Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0027898 Camellia sinensis var. sinensis HOM05D006773 ORTHO05D008775 1.7e-102 375.9 182 100.0
Actinidia16591 Actinidia chinensis HOM05D006773 ORTHO05D008775 6.5e-70 267.7 182 74.7
Dinv25798 Davidia involucrata HOM05D006773 ORTHO05D008775 7.2e-69 264.2 183 75.4
GSVIVG01010018001 Vitis vinifera HOM05D006773 ORTHO05D008775 7.5e-66 254.2 186 72.0
TAR625G1315 Trochodendron aralioides HOM05D006773 ORTHO05D008775 2.2e-65 252.7 191 70.2
Cfa018374 Carpinus fangiana HOM05D006773 ORTHO05D008775 3.5e-63 245.4 182 71.4
vmacro00729 Vaccinium macrocarpon HOM05D006773 ORTHO05D008775 4.5e-63 245.0 192 70.8
Prupe.8G017800 Prunus persica HOM05D006773 ORTHO05D008775 1.0e-62 243.8 155 79.4
CiPaw.15G022300 Carya illinoinensis HOM05D006773 ORTHO05D008775 2.9e-62 242.3 182 70.9
MSTRG.22383 Avicennia marina HOM05D006773 ORTHO05D008775 2.5e-61 239.2 182 66.5
RcHm_v2.0_Chr6g0277361 Rosa chinensis HOM05D006773 ORTHO05D008775 5.6e-61 238.0 177 67.2
QL09p028661 Quercus lobata HOM05D006773 ORTHO05D008775 9.5e-61 237.3 182 69.2
Manes.02G174300 Manihot esculenta HOM05D006773 ORTHO05D008775 1.2e-60 236.9 183 68.9
Potri.002G072400 Populus trichocarpa HOM05D006773 ORTHO05D008775 1.0e-59 233.8 181 66.9
Duzib093G1219 Durio zibethinus HOM05D006773 ORTHO05D008775 2.3e-59 232.6 200 65.5
FvH4_2g14791 Fragaria vesca HOM05D006773 ORTHO05D008775 6.8e-59 231.1 183 65.6
MD10G1012400 Malus domestica HOM05D006773 ORTHO05D008775 6.8e-59 231.1 159 73.6
Gohir.D02G073400 Gossypium hirsutum HOM05D006773 ORTHO05D008775 8.9e-59 230.7 183 67.2
CANSAT25G3413 Cannabis sativa HOM05D006773 ORTHO05D008775 2.0e-58 229.6 185 64.3
Sabra02G0057000 Salix brachista HOM05D006773 ORTHO05D008775 2.0e-58 229.6 182 65.4
Haze_17696 Corylus avellana HOM05D006773 ORTHO05D005980 2.6e-58 229.2 162 74.7
MD05G1012500 Malus domestica HOM05D006773 ORTHO05D008775 2.6e-58 229.2 184 66.8
Gohir.A02G067200 Gossypium hirsutum HOM05D006773 ORTHO05D008775 4.4e-58 228.4 183 66.7
Gorai.005G082800 Gossypium raimondii HOM05D006773 ORTHO05D008775 4.4e-58 228.4 183 66.7
Lj7C363G2 Lonicera japonica HOM05D006773 ORTHO05D008775 9.8e-58 227.3 185 68.1
Thecc.08G143200 Theobroma cacao HOM05D006773 ORTHO05D008775 1.3e-57 226.9 185 67.0
CAN.G2.47 Capsicum annuum HOM05D006773 ORTHO05D008775 1.7e-57 226.5 177 65.0
Ciclev10002228m.g Citrus clementina HOM05D006773 ORTHO05D008775 1.7e-57 226.5 182 66.5
FAN15G2829 Fragaria x ananassa HOM05D006773 ORTHO05D008775 1.1e-56 223.8 184 62.5
TWI60G1234 Tripterygium wilfordii HOM05D006773 ORTHO05D008775 1.8e-56 223.0 180 67.8
Atru.chr13.1690 Acer truncatum HOM05D006773 ORTHO05D008775 4.1e-56 221.9 133 82.0
Oeu025718.1 Olea europaea HOM05D006773 ORTHO05D008775 5.4e-56 221.5 140 77.1
Eucgr.F02746 Eucalyptus grandis HOM05D006773 ORTHO05D008775 1.2e-55 220.3 186 65.1
Nitab4.5_0000445g0090 Nicotiana tabacum HOM05D006773 ORTHO05D008775 1.2e-55 220.3 175 63.4
THA.LOC104813693 Tarenaya hassleriana HOM05D006773 ORTHO05D008775 3.5e-55 218.8 128 82.0
Peaxi162Scf00263g00028 Petunia axillaris HOM05D006773 ORTHO05D008775 5.9e-55 218.0 177 62.1
Solyc04g064670.3 Solanum lycopersicum HOM05D006773 ORTHO05D008775 1.0e-54 217.2 176 63.1
PSO675G5006 Papaver somniferum HOM05D006773 ORTHO05D008775 1.3e-54 216.9 151 73.5
PSO541G0390 Papaver somniferum HOM05D006773 ORTHO05D008775 3.0e-54 215.7 125 83.2
ECA246G0400 Erigeron canadensis HOM05D006773 ORTHO05D005980 5.0e-54 214.9 154 68.2
FAN24G0253 Fragaria x ananassa HOM05D006773 ORTHO05D005980 5.0e-54 214.9 183 63.4
Nitab4.5_0004095g0010 Nicotiana tabacum HOM05D006773 ORTHO05D008775 6.6e-54 214.5 175 62.3
DCAR_031498 Daucus carota HOM05D006773 ORTHO05D008775 8.6e-54 214.2 181 61.9
ClCG09G009710 Citrullus lanatus HOM05D006773 ORTHO05D008775 1.5e-53 213.4 128 80.5
Lsat_1_v5_gn_6_96860 Lactuca sativa HOM05D006773 ORTHO05D008775 1.5e-53 213.4 117 85.5
AL2G37260 Arabidopsis lyrata HOM05D006773 ORTHO05D008775 1.9e-53 213.0 159 67.9
Glyma.06G122400 Glycine max HOM05D006773 ORTHO05D008775 2.5e-53 212.6 182 61.5
Thhalv10019004m.g Eutrema salsugineum HOM05D006773 ORTHO05D008775 5.6e-53 211.5 161 66.5
CARHR070570 Cardamine hirsuta HOM05D006773 ORTHO05D008775 7.3e-53 211.1 120 82.5
Carub.0002s2397 Capsella rubella HOM05D006773 ORTHO05D008775 1.6e-52 209.9 120 81.7
COL.COLO4_33185 Corchorus olitorius HOM05D006773 ORTHO05D008775 1.6e-52 209.9 183 66.1
MELO3C023682.2 Cucumis melo HOM05D006773 ORTHO05D008775 2.1e-52 209.5 182 63.2
Aa31LG4G7120 Aethionema arabicum HOM05D006773 ORTHO05D008775 3.6e-52 208.8 120 82.5
BraA07t31788Z Brassica rapa HOM05D006773 ORTHO05D008775 3.6e-52 208.8 122 83.6
Sp5g32210 Schrenkiella parvula HOM05D006773 ORTHO05D008775 3.6e-52 208.8 181 61.3
Cc10_g12990 Coffea canephora HOM05D006773 ORTHO05D008775 4.7e-52 208.4 181 61.3
Phvul.009G134500 Phaseolus vulgaris HOM05D006773 ORTHO05D008775 6.2e-52 208.0 177 63.8
VMungo1309G1948 Vigna mungo HOM05D006773 ORTHO05D008775 8.0e-52 207.6 179 65.4
A07p42660 Brassica napus HOM05D006773 ORTHO05D008775 1.0e-51 207.2 122 83.6
CsaV3_7G025030 Cucumis sativus L. HOM05D006773 ORTHO05D008775 1.0e-51 207.2 119 84.0
arahy.Tifrunner.gnm1.ann1.85NLUF Arachis hypogaea HOM05D006773 ORTHO05D008775 1.8e-51 206.5 185 58.9
Rhsim09G0002200 Rhododendron simsii HOM05D006773 ORTHO05D008775 1.8e-51 206.5 107 90.7
TPR.G18761 Trifolium pratense HOM05D006773 ORTHO05D008775 1.8e-51 206.5 138 75.4
BcaC08g47206 Brassica carinata HOM05D006773 ORTHO05D008775 3.1e-51 205.7 122 82.8
C06p51250 Brassica napus HOM05D006773 ORTHO05D008775 3.1e-51 205.7 122 82.8
HanXRQChr05g0160801 Helianthus annuus HOM05D006773 ORTHO05D008775 3.1e-51 205.7 131 77.1
Medtr3g089890 Medicago truncatula HOM05D006773 ORTHO05D008775 4.0e-51 205.3 151 70.9
AT1G77090 Arabidopsis thaliana HOM05D006773 ORTHO05D008775 5.2e-51 204.9 120 82.5
Psat5g080880 Pisum sativum HOM05D006773 ORTHO05D008775 6.8e-51 204.5 177 61.0
Glyma.04G241000 Glycine max HOM05D006773 ORTHO05D008775 2.0e-50 203.0 124 79.8
EL10Ac1g01469 Beta vulgaris HOM05D006773 ORTHO05D008775 2.6e-50 202.6 181 58.0
Cpa.g.sc49.74 Carica papaya HOM05D006773 ORTHO05D008775 3.4e-50 202.2 122 79.5
Migut.N03240 Erythranthe guttata HOM05D006773 ORTHO05D008775 4.4e-50 201.8 121 78.5
ATR1136G180 Amborella trichopoda HOM05D006773 ORTHO05D008775 5.8e-50 201.4 119 80.7
Lalb_Chr08g0240801 Lupinus albus HOM05D006773 ORTHO05D008775 7.5e-50 201.1 119 82.4
Ca_16660_v3 Cicer arietinum L. HOM05D006773 ORTHO05D008775 1.3e-49 200.3 118 83.1
PGSC0003DMG401024815 Solanum tuberosum HOM05D006773 ORTHO05D008775 1.3e-49 200.3 122 77.0
Thhalv10000289m.g Eutrema salsugineum HOM05D006773 ORTHO05D008775 1.7e-49 199.9 164 65.2
FAN06G4159 Fragaria x ananassa HOM05D006773 ORTHO05D008775 3.7e-49 198.7 183 59.6
PGR042G0338 Punica granatum HOM05D006773 ORTHO05D008775 9.2e-48 194.1 198 58.6
Atru.BG.245.p Acer truncatum HOM05D006773 ORTHO05D008775 2.0e-47 193.0 136 72.1
Sc20g0003340 Simmondsia chinensis HOM05D006773 ORTHO05D008775 2.7e-47 192.6 122 76.2
HPP92_004476 Vanilla planifolia HOM05D006773 ORTHO05D008775 2.7e-47 192.6 158 62.7
Ah.16g108660 Amaranthus hybridus HOM05D006773 ORTHO05D008775 4.6e-47 191.8 138 69.6
AUR62026790 Chenopodium quinoa HOM05D006773 ORTHO05D008775 6.0e-47 191.4 126 75.4
FvH4_7g25010 Fragaria vesca HOM05D006773 ORTHO05D008775 7.8e-47 191.0 137 71.5
AUR62013482 Chenopodium quinoa HOM05D006773 ORTHO05D008775 1.0e-46 190.7 125 77.6
SalBow6G0822 Salvia bowleyana HOM05D006773 ORTHO05D008775 8.6e-46 187.6 143 69.2
Hund17393 Selenicereus undatus HOM05D006773 ORTHO05D008775 3.3e-45 185.7 131 71.8
Os12g0190200 Oryza sativa ssp. japonica HOM05D006773 ORTHO05D008775 1.2e-44 183.7 128 68.8
PSO017G5067 Papaver somniferum HOM05D006773 ORTHO05D008775 1.6e-44 183.3 110 80.0
MBI06_g35966_MAGBIO Magnolia biondii HOM05D006773 ORTHO05D008775 6.2e-44 181.4 99 85.9
SEGI_34187 Sequoiadendron giganteum HOM05D006773 ORTHO05D008775 3.0e-38 162.5 105 73.3
Pp3c1_24790 Physcomitrium patens HOM05D006773 ORTHO05D008775 1.1e-37 160.6 132 58.3
Mapoly0002s0218 Marchantia polymorpha HOM05D006773 ORTHO05D008775 2.1e-36 156.4 121 64.5
SGA_v2.0_scaffold19G08634 Striga asiatica HOM05D006773 ORTHO05D008775 3.6e-36 155.6 80 88.8
MBI06_g41413_MAGBIO Magnolia biondii HOM05D006773 ORTHO05D008775 1.4e-35 153.7 311 35.4
AagrBONN_evm.TU.Sc2ySwM_344.1575 Anthoceros agrestis HOM05D006773 ORTHO05D008775 2.3e-35 152.9 91 80.2
Sed0012245 Sechium edule HOM05D006773 ORTHO05D008775 6.8e-35 151.4 76 90.8
Nn5g28592 Nelumbo nucifera HOM05D006773 ORTHO05D008775 1.5e-34 150.2 75 90.7
arahy.Tifrunner.gnm1.ann1.61R3GI Arachis hypogaea HOM05D006773 ORTHO05D008775 8.4e-33 144.4 75 84.0
unitig_52.g17539 Utricularia gibba HOM05D006773 ORTHO05D008775 1.9e-32 143.3 72 88.9
Sopen04g026630 Solanum pennellii HOM05D006773 ORTHO05D008775 5.1e-30 135.2 72 83.3
Cre03.g198950 Chlamydomonas reinhardtii HOM05D006773 ORTHO05D008775 8.6e-30 134.4 168 46.4
Hma1.2p1_1563F.1_g290820 Hydrangea macrophylla HOM05D006773 ORTHO05D008775 7.3e-29 131.3 74 85.1
SMO270G0074 Selaginella moellendorffii HOM05D006773 ORTHO05D008775 7.3e-29 131.3 73 80.8
MCO01G018 Micromonas commoda HOM05D006773 ORTHO05D008775 1.7e-25 120.2 112 55.4
HPP92_004480 Vanilla planifolia HOM05D006773 ORTHO05D008775 4.9e-25 118.6 108 58.3
PRCOL_00003420 Prasinoderma coloniale HOM05D006773 ORTHO05D008775 1.6e-23 113.6 130 46.9
SMO367G0103 Selaginella moellendorffii HOM05D006773 ORTHO05D008775 3.2e-08 62.8 39 69.2
Pp3c2_15810 Physcomitrium patens HOM05D006773 ORTHO05D316139 1.8e-06 57.0 112 37.5


User provided reference genes

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