ORTHO05D006145 1.2e-11 73.2 40 95.0
arahy.Tifrunner.gnm1.ann1.GG16T8 Arachis hypogaea HOM05D005039 ORTHO05D006145 1.6e-11 72.8 40 95.0
arahy.Tifrunner.gnm1.ann1.IZT0PT Arachis hypogaea HOM05D005039 ORTHO05D006145 1.6e-11 72.8 40 95.0
Psat7g155320 Pisum sativum HOM05D005039 ORTHO05D006145 2.7e-11 72.0 59 71.2
PRCOL_00000150 Prasinoderma coloniale HOM05D005039 ORTHO05D006145 2.7e-11 72.0 77 41.6
Rhsim03G0224300 Rhododendron simsii HOM05D005039 ORTHO05D006145 6.0e-11 70.9 42 88.1
MD01G1239000 Malus domestica HOM05D005039 ORTHO05D006145 1.0e-10 70.1 40 92.5
MCO06G137 Micromonas commoda HOM05D005039 ORTHO05D006145 8.7e-10 67.0 81 42.0


User provided reference genes

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