Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0027706 Camellia sinensis var. sinensis HOM05D014951 ORTHO05D013045 1.1e-186 656.4 312 100.0
CSS0034673 Camellia sinensis var. sinensis HOM05D014951 ORTHO05D013045 5.5e-93 345.1 319 60.2
CSS0042261 Camellia sinensis var. sinensis HOM05D014951 ORTHO05D013045 1.9e-24 117.5 112 50.9
CSS0034567 Camellia sinensis var. sinensis HOM05D028315 ORTHO05D007704 7.4e-21 105.5 136 44.9
CSS0009477 Camellia sinensis var. sinensis HOM05D014951 ORTHO05D013045 3.1e-19 100.1 147 39.5
CSS0008775 Camellia sinensis var. sinensis HOM05D014951 ORTHO05D013045 4.0e-19 99.8 156 35.9
CSS0035103 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.0e-17 95.1 196 32.7
CSS0004222 Camellia sinensis var. sinensis HOM05D014951 ORTHO05D013045 7.1e-16 89.0 98 46.9
Dinv08590 Davidia involucrata HOM05D010100 ORTHO05D006370 8.2e-12 75.5 123 36.6
Dinv36988 Davidia involucrata HOM05D010100 ORTHO05D006370 3.1e-11 73.6 124 36.3
CSS0018973 Camellia sinensis var. sinensis HOM05D028315 ORTHO05D013045 2.0e-10 70.9 68 55.9
CSS0022885 Camellia sinensis var. sinensis HOM05D028315 ORTHO05D013045 2.0e-10 70.9 68 55.9
Peaxi162Scf00386g00616 Petunia axillaris HOM05D001137 ORTHO05D005066 3.4e-10 70.1 127 33.1
CSS0007903 Camellia sinensis var. sinensis HOM05D028315 ORTHO05D013045 7.6e-10 68.9 53 56.6
Dinv13641 Davidia involucrata HOM05D010100 ORTHO05D006370 6.5e-09 65.9 124 35.5
CSS0048052 Camellia sinensis var. sinensis HOM05D020540 ORTHO05D013045 3.2e-08 63.5 68 44.1
PGSC0003DMG400023816 Solanum tuberosum HOM05D008032 ORTHO05D006370 1.6e-07 61.2 127 29.9
PGSC0003DMG400046683 Solanum tuberosum HOM05D008032 ORTHO05D006370 2.1e-07 60.8 85 37.6
PGSC0003DMG400019954 Solanum tuberosum HOM05D002612 ORTHO05D002859 4.6e-07 59.7 88 34.1
PGSC0003DMG400026721 Solanum tuberosum HOM05D008032 ORTHO05D006370 4.6e-07 59.7 156 25.0
PGSC0003DMG400034627 Solanum tuberosum HOM05D008032 ORTHO05D006370 4.6e-07 59.7 88 34.1
PGSC0003DMG400036183 Solanum tuberosum HOM05D008032 ORTHO05D006370 4.6e-07 59.7 88 34.1
PGSC0003DMG400036968 Solanum tuberosum HOM05D008032 ORTHO05D006370 4.6e-07 59.7 88 34.1
Dinv04932 Davidia involucrata HOM05D010100 ORTHO05D006370 6.1e-07 59.3 92 40.2
Nitab4.5_0000317g0230 Nicotiana tabacum HOM05D008032 ORTHO05D007704 1.0e-06 58.5 88 36.4
Actinidia10652 Actinidia chinensis HOM05D008877 ORTHO05D006370 2.3e-06 57.4 152 25.0
PGSC0003DMG400047165 Solanum tuberosum HOM05D008032 ORTHO05D006370 3.0e-06 57.0 88 30.7


User provided reference genes

Program Settings