Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0027821 Camellia sinensis var. sinensis HOM05D004063 ORTHO05D005326 5.8e-115 417.5 208 100.0
CSS0047740 Camellia sinensis var. sinensis HOM05D004063 ORTHO05D005326 1.8e-92 342.8 248 75.0
Dinv05531 Davidia involucrata HOM05D004063 ORTHO05D005326 3.4e-91 338.6 247 74.9
Hma1.2p1_0157F.1_g069400 Hydrangea macrophylla HOM05D004063 ORTHO05D005326 8.5e-90 334.0 243 72.4
Actinidia37921 Actinidia chinensis HOM05D004063 ORTHO05D005326 9.4e-89 330.5 243 73.7
PSO063G2900 Papaver somniferum HOM05D004063 ORTHO05D005326 9.4e-89 330.5 244 70.5
PSO832G0952 Papaver somniferum HOM05D004063 ORTHO05D005326 9.4e-89 330.5 244 70.5
SalBow7G2995 Salvia bowleyana HOM05D004063 ORTHO05D005326 2.7e-88 328.9 237 73.0
Hund14546 Selenicereus undatus HOM05D004063 ORTHO05D005326 3.6e-88 328.6 244 71.3
Thecc.08G059500 Theobroma cacao HOM05D004063 ORTHO05D005326 3.6e-88 328.6 241 71.8
HanXRQChr15g0492711 Helianthus annuus HOM05D004063 ORTHO05D005326 4.7e-88 328.2 240 71.7
CiPaw.07G138500 Carya illinoinensis HOM05D004063 ORTHO05D005326 2.3e-87 325.9 236 73.3
SalBow5G0233 Salvia bowleyana HOM05D004063 ORTHO05D005326 2.3e-87 325.9 235 72.8
SalBow5G1556 Salvia bowleyana HOM05D004063 ORTHO05D005326 2.3e-87 325.9 235 72.8
SalBow5G2247 Salvia bowleyana HOM05D004063 ORTHO05D005326 2.3e-87 325.9 235 72.8
Ca_26048_v3 Cicer arietinum L. HOM05D004063 ORTHO05D005326 3.0e-87 325.5 240 70.4
Lalb_Chr05g0218721 Lupinus albus HOM05D004063 ORTHO05D005326 6.7e-87 324.3 241 70.1
Oeu000693.1 Olea europaea HOM05D004063 ORTHO05D005326 6.7e-87 324.3 245 70.6
DCAR_003678 Daucus carota HOM05D004063 ORTHO05D005326 8.8e-87 323.9 243 70.8
Lalb_Chr16g0384201 Lupinus albus HOM05D004063 ORTHO05D005326 8.8e-87 323.9 243 68.7
Manes.10G039800 Manihot esculenta HOM05D004063 ORTHO05D005326 8.8e-87 323.9 242 69.8
Oeu007480.1 Olea europaea HOM05D004063 ORTHO05D005326 8.8e-87 323.9 244 70.5
Psat7g118640 Pisum sativum HOM05D004063 ORTHO05D005326 8.8e-87 323.9 238 69.3
Cc00_g23370 Coffea canephora HOM05D004063 ORTHO05D005326 1.1e-86 323.6 241 70.5
MELO3C017019.2 Cucumis melo HOM05D004063 ORTHO05D005326 1.1e-86 323.6 238 71.0
FAN08G1355 Fragaria x ananassa HOM05D004063 ORTHO05D005326 1.1e-86 323.6 238 71.8
Glyma.13G171700 Glycine max HOM05D004063 ORTHO05D005326 1.1e-86 323.6 238 71.4
Gorai.002G116900 Gossypium raimondii HOM05D004063 ORTHO05D005326 1.1e-86 323.6 236 72.0
TPR.G34273 Trifolium pratense HOM05D004063 ORTHO05D005326 1.1e-86 323.6 247 68.8
QL02p014238 Quercus lobata HOM05D004063 ORTHO05D005326 1.5e-86 323.2 235 72.8
Glyma.07G204400 Glycine max HOM05D004063 ORTHO05D005326 2.0e-86 322.8 241 70.1
FAN13G1863 Fragaria x ananassa HOM05D004063 ORTHO05D005326 2.6e-86 322.4 238 71.8
HanXRQChr05g0144881 Helianthus annuus HOM05D004063 ORTHO05D005326 2.6e-86 322.4 235 71.9
COL.COLO4_38533 Corchorus olitorius HOM05D004063 ORTHO05D005326 3.3e-86 322.0 238 70.6
Gohir.D02G100300 Gossypium hirsutum HOM05D004063 ORTHO05D005326 3.3e-86 322.0 243 69.5
Lj4g0024263 Lotus japonicus HOM05D004063 ORTHO05D005326 3.3e-86 322.0 247 69.6
Phvul.003G057700 Phaseolus vulgaris HOM05D004063 ORTHO05D005326 3.3e-86 322.0 247 70.0
Prupe.5G135600 Prunus persica HOM05D004063 ORTHO05D005326 3.3e-86 322.0 236 72.5
RcHm_v2.0_Chr7g0187901 Rosa chinensis HOM05D004063 ORTHO05D005326 3.3e-86 322.0 238 72.7
Eucgr.F01769 Eucalyptus grandis HOM05D004063 ORTHO05D005326 4.4e-86 321.6 235 72.8
Gohir.D01G091800 Gossypium hirsutum HOM05D004063 ORTHO05D005326 4.4e-86 321.6 236 71.2
Cfa000095 Carpinus fangiana HOM05D004063 ORTHO05D005326 5.7e-86 321.2 232 72.8
Gohir.A01G105500 Gossypium hirsutum HOM05D004063 ORTHO05D005326 5.7e-86 321.2 236 71.6
FAN18G2216 Fragaria x ananassa HOM05D004063 ORTHO05D005326 7.4e-86 320.9 238 71.8
TPR.G16276 Trifolium pratense HOM05D004063 ORTHO05D005326 7.4e-86 320.9 243 68.3
FvH4_5g10320 Fragaria vesca HOM05D004063 ORTHO05D005326 9.7e-86 320.5 238 71.8
FAN04G0504 Fragaria x ananassa HOM05D004063 ORTHO05D005326 9.7e-86 320.5 238 71.4
TWI36G0802 Tripterygium wilfordii HOM05D004063 ORTHO05D005326 9.7e-86 320.5 243 69.1
Lsat_1_v5_gn_9_45181 Lactuca sativa HOM05D004063 ORTHO05D005326 1.3e-85 320.1 240 70.0
MD06G1125000 Malus domestica HOM05D004063 ORTHO05D005326 1.7e-85 319.7 236 71.6
Atru.chr13.138 Acer truncatum HOM05D004063 ORTHO05D005326 2.2e-85 319.3 238 70.6
BcaC05g25963 Brassica carinata HOM05D004063 ORTHO05D005326 2.2e-85 319.3 247 66.8
C05p19140 Brassica napus HOM05D004063 ORTHO05D005326 2.2e-85 319.3 247 66.8
CAN.G311.117 Capsicum annuum HOM05D004063 ORTHO05D005326 2.2e-85 319.3 237 70.0
Haze_22784 Corylus avellana HOM05D004063 ORTHO05D005326 2.2e-85 319.3 237 71.7
Peaxi162Scf00893g00009 Petunia axillaris HOM05D004063 ORTHO05D005326 2.2e-85 319.3 238 70.2
Potri.002G010300 Populus trichocarpa HOM05D004063 ORTHO05D005326 2.2e-85 319.3 240 70.4
Sopen04g035990 Solanum pennellii HOM05D004063 ORTHO05D005326 2.2e-85 319.3 237 70.5
Aqoxy5G01076 Aquilegia oxysepala HOM05D004063 ORTHO05D005326 2.8e-85 318.9 238 70.2
Migut.C00386 Erythranthe guttata HOM05D004063 ORTHO05D005326 2.8e-85 318.9 243 69.1
SGA_v2.0_scaffold82G26227 Striga asiatica HOM05D004063 ORTHO05D005326 2.8e-85 318.9 239 69.9
CsaV3_4G037210 Cucumis sativus L. HOM05D004063 ORTHO05D005326 3.7e-85 318.5 238 69.3
Sabra05G0194100 Salix brachista HOM05D001348 ORTHO05D002788 3.7e-85 318.5 243 69.1
GSVIVG01008672001 Vitis vinifera HOM05D004063 ORTHO05D005326 3.7e-85 318.5 247 69.6
C07p22960 Brassica napus HOM05D004063 ORTHO05D005326 4.8e-85 318.2 247 67.2
Gorai.005G113700 Gossypium raimondii HOM05D004063 ORTHO05D005326 4.8e-85 318.2 238 70.2
Duzib116G0298 Durio zibethinus HOM05D004063 ORTHO05D005326 6.3e-85 317.8 238 70.2
Gohir.A02G084400 Gossypium hirsutum HOM05D004063 ORTHO05D005326 6.3e-85 317.8 238 69.7
Solyc04g082390.3 Solanum lycopersicum HOM05D004063 ORTHO05D005326 6.3e-85 317.8 237 70.0
PGSC0003DMG400009980 Solanum tuberosum HOM05D004063 ORTHO05D005326 6.3e-85 317.8 237 70.0
THA.LOC104809761 Tarenaya hassleriana HOM05D004063 ORTHO05D005326 6.3e-85 317.8 247 67.6
AUR62039603 Chenopodium quinoa HOM05D004063 ORTHO05D005326 8.2e-85 317.4 239 69.9
Thhalv10008599m.g Eutrema salsugineum HOM05D004063 ORTHO05D005326 8.2e-85 317.4 247 67.2
Sabra02G0007700 Salix brachista HOM05D004063 ORTHO05D005326 8.2e-85 317.4 249 68.3
arahy.Tifrunner.gnm1.ann1.T45K83 Arachis hypogaea HOM05D004063 ORTHO05D005326 1.1e-84 317.0 237 70.5
A07p15610 Brassica napus HOM05D004063 ORTHO05D005326 1.4e-84 316.6 246 67.5
CANSAT21G0854 Cannabis sativa HOM05D004063 ORTHO05D005326 1.4e-84 316.6 236 70.8
PGR083G1742 Punica granatum HOM05D004063 ORTHO05D005326 1.4e-84 316.6 247 68.8
AL1G33510 Arabidopsis lyrata HOM05D004063 ORTHO05D005326 1.8e-84 316.2 247 66.4
MSTRG.978 Avicennia marina HOM05D004063 ORTHO05D005326 1.8e-84 316.2 240 68.3
Duzib093G1691 Durio zibethinus HOM05D004063 ORTHO05D005326 1.8e-84 316.2 240 70.4
CARHR021040 Cardamine hirsuta HOM05D004063 ORTHO05D005326 2.4e-84 315.8 247 66.4
Potri.005G250900 Populus trichocarpa HOM05D004063 ORTHO05D005326 2.4e-84 315.8 238 70.2
AT1G20575 Arabidopsis thaliana HOM05D004063 ORTHO05D005326 3.1e-84 315.5 247 66.0
arahy.Tifrunner.gnm1.ann1.YJK3BU Arachis hypogaea HOM05D004063 ORTHO05D005326 3.1e-84 315.5 247 68.8
EL10Ac4g08397 Beta vulgaris HOM05D004063 ORTHO05D005326 4.1e-84 315.1 242 68.2
BcaB03g14313 Brassica carinata HOM05D004063 ORTHO05D005326 4.1e-84 315.1 252 65.1
BolC7t42835H Brassica oleracea HOM05D004063 ORTHO05D005326 5.3e-84 314.7 242 67.8
AUR62019619 Chenopodium quinoa HOM05D004063 ORTHO05D005326 5.3e-84 314.7 239 68.6
unitig_22.g5884 Utricularia gibba HOM05D004063 ORTHO05D005326 5.3e-84 314.7 240 67.9
BcaB07g32056 Brassica carinata HOM05D004063 ORTHO05D005326 7.0e-84 314.3 238 68.9
BraA07t29300Z Brassica rapa HOM05D004063 ORTHO05D005326 1.2e-83 313.5 246 67.1
ATR0693G211 Amborella trichopoda HOM05D004063 ORTHO05D005326 2.0e-83 312.8 247 65.6
Sp1g18280 Schrenkiella parvula HOM05D004063 ORTHO05D005326 3.5e-83 312.0 241 67.6
arahy.Tifrunner.gnm1.ann1.G5WY8I Arachis hypogaea HOM05D001447 ORTHO05D005061 5.9e-83 311.2 233 70.0
RhsimUnG0172300 Rhododendron simsii HOM05D004063 ORTHO05D005326 5.9e-83 311.2 272 65.4
Os03g0824400 Oryza sativa ssp. japonica HOM05D004063 ORTHO05D005326 1.3e-82 310.1 236 66.5
vmacro17869 Vaccinium macrocarpon HOM05D004063 ORTHO05D005326 1.3e-82 310.1 262 67.2
Carub.0001s2006 Capsella rubella HOM05D004063 ORTHO05D005326 1.7e-82 309.7 247 64.8
Zm00001eb062940 Zea mays HOM05D004063 ORTHO05D005326 5.0e-82 308.1 239 66.9
ClCG11G018680 Citrullus lanatus HOM05D004063 ORTHO05D005326 1.1e-81 307.0 266 63.2
Medtr4g087885 Medicago truncatula HOM05D004063 ORTHO05D005326 1.5e-81 306.6 279 60.9
CDE05G0379 Ceratophyllum demersum HOM05D004063 ORTHO05D005326 3.2e-81 305.4 214 72.9
HPP92_006203 Vanilla planifolia HOM05D004063 ORTHO05D005326 4.2e-81 305.1 237 67.5
Ciclev10003501m.g Citrus clementina HOM05D004063 ORTHO05D005326 2.3e-79 299.3 243 65.4
Aa31LG7G4830 Aethionema arabicum HOM05D004063 ORTHO05D005326 3.0e-79 298.9 223 68.2
MBI08_g37091_MAGBIO Magnolia biondii HOM05D004063 ORTHO05D005326 1.7e-77 293.1 245 64.9
Cc02_g33840 Coffea canephora HOM05D004063 ORTHO05D005326 2.4e-76 289.3 241 65.6
CDE05G0316 Ceratophyllum demersum HOM05D004063 ORTHO05D005326 7.0e-76 287.7 225 65.8
Rhsim01G0045200 Rhododendron simsii HOM05D004063 ORTHO05D005326 1.1e-73 280.4 207 73.9
Nitab4.5_0000588g0070 Nicotiana tabacum HOM05D004063 ORTHO05D005326 8.0e-72 274.2 339 49.3
Medtr2g097220 Medicago truncatula HOM05D004063 ORTHO05D005326 4.4e-70 268.5 207 68.1
Pp3c13_6200 Physcomitrium patens HOM05D004063 ORTHO05D005326 7.5e-70 267.7 247 58.3
Mapoly0048s0015 Marchantia polymorpha HOM05D004063 ORTHO05D005326 4.8e-69 265.0 245 57.6
Haze_06929 Corylus avellana HOM05D004063 ORTHO05D005326 6.3e-69 264.6 203 69.5
Haze_06936 Corylus avellana HOM05D004063 ORTHO05D005326 6.3e-69 264.6 203 69.5
SMO147G0209 Selaginella moellendorffii HOM05D004063 ORTHO05D005326 2.7e-67 259.2 234 57.3
Sc15g0004420 Simmondsia chinensis HOM05D004063 ORTHO05D005326 4.5e-67 258.5 143 84.6
BolC5t30614H Brassica oleracea HOM05D004063 ORTHO05D005326 3.8e-66 255.4 202 66.3
Psat5g286640 Pisum sativum HOM05D004063 ORTHO05D005326 1.1e-65 253.8 150 80.0
CBR_g50625 Chara braunii HOM05D004063 ORTHO05D005326 1.5e-65 253.4 238 55.9
Ah.04g164080 Amaranthus hybridus HOM05D004150 ORTHO05D005087 7.2e-65 251.1 207 65.2
Nn6g31864 Nelumbo nucifera HOM05D004063 ORTHO05D005326 2.1e-64 249.6 143 84.6
SalBow5G2049 Salvia bowleyana HOM05D004063 ORTHO05D005326 4.7e-64 248.4 235 60.0
Lj4A11G65 Lonicera japonica HOM05D004063 ORTHO05D005326 6.1e-64 248.1 263 56.7
SEGI_30145 Sequoiadendron giganteum HOM05D004063 ORTHO05D005326 3.0e-63 245.7 206 64.1
CBR_g19920 Chara braunii HOM05D004063 ORTHO05D005326 4.0e-63 245.4 240 54.6
TAR376G1187 Trochodendron aralioides HOM05D004063 ORTHO05D005326 4.0e-63 245.4 146 83.6
Manes.12G151825 Manihot esculenta HOM05D004063 ORTHO05D005326 9.8e-62 240.7 145 77.9
COL.COLO4_05219 Corchorus olitorius HOM05D004063 ORTHO05D005326 2.8e-61 239.2 222 61.7
Cfa014082 Carpinus fangiana HOM05D004063 ORTHO05D005326 7.8e-59 231.1 141 80.9
ECA232G2837 Erigeron canadensis HOM05D004063 ORTHO05D005326 1.0e-58 230.7 190 63.7
A06p16570 Brassica napus HOM05D004063 ORTHO05D005326 1.3e-58 230.3 245 55.1
BraA06t24763Z Brassica rapa HOM05D004063 ORTHO05D005326 3.8e-58 228.8 206 61.2
MCO11G313 Micromonas commoda HOM05D004063 ORTHO05D005326 2.5e-57 226.1 237 53.6
arahy.Tifrunner.gnm1.ann1.T0MTDZ Arachis hypogaea HOM05D004063 ORTHO05D005326 7.3e-57 224.6 186 65.6
SalBow5G0394 Salvia bowleyana HOM05D004063 ORTHO05D005326 1.6e-56 223.4 268 51.9
Dinv31945 Davidia involucrata HOM05D004063 ORTHO05D005326 3.1e-55 219.2 174 68.4
PRCOL_00004250 Prasinoderma coloniale HOM05D004063 ORTHO05D005326 1.3e-53 213.8 236 51.3
Cfa026140 Carpinus fangiana HOM05D004063 ORTHO05D005326 3.7e-53 212.2 236 50.0
Sed0026987 Sechium edule HOM05D004063 ORTHO05D005326 8.3e-53 211.1 174 65.5
Cre03.g150950 Chlamydomonas reinhardtii HOM05D004063 ORTHO05D005326 2.3e-47 193.0 241 45.6
SalBow5G4311 Salvia bowleyana HOM05D004063 ORTHO05D005326 4.4e-46 188.7 184 58.2
SalBow5G5369 Salvia bowleyana HOM05D004063 ORTHO05D005326 7.0e-44 181.4 100 85.0
Haze_27556 Corylus avellana HOM05D004063 ORTHO05D005326 1.6e-40 170.2 200 47.5
AagrBONN_evm.TU.Sc2ySwM_117.93 Anthoceros agrestis HOM05D004063 ORTHO05D005326 1.6e-35 153.7 97 75.3
Cc07_g21130 Coffea canephora HOM05D004063 ORTHO05D005326 9.9e-30 134.4 79 81.0
Cpa.g.sc801.1 Carica papaya HOM05D004063 ORTHO05D005326 2.9e-29 132.9 203 41.9
MBI08_g41353_MAGBIO Magnolia biondii HOM05D004063 ORTHO05D005326 1.6e-24 117.1 133 55.6
ATR0219G025 Amborella trichopoda HOM05D004063 ORTHO05D005326 4.7e-24 115.5 80 68.8
Cc07_g21170 Coffea canephora HOM05D004063 ORTHO05D005326 2.2e-21 106.7 55 89.1
arahy.Tifrunner.gnm1.ann1.N6YLHX Arachis hypogaea HOM05D004063 ORTHO05D005326 3.8e-21 105.9 66 75.8
arahy.Tifrunner.gnm1.ann1.ND9UIP Arachis hypogaea HOM05D004063 ORTHO05D013367 4.9e-21 105.5 123 51.2
arahy.Tifrunner.gnm1.ann1.SDYE8W Arachis hypogaea HOM05D004063 ORTHO05D013367 4.9e-21 105.5 123 51.2
arahy.Tifrunner.gnm1.ann1.RK3M4K Arachis hypogaea HOM05D004063 ORTHO05D001221 6.4e-21 105.1 123 51.2
Rhsim06G0007000 Rhododendron simsii HOM05D004063 ORTHO05D005326 1.4e-20 104.0 185 40.5
Cpa.g.c43717 Carica papaya HOM05D004063 ORTHO05D005326 3.5e-19 99.4 111 52.3
arahy.Tifrunner.gnm1.ann1.Z2LGXF Arachis hypogaea HOM05D004063 ORTHO05D013367 1.0e-18 97.8 131 48.9
Rhsim13G0010800 Rhododendron simsii HOM05D000068 ORTHO05D000084 1.3e-16 90.9 89 58.4
Cc07_g21180 Coffea canephora HOM05D004063 ORTHO05D005326 1.4e-15 87.4 47 89.4
arahy.Tifrunner.gnm1.ann1.WN1LH4 Arachis hypogaea HOM05D004063 ORTHO05D005326 4.2e-12 75.9 93 52.7
arahy.Tifrunner.gnm1.ann1.T1UNZ1 Arachis hypogaea HOM05D004063 ORTHO05D005326 1.3e-10 70.9 124 42.7
TAR381G0210 Trochodendron aralioides HOM05D004063 ORTHO05D005326 1.3e-10 70.9 139 40.3
SalBow5G1940 Salvia bowleyana HOM05D009895 ORTHO05D022408 6.2e-08 62.0 31 90.3
SalBow5G3904 Salvia bowleyana HOM05D004063 ORTHO05D005326 6.2e-08 62.0 29 96.6
SalBow5G4685 Salvia bowleyana HOM05D009895 ORTHO05D022408 6.2e-08 62.0 31 90.3
Oeu037745.1 Olea europaea HOM05D004063 ORTHO05D005326 1.1e-07 61.2 36 77.8
AagrBONN_evm.TU.Sc2ySwM_228.1008 Anthoceros agrestis HOM05D004063 ORTHO05D038441 4.0e-07 59.3 152 32.2
Cc07_g21160 Coffea canephora HOM05D004063 ORTHO05D022408 6.9e-07 58.5 34 76.5
SalBow5G2926 Salvia bowleyana HOM05D004063 ORTHO05D022408 1.2e-06 57.8 30 86.7
SalBow5G3951 Salvia bowleyana HOM05D004063 ORTHO05D022408 1.2e-06 57.8 30 86.7
SalBow5G4788 Salvia bowleyana HOM05D004063 ORTHO05D022408 1.2e-06 57.8 30 86.7
vmacro04405 Vaccinium macrocarpon HOM05D004063 ORTHO05D005326 2.0e-06 57.0 96 41.7
Pp3c23_20720 Physcomitrium patens HOM05D004063 ORTHO05D038441 2.6e-06 56.6 154 28.6
AL4G37040 Arabidopsis lyrata HOM05D004167 ORTHO05D005012 9.9e-06 54.7 98 34.7
Cre16.g652850 Chlamydomonas reinhardtii HOM05D004167 ORTHO05D005012 9.9e-06 54.7 99 38.4


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