Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0027796 Camellia sinensis var. sinensis HOM05D006985 ORTHO05D008749 9.0e-99 363.6 186 100.0
CSS0005033 Camellia sinensis var. sinensis HOM05D006985 ORTHO05D008749 2.4e-96 355.5 189 97.9
Rhsim10G0013600 Rhododendron simsii HOM05D006985 ORTHO05D008749 2.5e-72 275.8 194 77.3
Rhsim08G0007300 Rhododendron simsii HOM05D006985 ORTHO05D008749 3.0e-70 268.9 194 76.3
Actinidia28892 Actinidia chinensis HOM05D006985 ORTHO05D008749 5.1e-70 268.1 187 77.0
Rhsim08G0006600 Rhododendron simsii HOM05D006985 ORTHO05D008749 3.3e-69 265.4 194 75.8
Lj2A564T40 Lonicera japonica HOM05D006985 ORTHO05D008749 3.7e-68 261.9 194 71.6
Dinv42695 Davidia involucrata HOM05D006985 ORTHO05D008749 6.3e-68 261.2 186 75.8
TAR625G1052 Trochodendron aralioides HOM05D006985 ORTHO05D008749 2.4e-67 259.2 191 72.3
Oeu028373.1 Olea europaea HOM05D006985 ORTHO05D008749 4.5e-66 255.0 188 70.2
Gohir.A02G134801 Gossypium hirsutum HOM05D006985 ORTHO05D008749 8.5e-65 250.8 194 69.1
GSVIVG01022222001 Vitis vinifera HOM05D006985 ORTHO05D008749 1.4e-64 250.0 193 69.9
Gohir.D03G045800 Gossypium hirsutum HOM05D006985 ORTHO05D008749 1.9e-64 249.6 194 69.1
Gorai.003G047000 Gossypium raimondii HOM05D006985 ORTHO05D008749 1.9e-64 249.6 194 69.1
vmacro18630 Vaccinium macrocarpon HOM05D006985 ORTHO05D008749 1.9e-64 249.6 200 67.0
Duzib147G0418 Durio zibethinus HOM05D006985 ORTHO05D008749 7.2e-64 247.7 195 68.2
Nn5g28916 Nelumbo nucifera HOM05D006985 ORTHO05D008749 3.6e-63 245.4 187 66.8
Cfa002750 Carpinus fangiana HOM05D006985 ORTHO05D008749 4.6e-63 245.0 199 66.3
Thecc.01G112400 Theobroma cacao HOM05D006985 ORTHO05D008749 1.0e-62 243.8 193 68.4
Manes.12G142400 Manihot esculenta HOM05D006985 ORTHO05D008749 1.4e-62 243.4 191 68.1
Hma1.2p1_0375F.1_g138690 Hydrangea macrophylla HOM05D006985 ORTHO05D008749 1.8e-62 243.0 184 69.6
QL06p032211 Quercus lobata HOM05D006985 ORTHO05D008749 2.3e-62 242.7 204 66.2
CiPaw.04G092100 Carya illinoinensis HOM05D006985 ORTHO05D008749 3.0e-62 242.3 194 66.5
TWI53G2009 Tripterygium wilfordii HOM05D006985 ORTHO05D008749 3.9e-62 241.9 191 68.1
COL.COLO4_11016 Corchorus olitorius HOM05D006985 ORTHO05D008749 1.5e-61 240.0 193 68.4
Sabra05G0069300 Salix brachista HOM05D006985 ORTHO05D008749 1.5e-61 240.0 202 65.3
Glyma.08G141300 Glycine max HOM05D006985 ORTHO05D008749 4.3e-61 238.4 194 67.0
Haze_25036 Corylus avellana HOM05D006985 ORTHO05D008749 5.7e-61 238.0 198 64.1
Phvul.002G264600 Phaseolus vulgaris HOM05D006985 ORTHO05D008749 7.4e-61 237.7 192 66.7
Lalb_Chr13g0296201 Lupinus albus HOM05D006985 ORTHO05D008749 1.3e-60 236.9 194 66.0
Potri.005G084200 Populus trichocarpa HOM05D006985 ORTHO05D008749 3.7e-60 235.3 203 65.5
Cc07_g16120 Coffea canephora HOM05D006985 ORTHO05D008749 6.3e-60 234.6 206 63.1
VMungo0251G1437 Vigna mungo HOM05D006985 ORTHO05D008749 6.3e-60 234.6 190 66.3
Glyma.05G183500 Glycine max HOM05D006985 ORTHO05D008749 8.2e-60 234.2 192 66.1
MBI02_g45734_MAGBIO Magnolia biondii HOM05D006985 ORTHO05D008749 1.1e-59 233.8 190 64.7
Oeu030683.1 Olea europaea HOM05D006985 ORTHO05D008749 1.1e-59 233.8 191 65.4
PGR004G1495 Punica granatum HOM05D006985 ORTHO05D008749 4.1e-59 231.9 202 64.9
ECA238G4202 Erigeron canadensis HOM05D006985 ORTHO05D008749 5.3e-59 231.5 202 62.9
Duzib187G0142 Durio zibethinus HOM05D006985 ORTHO05D008749 2.0e-58 229.6 198 65.7
Lsat_1_v5_gn_2_67381 Lactuca sativa HOM05D006985 ORTHO05D008749 2.6e-58 229.2 199 62.8
Nitab4.5_0000471g0030 Nicotiana tabacum HOM05D006985 ORTHO05D008749 3.4e-58 228.8 195 65.1
Peaxi162Scf00323g00052 Petunia axillaris HOM05D006985 ORTHO05D008749 3.4e-58 228.8 192 67.2
PGSC0003DMG400016590 Solanum tuberosum HOM05D006985 ORTHO05D008749 2.2e-57 226.1 193 63.7
MBI02_g20708_MAGBIO Magnolia biondii HOM05D006985 ORTHO05D008749 1.1e-56 223.8 179 66.5
CAN.G276.1 Capsicum annuum HOM05D006985 ORTHO05D008749 1.9e-56 223.0 199 64.3
RcHm_v2.0_Chr2g0116361 Rosa chinensis HOM05D006985 ORTHO05D008749 1.9e-56 223.0 161 73.3
arahy.Tifrunner.gnm1.ann1.7DG6XK Arachis hypogaea HOM05D006985 ORTHO05D008749 2.5e-56 222.6 188 63.8
Ciclev10026526m.g Citrus clementina HOM05D006985 ORTHO05D008749 7.2e-56 221.1 150 74.0
Sc16g0004160 Simmondsia chinensis HOM05D006985 ORTHO05D008749 7.2e-56 221.1 184 67.4
arahy.Tifrunner.gnm1.ann1.MHK3H7 Arachis hypogaea HOM05D006985 ORTHO05D008749 9.4e-56 220.7 188 63.3
MSTRG.23313 Avicennia marina HOM05D006985 ORTHO05D008749 1.6e-55 219.9 187 62.6
FvH4_1g22220 Fragaria vesca HOM05D006985 ORTHO05D008749 1.6e-55 219.9 204 62.3
HanXRQChr14g0446291 Helianthus annuus HOM05D006985 ORTHO05D008749 1.6e-55 219.9 202 59.9
CANSAT01G0007 Cannabis sativa HOM05D006985 ORTHO05D008749 2.1e-55 219.5 199 62.8
Lj4g0016816 Lotus japonicus HOM05D006985 ORTHO05D008749 2.1e-55 219.5 193 63.2
SalBow6G7167 Salvia bowleyana HOM05D006985 ORTHO05D008749 2.1e-55 219.5 185 64.3
DCAR_010078 Daucus carota HOM05D006985 ORTHO05D008749 2.7e-55 219.2 193 63.7
Eucgr.I00326 Eucalyptus grandis HOM05D006985 ORTHO05D008749 4.7e-55 218.4 205 61.5
Prupe.6G173300 Prunus persica HOM05D006985 ORTHO05D008749 1.0e-54 217.2 196 62.2
Atru.chr4.358 Acer truncatum HOM05D006985 ORTHO05D008749 1.8e-54 216.5 195 62.1
FAN23G1894 Fragaria x ananassa HOM05D006985 ORTHO05D008749 3.0e-54 215.7 203 61.1
AT2G21970 Arabidopsis thaliana HOM05D006985 ORTHO05D008749 8.8e-54 214.2 191 62.3
Cpa.g.sc196.10 Carica papaya HOM05D006985 ORTHO05D008749 8.8e-54 214.2 150 75.3
THA.LOC104804144 Tarenaya hassleriana HOM05D006985 ORTHO05D008749 8.8e-54 214.2 192 59.9
Sopen04g023520 Solanum pennellii HOM05D006985 ORTHO05D008749 3.3e-53 212.2 193 62.2
AL4G11290 Arabidopsis lyrata HOM05D006985 ORTHO05D008749 5.7e-53 211.5 208 57.7
Carub.0004s0111 Capsella rubella HOM05D006985 ORTHO05D008749 5.7e-53 211.5 197 59.4
SGA_v2.0_scaffold51G18747 Striga asiatica HOM05D006985 ORTHO05D008749 7.4e-53 211.1 184 59.8
Solyc04g053130.4 Solanum lycopersicum HOM05D006985 ORTHO05D008749 9.7e-53 210.7 196 62.8
A09p57880 Brassica napus HOM05D006985 ORTHO05D008749 1.7e-52 209.9 202 58.4
C08p41110 Brassica napus HOM05D006985 ORTHO05D008749 1.7e-52 209.9 202 58.4
BolC8t51677H Brassica oleracea HOM05D006985 ORTHO05D008749 1.7e-52 209.9 202 58.4
BraA09t41180Z Brassica rapa HOM05D006985 ORTHO05D008749 1.7e-52 209.9 202 58.4
BcaC07g41109 Brassica carinata HOM05D006985 ORTHO05D008749 4.8e-52 208.4 202 57.9
Sp4g01050 Schrenkiella parvula HOM05D006985 ORTHO05D008749 8.2e-52 207.6 196 58.7
Dinv19490 Davidia involucrata HOM05D006985 ORTHO05D008749 1.4e-51 206.8 141 77.3
MD15G1333400 Malus domestica HOM05D006985 ORTHO05D008749 1.4e-51 206.8 188 60.6
Thhalv10000325m.g Eutrema salsugineum HOM05D006985 ORTHO05D008749 4.1e-51 205.3 190 59.5
Aqoxy5G01954 Aquilegia oxysepala HOM05D006985 ORTHO05D008749 9.1e-51 204.1 187 56.1
Sed0020932 Sechium edule HOM05D006985 ORTHO05D008749 1.5e-50 203.4 181 61.3
BcaB08g35014 Brassica carinata HOM05D006985 ORTHO05D008749 2.6e-50 202.6 194 59.8
Ca_17697_v3 Cicer arietinum L. HOM05D006985 ORTHO05D008749 3.5e-50 202.2 202 59.9
Migut.H02428 Erythranthe guttata HOM05D006985 ORTHO05D008749 1.3e-49 200.3 188 61.2
MELO3C007486.2 Cucumis melo HOM05D006985 ORTHO05D008749 1.7e-49 199.9 192 59.4
Aa31LG7G14690 Aethionema arabicum HOM05D006985 ORTHO05D008749 2.2e-49 199.5 197 57.4
Aqoxy7G01607 Aquilegia oxysepala HOM05D006985 ORTHO05D008749 2.2e-49 199.5 186 55.4
ClCG01G016160 Citrullus lanatus HOM05D006985 ORTHO05D008749 2.2e-49 199.5 192 59.9
Psat7g051440 Pisum sativum HOM05D006985 ORTHO05D008749 5.0e-49 198.4 186 59.7
CsaV3_6G042430 Cucumis sativus L. HOM05D006985 ORTHO05D008749 4.7e-47 191.8 189 58.7
Ah.03g141710 Amaranthus hybridus HOM05D006985 ORTHO05D008749 8.0e-47 191.0 202 55.9
CDE02G4368 Ceratophyllum demersum HOM05D006985 ORTHO05D008749 3.0e-46 189.1 180 55.6
PSO210G1005 Papaver somniferum HOM05D006985 ORTHO05D008749 1.5e-45 186.8 200 51.0
Hund03540 Selenicereus undatus HOM05D006985 ORTHO05D008749 2.0e-45 186.4 198 54.5
EL10Ac6g14751 Beta vulgaris HOM05D006985 ORTHO05D008749 3.7e-44 182.2 192 55.2
Zm00001eb431840 Zea mays HOM05D006985 ORTHO05D008749 1.1e-43 180.6 198 50.5
MSTRG.3810 Avicennia marina HOM05D006985 ORTHO05D008749 4.1e-43 178.7 143 62.2
AUR62003309 Chenopodium quinoa HOM05D006985 ORTHO05D008749 4.1e-43 178.7 195 52.8
Os04g0639200 Oryza sativa ssp. japonica HOM05D006985 ORTHO05D008749 7.0e-43 177.9 199 50.3
AUR62016276 Chenopodium quinoa HOM05D006985 ORTHO05D008749 1.2e-42 177.2 194 53.6
HPP92_013077 Vanilla planifolia HOM05D006985 ORTHO05D008749 2.6e-42 176.0 150 58.7
ATR0564G194 Amborella trichopoda HOM05D006985 ORTHO05D008749 4.7e-39 165.2 149 55.0
SEGI_00004 Sequoiadendron giganteum HOM05D006985 ORTHO05D008749 3.8e-33 145.6 160 46.9
PSO170G0586 Papaver somniferum HOM05D006985 ORTHO05D008749 7.2e-32 141.4 157 50.3
CARHR113060 Cardamine hirsuta HOM05D006985 ORTHO05D008749 8.3e-28 127.9 92 67.4
Hund19658 Selenicereus undatus HOM05D006985 ORTHO05D008749 1.7e-20 103.6 221 35.7
AagrBONN_evm.TU.Sc2ySwM_362.2621 Anthoceros agrestis HOM05D006985 ORTHO05D008749 5.4e-19 98.6 154 34.4
CARHR113050 Cardamine hirsuta HOM05D006985 ORTHO05D008749 2.7e-18 96.3 100 54.0
SMO356G0636 Selaginella moellendorffii HOM05D006985 ORTHO05D008749 1.7e-17 93.6 140 33.6
FAN26G1540 Fragaria x ananassa HOM05D000436 ORTHO05D000678 2.9e-17 92.8 74 67.6
SMO174G0105 Selaginella moellendorffii HOM05D006985 ORTHO05D008749 5.0e-17 92.0 142 35.2
CBR_g770 Chara braunii HOM05D006985 ORTHO05D008749 2.8e-15 86.3 139 35.3
unitig_88.g27736 Utricularia gibba HOM05D006985 ORTHO05D008749 6.1e-15 85.1 126 42.1
Mapoly0007s0046 Marchantia polymorpha HOM05D006985 ORTHO05D008749 2.6e-13 79.7 142 33.8
Pp3c16_13700 Physcomitrium patens HOM05D006985 ORTHO05D008749 7.5e-13 78.2 151 29.8
CDE08G1171 Ceratophyllum demersum HOM05D000290 ORTHO05D009072 3.7e-12 75.9 67 55.2
Pp3c27_3810 Physcomitrium patens HOM05D006985 ORTHO05D008749 1.4e-11 73.9 164 28.0


User provided reference genes

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