Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0027902 Camellia sinensis var. sinensis HOM05D006571 ORTHO05D007771 4.5e-165 585.1 447 100.0
Dinv26822 Davidia involucrata HOM05D006571 ORTHO05D007771 8.4e-103 378.3 403 72.2
Oeu023993.1 Olea europaea HOM05D006571 ORTHO05D007771 1.4e-97 360.9 402 67.4
TWI09G0338 Tripterygium wilfordii HOM05D006571 ORTHO05D007771 5.3e-97 359.0 406 70.9
Hma1.2p1_0400F.1_g144570 Hydrangea macrophylla HOM05D006571 ORTHO05D007771 6.9e-97 358.6 402 74.1
Actinidia36549 Actinidia chinensis HOM05D006571 ORTHO05D007771 1.5e-96 357.5 399 71.4
Actinidia12116 Actinidia chinensis HOM05D006571 ORTHO05D007771 2.6e-96 356.7 396 72.5
Cc07_g09340 Coffea canephora HOM05D006571 ORTHO05D007771 3.8e-95 352.8 409 70.9
TWI53G0501 Tripterygium wilfordii HOM05D006571 ORTHO05D007771 4.6e-93 345.9 400 69.8
Gorai.007G204400 Gossypium raimondii HOM05D006571 ORTHO05D007771 7.9e-93 345.1 407 68.6
Phvul.003G252700 Phaseolus vulgaris HOM05D006571 ORTHO05D007771 7.9e-93 345.1 396 69.4
Duzib187G0259 Durio zibethinus HOM05D006571 ORTHO05D007771 1.1e-91 341.3 405 68.6
Glyma.16G140800 Glycine max HOM05D006571 ORTHO05D007771 1.5e-91 340.9 408 66.2
TAR376G1222 Trochodendron aralioides HOM05D006571 ORTHO05D007771 7.4e-91 338.6 405 66.4
SalBow5G2751 Salvia bowleyana HOM05D006571 ORTHO05D007771 1.7e-90 337.4 415 69.4
Manes.02G092300 Manihot esculenta HOM05D006571 ORTHO05D007771 8.2e-90 335.1 418 66.7
VMungo0251G2973 Vigna mungo HOM05D006571 ORTHO05D007771 1.4e-89 334.3 405 68.1
Gohir.D11G191700 Gossypium hirsutum HOM05D006571 ORTHO05D007771 4.1e-89 332.8 409 67.7
QL06p045652 Quercus lobata HOM05D006571 ORTHO05D007771 4.1e-89 332.8 404 71.3
Thecc.01G037900 Theobroma cacao HOM05D006571 ORTHO05D007771 5.3e-89 332.4 406 69.7
Gohir.A02G164500 Gossypium hirsutum HOM05D006571 ORTHO05D007771 9.1e-89 331.6 395 66.6
Glyma.02G057800 Glycine max HOM05D006571 ORTHO05D007771 4.5e-88 329.3 404 66.8
Haze_15108 Corylus avellana HOM05D006571 ORTHO05D007771 5.9e-88 328.9 398 66.6
CiPaw.01G036100 Carya illinoinensis HOM05D006571 ORTHO05D007771 1.3e-87 327.8 405 69.4
Psat4g091960 Pisum sativum HOM05D006571 ORTHO05D007771 2.2e-87 327.0 402 68.7
CiPaw.02G016100 Carya illinoinensis HOM05D006571 ORTHO05D007771 3.8e-87 326.2 406 69.0
Duzib147G0515 Durio zibethinus HOM05D006571 ORTHO05D007771 5.0e-87 325.9 401 67.6
Prupe.7G152600 Prunus persica HOM05D006571 ORTHO05D007771 6.5e-87 325.5 405 69.1
arahy.Tifrunner.gnm1.ann1.J8IV3X Arachis hypogaea HOM05D006571 ORTHO05D007771 1.1e-86 324.7 395 66.8
Nitab4.5_0001466g0040 Nicotiana tabacum HOM05D006571 ORTHO05D007771 1.9e-86 323.9 406 67.2
Medtr8g077860 Medicago truncatula HOM05D006571 ORTHO05D007771 5.5e-86 322.4 420 66.4
Duzib264G0679 Durio zibethinus HOM05D006571 ORTHO05D007771 9.4e-86 321.6 403 68.5
Sabra05G0102400 Salix brachista HOM05D006571 ORTHO05D007771 2.7e-85 320.1 399 58.6
Lalb_Chr09g0322511 Lupinus albus HOM05D006571 ORTHO05D007771 6.1e-85 318.9 416 63.2
PGSC0003DMG400017777 Solanum tuberosum HOM05D006571 ORTHO05D007771 6.1e-85 318.9 402 67.2
Atru.chr3.554 Acer truncatum HOM05D006571 ORTHO05D007771 7.9e-85 318.5 405 67.4
AL5G30850 Arabidopsis lyrata HOM05D006571 ORTHO05D007771 1.8e-84 317.4 413 60.8
Potri.005G124700 Populus trichocarpa HOM05D006571 ORTHO05D007771 2.3e-84 317.0 422 65.2
PGR102G1801 Punica granatum HOM05D006571 ORTHO05D007771 3.9e-84 316.2 412 67.5
GSVIVG01018984001 Vitis vinifera HOM05D006571 ORTHO05D007771 6.7e-84 315.5 404 59.2
MD02G1150500 Malus domestica HOM05D006571 ORTHO05D007771 1.1e-83 314.7 405 66.9
Gohir.A11G185200 Gossypium hirsutum HOM05D006571 ORTHO05D007771 1.5e-83 314.3 408 67.6
Oeu044138.1 Olea europaea HOM05D006571 ORTHO05D007771 1.5e-83 314.3 397 59.7
arahy.Tifrunner.gnm1.ann1.P9WABM Arachis hypogaea HOM05D006571 ORTHO05D007771 3.3e-83 313.2 337 68.5
Sabra07G0024000 Salix brachista HOM05D006571 ORTHO05D007771 5.7e-83 312.4 445 58.2
TPR.G34976 Trifolium pratense HOM05D006571 ORTHO05D007771 9.7e-83 311.6 399 67.7
CARHR160190 Cardamine hirsuta HOM05D006571 ORTHO05D007771 1.7e-82 310.8 406 67.0
Sc03g0000790 Simmondsia chinensis HOM05D006571 ORTHO05D007771 2.8e-82 310.1 408 66.7
Solyc03g034080.4 Solanum lycopersicum HOM05D006571 ORTHO05D007771 2.8e-82 310.1 403 63.0
Manes.01G133900 Manihot esculenta HOM05D006571 ORTHO05D007771 3.7e-82 309.7 406 66.5
Aqoxy6G01074 Aquilegia oxysepala HOM05D006571 ORTHO05D007771 8.2e-82 308.5 409 61.6
Sopen03g006860 Solanum pennellii HOM05D006571 ORTHO05D007771 1.8e-81 307.4 396 66.2
Gohir.D03G015600 Gossypium hirsutum HOM05D006571 ORTHO05D007771 5.3e-81 305.8 299 66.2
Gorai.003G015800 Gossypium raimondii HOM05D006571 ORTHO05D007771 5.3e-81 305.8 299 66.2
Nn1g05052 Nelumbo nucifera HOM05D006571 ORTHO05D007771 2.0e-80 303.9 429 63.2
Ca_22257_v3 Cicer arietinum L. HOM05D006571 ORTHO05D007771 2.6e-80 303.5 370 68.1
CANSAT01G0415 Cannabis sativa HOM05D006571 ORTHO05D007771 1.7e-79 300.8 370 66.2
Hund14147 Selenicereus undatus HOM05D006571 ORTHO05D007771 5.0e-79 299.3 405 67.4
Migut.L00283 Erythranthe guttata HOM05D006571 ORTHO05D007771 1.5e-78 297.7 409 64.8
COL.COLO4_22100 Corchorus olitorius HOM05D006571 ORTHO05D007771 3.2e-78 296.6 207 82.6
Lj4g0016878 Lotus japonicus HOM05D006571 ORTHO05D007771 3.2e-78 296.6 399 63.2
RcHm_v2.0_Chr2g0101911 Rosa chinensis HOM05D006571 ORTHO05D007771 5.5e-78 295.8 412 65.0
FAN23G2572 Fragaria x ananassa HOM05D006571 ORTHO05D007771 1.6e-77 294.3 410 65.1
Carub.0005s1702 Capsella rubella HOM05D006571 ORTHO05D007771 2.1e-77 293.9 410 63.4
HanXRQChr16g0530131 Helianthus annuus HOM05D006571 ORTHO05D007771 2.7e-77 293.5 406 64.8
FvH4_1g13531 Fragaria vesca HOM05D006571 ORTHO05D007771 6.1e-77 292.4 411 64.5
CAN.G1028.5 Capsicum annuum HOM05D006571 ORTHO05D007771 8.0e-77 292.0 405 61.7
FAN26G3136 Fragaria x ananassa HOM05D006571 ORTHO05D007771 5.2e-76 289.3 413 63.9
Aa31LG4G18850 Aethionema arabicum HOM05D006571 ORTHO05D007771 3.3e-75 286.6 409 63.8
SGA_v2.0_scaffold402G50988 Striga asiatica HOM05D006571 ORTHO05D007771 3.3e-75 286.6 357 64.7
AT3G50690 Arabidopsis thaliana HOM05D006571 ORTHO05D007771 1.7e-74 284.3 409 61.4
Lj2P450T8 Lonicera japonica HOM05D006571 ORTHO05D007771 2.8e-74 283.5 353 64.9
MD15G1265000 Malus domestica HOM05D006571 ORTHO05D007771 4.8e-74 282.7 368 67.1
Potri.007G027500 Populus trichocarpa HOM05D006571 ORTHO05D007771 4.8e-74 282.7 411 64.5
MBI16_g37746_MAGBIO Magnolia biondii HOM05D006571 ORTHO05D007771 3.1e-73 280.0 403 63.5
CDE04G1022 Ceratophyllum demersum HOM05D006571 ORTHO05D007771 4.1e-73 279.6 259 66.0
CDE07G0561 Ceratophyllum demersum HOM05D006571 ORTHO05D007771 4.1e-73 279.6 259 65.6
Oeu024877.2 Olea europaea HOM05D006571 ORTHO05D007771 5.3e-73 279.3 465 48.0
THA.LOC104807447 Tarenaya hassleriana HOM05D006571 ORTHO05D007771 1.6e-72 277.7 340 60.6
ECA246G1775 Erigeron canadensis HOM05D006571 ORTHO05D007771 1.7e-71 274.2 228 72.4
Lalb_Chr16g0377891 Lupinus albus HOM05D006571 ORTHO05D007771 8.5e-71 271.9 392 58.4
Peaxi162Scf00751g00044 Petunia axillaris HOM05D006571 ORTHO05D007771 3.6e-69 266.5 207 72.9
ATR0733G171 Amborella trichopoda HOM05D006571 ORTHO05D007771 6.1e-69 265.8 425 57.4
AUR62003170 Chenopodium quinoa HOM05D006571 ORTHO05D007771 1.4e-68 264.6 160 82.5
EL10Ac6g14930 Beta vulgaris HOM05D006571 ORTHO05D007771 5.2e-68 262.7 160 81.9
Hma1.2p1_0066F.1_g036610 Hydrangea macrophylla HOM05D006571 ORTHO05D007771 3.4e-67 260.0 160 75.6
GSVIVG01031937001 Vitis vinifera HOM05D006571 ORTHO05D007771 1.3e-66 258.1 160 78.1
Thhalv10025306m.g Eutrema salsugineum HOM05D006571 ORTHO05D007771 4.1e-65 253.1 210 71.0
TAR628G0135 Trochodendron aralioides HOM05D006571 ORTHO05D007771 1.0e-63 248.4 147 83.0
BcaNung04428 Brassica carinata HOM05D006571 ORTHO05D007771 2.1e-61 240.7 160 72.5
BcaNung00714 Brassica carinata HOM05D006571 ORTHO05D007771 1.8e-60 237.7 160 70.6
C01p02460 Brassica napus HOM05D006571 ORTHO05D007771 1.8e-60 237.7 160 70.6
BolC1t00234H Brassica oleracea HOM05D006571 ORTHO05D007771 1.8e-60 237.7 160 70.6
BraA01t00212Z Brassica rapa HOM05D006571 ORTHO05D007771 1.8e-60 237.7 160 70.6
A01p02240 Brassica napus HOM05D006571 ORTHO05D007771 8.8e-60 235.3 160 70.0
THA.LOC104804229 Tarenaya hassleriana HOM05D006571 ORTHO05D007771 1.5e-59 234.6 159 71.7
Zm00001eb327200 Zea mays HOM05D006571 ORTHO05D007771 9.8e-59 231.9 321 51.7
PSO170G0995 Papaver somniferum HOM05D006571 ORTHO05D007771 3.7e-58 229.9 206 65.5
PSO764G0269 Papaver somniferum HOM05D006571 ORTHO05D007771 5.4e-57 226.1 205 64.4
Mapoly0013s0183 Marchantia polymorpha HOM05D006571 ORTHO05D007771 4.2e-54 216.5 160 67.5
Lj9A368T57 Lonicera japonica HOM05D006571 ORTHO05D007771 4.0e-52 209.9 354 50.6
SMO144G0154 Selaginella moellendorffii HOM05D006571 ORTHO05D007771 2.0e-51 207.6 160 65.0
Pp3c2_24900 Physcomitrium patens HOM05D006571 ORTHO05D007771 1.7e-47 194.5 159 62.9
Pp3c2_24950 Physcomitrium patens HOM05D006571 ORTHO05D007771 1.7e-47 194.5 159 62.9
Pp3c1_12220 Physcomitrium patens HOM05D006571 ORTHO05D007771 1.5e-46 191.4 161 62.7
Pp3c1_12230 Physcomitrium patens HOM05D006571 ORTHO05D007771 1.5e-46 191.4 161 62.7
AUR62007988 Chenopodium quinoa HOM05D006571 ORTHO05D007771 4.1e-41 173.3 357 59.4
SEGI_17530 Sequoiadendron giganteum HOM05D006571 ORTHO05D007771 1.5e-38 164.9 152 58.6
Zm00001eb217610 Zea mays HOM05D006571 ORTHO05D007771 1.5e-30 138.3 162 50.0
Zm00001eb052260 Zea mays HOM05D006571 ORTHO05D007771 2.7e-24 117.5 162 43.2
Os03g0668900 Oryza sativa ssp. japonica HOM05D006571 ORTHO05D007771 4.6e-24 116.7 161 42.9
Cre08.g363700 Chlamydomonas reinhardtii HOM05D006571 ORTHO05D007771 7.3e-22 109.4 158 43.7
Zm00001eb205800 Zea mays HOM05D006571 ORTHO05D007771 4.6e-16 90.1 139 41.0
Oeu000712.1 Olea europaea HOM05D006571 ORTHO05D007771 3.9e-15 87.0 57 73.7
MCO02G270 Micromonas commoda HOM05D006571 ORTHO05D007771 1.7e-10 71.6 111 39.6
Zm00001eb386610 Zea mays HOM05D006571 ORTHO05D007771 2.4e-09 67.8 95 43.2
Cre16.g679600 Chlamydomonas reinhardtii HOM05D005498 ORTHO05D006719 8.7e-07 59.3 109 35.8
Actinidia02775 Actinidia chinensis HOM05D006571 ORTHO05D007771 1.9e-06 58.2 133 39.1
Zm00001eb426950 Zea mays HOM05D022938 ORTHO05D007771 5.6e-06 56.6 82 42.7
Nitab4.5_0001038g0160 Nicotiana tabacum HOM05D006571 ORTHO05D007771 7.3e-06 56.2 87 69.0


User provided reference genes

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