Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0027932 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 4.2e-113 411.4 210 100.0
CSS0023015 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 2.9e-77 292.4 206 74.8
CSS0029580 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 1.1e-71 273.9 203 71.9
CSS0037861 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 1.1e-71 273.9 203 71.9
CSS0039359 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 1.1e-71 273.9 203 71.9
CSS0005216 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 3.1e-71 272.3 216 69.0
CSS0004305 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 6.6e-58 228.0 186 66.7
Rhsim09G0060200 Rhododendron simsii HOM05D008549 ORTHO05D010234 1.8e-26 123.6 149 42.3
vmacro23182 Vaccinium macrocarpon HOM05D008549 ORTHO05D010234 1.8e-26 123.6 195 37.9
vmacro17806 Vaccinium macrocarpon HOM05D008549 ORTHO05D010234 2.3e-26 123.2 193 36.8
Rhsim10G0213800 Rhododendron simsii HOM05D008549 ORTHO05D010234 3.0e-26 122.9 177 38.4
Rhsim12G0092900 Rhododendron simsii HOM05D009300 ORTHO05D010234 3.9e-26 122.5 184 39.1
Rhsim02G0138000 Rhododendron simsii HOM05D009300 ORTHO05D010234 1.3e-24 117.5 179 38.0
Rhsim04G0237300 Rhododendron simsii HOM05D000107 ORTHO05D000062 6.9e-23 111.7 169 37.3
Rhsim01G0128900 Rhododendron simsii HOM05D009300 ORTHO05D010234 1.0e-21 107.8 149 36.2
Rhsim06G0220100 Rhododendron simsii HOM05D008549 ORTHO05D010234 5.0e-21 105.5 160 38.8
vmacro00531 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 6.5e-21 105.1 209 34.0
RhsimUnG0074200 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.5e-20 103.2 186 33.9
Rhsim04G0116500 Rhododendron simsii HOM05D008549 ORTHO05D010234 6.7e-18 95.1 137 37.2
vmacro12141 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 1.1e-17 94.4 168 29.8
Rhsim07G0158800 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.5e-17 93.2 213 31.9
vmacro04245 Vaccinium macrocarpon HOM05D017338 ORTHO05D010234 6.3e-16 88.6 132 39.4
RhsimUnG0068400 Rhododendron simsii HOM05D000107 ORTHO05D000062 3.1e-15 86.3 158 33.5
Rhsim04G0140300 Rhododendron simsii HOM05D000107 ORTHO05D000062 6.9e-15 85.1 155 34.2
vmacro13454 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 9.1e-15 84.7 202 33.2
vmacro14328 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 2.6e-14 83.2 125 31.2
RhsimUnG0101600 Rhododendron simsii HOM05D009300 ORTHO05D010234 9.4e-12 74.7 101 31.7
Rhsim01G0102200 Rhododendron simsii HOM05D009565 ORTHO05D012252 8.8e-10 68.2 144 31.2
CSS0010902 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 2.0e-09 67.0 81 42.0
CSS0037204 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 2.0e-09 67.0 103 36.9
CSS0007178 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 4.4e-09 65.9 83 39.8
Rhsim10G0126600 Rhododendron simsii HOM05D009565 ORTHO05D012252 5.7e-09 65.5 195 27.7
CSS0047616 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 9.7e-09 64.7 67 46.3
QL02p083298 Quercus lobata HOM05D007798 ORTHO05D009882 9.7e-09 64.7 157 31.2
vmacro12139 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 1.8e-07 60.5 79 29.1
vmacro13356 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 3.5e-06 56.2 102 33.3


User provided reference genes

Program Settings