Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0012952 Camellia sinensis var. sinensis HOM05D008113 ORTHO05D009793 1.5e-92 342.8 174 100.0
CSS0027769 Camellia sinensis var. sinensis HOM05D008113 ORTHO05D009793 1.5e-92 342.8 174 100.0
Rhsim07G0126900 Rhododendron simsii HOM05D008113 ORTHO05D009793 2.8e-54 215.7 174 68.4
CSS0025106 Camellia sinensis var. sinensis HOM05D008113 ORTHO05D009793 2.2e-51 206.1 165 66.1
Actinidia09200 Actinidia chinensis HOM05D008113 ORTHO05D009793 5.5e-50 201.4 171 63.7
Rhsim07G0125800 Rhododendron simsii HOM05D008113 ORTHO05D009793 1.6e-49 199.9 159 69.2
Dinv28958 Davidia involucrata HOM05D008113 ORTHO05D009793 5.2e-48 194.9 175 62.9
Cfa012440 Carpinus fangiana HOM05D008113 ORTHO05D009793 1.2e-41 173.7 174 56.3
Actinidia09205 Actinidia chinensis HOM05D008113 ORTHO05D009793 2.7e-41 172.6 128 67.2
CiPaw.11G093400 Carya illinoinensis HOM05D008113 ORTHO05D009793 3.3e-39 165.6 173 52.0
Prupe.5G036500 Prunus persica HOM05D008113 ORTHO05D009793 7.7e-36 154.5 175 50.9
Haze_08228 Corylus avellana HOM05D008113 ORTHO05D009793 2.2e-35 152.9 148 56.1
QL12p005179 Quercus lobata HOM05D008113 ORTHO05D009793 5.0e-35 151.8 174 50.0
Thecc.03G227800 Theobroma cacao HOM05D008113 ORTHO05D009793 7.2e-34 147.9 175 52.0
Duzib205G0546 Durio zibethinus HOM05D008113 ORTHO05D009793 1.2e-33 147.1 175 51.4
Manes.17G015710 Manihot esculenta HOM05D008113 ORTHO05D009793 1.6e-33 146.7 174 48.3
Atru.chr6.1709 Acer truncatum HOM05D008113 ORTHO05D009793 6.1e-33 144.8 174 51.7
DCAR_008271 Daucus carota HOM05D008113 ORTHO05D009793 6.1e-33 144.8 173 48.6
RcHm_v2.0_Chr7g0209731 Rosa chinensis HOM05D008113 ORTHO05D009793 8.0e-33 144.4 169 49.1
FAN08G1006 Fragaria x ananassa HOM05D008113 ORTHO05D009793 7.5e-31 137.9 172 48.8
Hma1.2p1_1063F.1_g253560 Hydrangea macrophylla HOM05D008113 ORTHO05D009793 9.8e-31 137.5 175 47.4
COL.COLO4_17032 Corchorus olitorius HOM05D008113 ORTHO05D009793 1.3e-30 137.1 178 49.4
FAN04G2725 Fragaria x ananassa HOM05D008113 ORTHO05D009793 1.3e-30 137.1 172 48.3
Hma1.2p1_2704F.1_g327140 Hydrangea macrophylla HOM05D008113 ORTHO05D009793 1.3e-30 137.1 175 47.4
Ciclev10012946m.g Citrus clementina HOM05D008113 ORTHO05D009793 2.2e-30 136.3 174 48.3
Sabra01G0111000 Salix brachista HOM05D008113 ORTHO05D009793 3.1e-29 132.5 175 48.0
FvH4_5g22080 Fragaria vesca HOM05D008113 ORTHO05D009793 5.4e-29 131.7 158 50.0
Glyma.09G204200 Glycine max HOM05D008113 ORTHO05D009793 2.7e-28 129.4 175 45.7
Gorai.003G181900 Gossypium raimondii HOM05D008113 ORTHO05D009793 3.5e-28 129.0 175 49.1
Medtr5g030480 Medicago truncatula HOM05D008113 ORTHO05D009793 3.5e-28 129.0 175 46.3
Gohir.D03G171300 Gossypium hirsutum HOM05D008113 ORTHO05D009793 4.5e-28 128.6 175 49.1
Phvul.002G141700 Phaseolus vulgaris HOM05D008113 ORTHO05D009793 4.5e-28 128.6 174 43.7
VMungo1215G1592 Vigna mungo HOM05D008113 ORTHO05D009793 1.7e-27 126.7 177 42.9
Ca_06079_v3 Cicer arietinum L. HOM05D008113 ORTHO05D009793 2.3e-27 126.3 175 46.3
Lj2g0011936 Lotus japonicus HOM05D008113 ORTHO05D009793 2.3e-27 126.3 173 45.7
TWI60G1148 Tripterygium wilfordii HOM05D008113 ORTHO05D009793 6.5e-27 124.8 158 47.5
Potri.001G142300 Populus trichocarpa HOM05D008113 ORTHO05D009793 1.5e-26 123.6 175 47.4
Gohir.A03G000900 Gossypium hirsutum HOM05D008113 ORTHO05D009793 2.8e-25 119.4 175 47.4
Psat2g135920 Pisum sativum HOM05D008113 ORTHO05D009793 2.8e-25 119.4 175 42.3
Nn1g08044 Nelumbo nucifera HOM05D008113 ORTHO05D009793 6.1e-25 118.2 168 44.0
MSTRG.1985 Avicennia marina HOM05D008113 ORTHO05D009793 1.0e-24 117.5 190 41.1
Glyma.01G018600 Glycine max HOM05D008113 ORTHO05D009793 1.7e-22 110.2 177 41.8
Sc22g0001540 Simmondsia chinensis HOM05D008113 ORTHO05D009793 2.2e-22 109.8 151 43.7
Aqoxy3G02349 Aquilegia oxysepala HOM05D008113 ORTHO05D009793 3.7e-22 109.0 166 43.4
Sed0025759 Sechium edule HOM05D008113 ORTHO05D009793 4.1e-21 105.5 165 40.0
CsaV3_3G049170 Cucumis sativus L. HOM05D008113 ORTHO05D009793 7.0e-21 104.8 176 42.6
Ah.12g055040 Amaranthus hybridus HOM05D008113 ORTHO05D009793 2.0e-20 103.2 154 45.5
MELO3C003410.2 Cucumis melo HOM05D008113 ORTHO05D009793 2.7e-20 102.8 176 42.0
FAN18G0344 Fragaria x ananassa HOM05D008113 ORTHO05D009793 4.5e-20 102.1 127 47.2
CANSAT21G0751 Cannabis sativa HOM05D008113 ORTHO05D009793 5.9e-20 101.7 190 39.5
Migut.E00933 Erythranthe guttata HOM05D008113 ORTHO05D009793 2.9e-19 99.4 169 39.6
Sed0024146 Sechium edule HOM05D008113 ORTHO05D009793 6.6e-19 98.2 174 39.1
SGA_v2.0_scaffold20G09258 Striga asiatica HOM05D008113 ORTHO05D009793 6.6e-19 98.2 167 40.1
ECA233G2707 Erigeron canadensis HOM05D008113 ORTHO05D009793 1.1e-18 97.4 176 38.1
PSO782G0685 Papaver somniferum HOM05D008113 ORTHO05D009793 5.6e-18 95.1 170 38.2
EL10Ac5g12119 Beta vulgaris HOM05D008113 ORTHO05D009793 4.7e-17 92.0 133 43.6
PSO063G7600 Papaver somniferum HOM05D008113 ORTHO05D009793 8.0e-17 91.3 174 37.9
MBI04_g23600_MAGBIO Magnolia biondii HOM05D008113 ORTHO05D009793 1.4e-16 90.5 154 43.5
MD06G1034100 Malus domestica HOM05D008113 ORTHO05D009793 2.3e-16 89.7 156 40.4
PGSC0003DMG400001153 Solanum tuberosum HOM05D023668 ORTHO05D009793 5.8e-15 85.1 189 32.8
HanXRQChr11g0339791 Helianthus annuus HOM05D008113 ORTHO05D009793 6.4e-14 81.6 213 32.9
Cc08_g02770 Coffea canephora HOM05D008113 ORTHO05D009793 8.3e-14 81.3 98 43.9
MD06G1034200 Malus domestica HOM05D008113 ORTHO05D009793 1.1e-13 80.9 156 35.9
AUR62018715 Chenopodium quinoa HOM05D008113 ORTHO05D009793 1.4e-13 80.5 136 40.4
THA.LOC104814445 Tarenaya hassleriana HOM05D008113 ORTHO05D009793 5.4e-13 78.6 159 34.0
Lalb_Chr16g0381371 Lupinus albus HOM05D008113 ORTHO05D009793 3.5e-12 75.9 174 33.9
unitig_22.g5500 Utricularia gibba HOM05D008113 ORTHO05D009793 6.0e-12 75.1 163 38.7
AUR62007292 Chenopodium quinoa HOM05D008113 ORTHO05D009793 1.3e-11 73.9 105 43.8
Nitab4.5_0002539g0010 Nicotiana tabacum HOM05D023668 ORTHO05D009793 5.0e-11 72.0 246 26.4
Sopen08g001050 Solanum pennellii HOM05D023668 ORTHO05D009793 2.5e-10 69.7 213 27.7
TPR.G1024 Trifolium pratense HOM05D008113 ORTHO05D009793 7.3e-10 68.2 177 32.8
Nitab4.5_0000804g0140 Nicotiana tabacum HOM05D023668 ORTHO05D009793 6.2e-09 65.1 257 24.1
CARHR032060 Cardamine hirsuta HOM05D012772 ORTHO05D009793 1.1e-08 64.3 89 41.6
Sp1g28300 Schrenkiella parvula HOM05D012772 ORTHO05D009793 8.9e-08 61.2 108 37.0
Thhalv10009063m.g Eutrema salsugineum HOM05D012772 ORTHO05D009793 9.8e-07 57.8 100 37.0
Carub.0001s3101 Capsella rubella HOM05D012772 ORTHO05D009793 1.3e-06 57.4 92 37.0
SGA_v2.0_scaffold89G27590 Striga asiatica HOM05D000681 ORTHO05D009793 8.3e-06 54.7 60 43.3
HPP92_014861 Vanilla planifolia HOM05D008113 ORTHO05D009793 8.3e-06 54.7 179 28.5


User provided reference genes

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