Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0027694 Camellia sinensis var. sinensis HOM05D005891 ORTHO05D007214 2.5e-74 282.0 133 100.0
Actinidia39186 Actinidia chinensis HOM05D005891 ORTHO05D007214 3.6e-41 171.8 125 71.2
Actinidia09292 Actinidia chinensis HOM05D005891 ORTHO05D007214 3.3e-39 165.2 124 68.5
Rhsim03G0031400 Rhododendron simsii HOM05D005891 ORTHO05D007214 4.1e-37 158.3 120 66.7
Actinidia39189 Actinidia chinensis HOM05D005891 ORTHO05D007214 2.5e-34 149.1 125 63.2
GSVIVG01033562001 Vitis vinifera HOM05D005891 ORTHO05D007214 3.6e-33 145.2 113 61.1
Hma1.2p1_0275F.1_g110840 Hydrangea macrophylla HOM05D005891 ORTHO05D007214 2.3e-32 142.5 116 58.6
Ciclev10025261m.g Citrus clementina HOM05D005891 ORTHO05D007214 1.3e-30 136.7 112 61.6
TAR633G2073 Trochodendron aralioides HOM05D005891 ORTHO05D007214 1.1e-29 133.7 117 55.6
Cfa016743 Carpinus fangiana HOM05D005891 ORTHO05D007214 4.1e-29 131.7 111 56.8
Nitab4.5_0001618g0090 Nicotiana tabacum HOM05D005891 ORTHO05D007214 9.1e-29 130.6 112 56.2
Ciclev10031083m.g Citrus clementina HOM05D005891 ORTHO05D007214 3.5e-28 128.6 123 54.5
Atru.chr11.2650 Acer truncatum HOM05D005891 ORTHO05D007214 1.7e-27 126.3 121 54.5
CAN.G1237.25 Capsicum annuum HOM05D005891 ORTHO05D007214 2.9e-27 125.6 111 54.1
Peaxi162Scf00130g01129 Petunia axillaris HOM05D005891 ORTHO05D007214 6.5e-27 124.4 112 53.6
TWI53G1500 Tripterygium wilfordii HOM05D005891 ORTHO05D007214 1.1e-26 123.6 115 52.2
Haze_19761 Corylus avellana HOM05D005891 ORTHO05D007214 1.9e-26 122.9 111 55.0
COL.COLO4_20863 Corchorus olitorius HOM05D005891 ORTHO05D007214 3.2e-26 122.1 109 51.4
Nitab4.5_0008674g0030 Nicotiana tabacum HOM05D005891 ORTHO05D007214 3.2e-26 122.1 111 52.3
PGSC0003DMG402007625 Solanum tuberosum HOM05D005891 ORTHO05D007214 4.2e-26 121.7 111 55.0
Manes.09G010000 Manihot esculenta HOM05D005891 ORTHO05D007214 5.5e-26 121.3 105 57.1
CANSAT80G2643 Cannabis sativa HOM05D005891 ORTHO05D007214 7.2e-26 120.9 111 51.4
Gorai.006G219000 Gossypium raimondii HOM05D005891 ORTHO05D007214 7.2e-26 120.9 84 61.9
Gohir.A09G201700 Gossypium hirsutum HOM05D005891 ORTHO05D007214 4.7e-25 118.2 84 60.7
Solyc04g017700.4 Solanum lycopersicum HOM05D005891 ORTHO05D007214 8.0e-25 117.5 85 63.5
Sopen04g008780 Solanum pennellii HOM05D005891 ORTHO05D007214 8.0e-25 117.5 85 63.5
Duzib151G0628 Durio zibethinus HOM05D005891 ORTHO05D007214 1.0e-24 117.1 106 52.8
Duzib212G0478 Durio zibethinus HOM05D005891 ORTHO05D007214 1.4e-24 116.7 116 49.1
QL07p004892 Quercus lobata HOM05D005891 ORTHO05D007214 1.4e-24 116.7 96 56.2
Oeu015292.1 Olea europaea HOM05D005891 ORTHO05D007214 3.0e-24 115.5 115 47.8
Actinidia39187 Actinidia chinensis HOM05D005891 ORTHO05D007214 4.0e-24 115.2 78 73.1
Thecc.04G215900 Theobroma cacao HOM05D005891 ORTHO05D007214 4.0e-24 115.2 116 49.1
MD14G1081800 Malus domestica HOM05D005891 ORTHO05D007214 6.8e-24 114.4 116 51.7
Lj1g0021626 Lotus japonicus HOM05D005891 ORTHO05D007214 8.8e-24 114.0 83 61.4
PGR031G3404 Punica granatum HOM05D005891 ORTHO05D007214 2.0e-23 112.8 87 57.5
CANSAT80G2523 Cannabis sativa HOM05D005891 ORTHO05D007214 2.6e-23 112.5 82 56.1
MD12G1089200 Malus domestica HOM05D005891 ORTHO05D007214 2.6e-23 112.5 95 57.9
Ca_08420_v3 Cicer arietinum L. HOM05D005891 ORTHO05D007214 3.4e-23 112.1 105 50.5
Potri.006G044500 Populus trichocarpa HOM05D005891 ORTHO05D007214 3.4e-23 112.1 94 59.6
ClCG04G004100 Citrullus lanatus HOM05D005891 ORTHO05D007214 5.7e-23 111.3 83 60.2
Prupe.4G274500 Prunus persica HOM05D005891 ORTHO05D007214 1.3e-22 110.2 100 52.0
CiPaw.09G043200 Carya illinoinensis HOM05D005891 ORTHO05D007214 6.3e-22 107.8 98 52.0
FvH4_6g24900 Fragaria vesca HOM05D005891 ORTHO05D007214 8.3e-22 107.5 117 44.4
Nn7g36464 Nelumbo nucifera HOM05D005891 ORTHO05D007214 1.1e-21 107.1 97 50.5
RcHm_v2.0_Chr2g0124601 Rosa chinensis HOM05D005891 ORTHO05D007214 1.8e-21 106.3 90 55.6
Cc06_g18470 Coffea canephora HOM05D005891 ORTHO05D007214 3.1e-21 105.5 110 46.4
FAN14G5310 Fragaria x ananassa HOM05D005891 ORTHO05D007214 3.1e-21 105.5 117 43.6
Lalb_Chr20g0110281 Lupinus albus HOM05D005891 ORTHO05D007214 1.2e-20 103.6 120 45.0
Sed0000553 Sechium edule HOM05D005891 ORTHO05D007214 2.7e-20 102.4 91 52.7
FAN05G1661 Fragaria x ananassa HOM05D005891 ORTHO05D007214 3.5e-20 102.1 117 41.9
FAN05G3805 Fragaria x ananassa HOM05D005891 ORTHO05D007214 3.5e-20 102.1 117 41.9
PSO063G0854 Papaver somniferum HOM05D005891 ORTHO05D007214 3.5e-20 102.1 106 47.2
Phvul.001G127800 Phaseolus vulgaris HOM05D005891 ORTHO05D007214 3.5e-20 102.1 83 55.4
vmacro20338 Vaccinium macrocarpon HOM05D005891 ORTHO05D007214 3.5e-20 102.1 91 56.0
TWI74G1459 Tripterygium wilfordii HOM05D005891 ORTHO05D007214 4.5e-20 101.7 99 51.5
MELO3C014212.2 Cucumis melo HOM05D005891 ORTHO05D007214 5.9e-20 101.3 84 59.5
CsaV3_4G022060 Cucumis sativus L. HOM05D005891 ORTHO05D007214 5.9e-20 101.3 84 58.3
Psat3g075960 Pisum sativum HOM05D005891 ORTHO05D007214 5.9e-20 101.3 83 54.2
TPR.G32752 Trifolium pratense HOM05D005891 ORTHO05D007214 5.9e-20 101.3 83 53.0
Medtr7g090600 Medicago truncatula HOM05D005891 ORTHO05D007214 7.7e-20 100.9 83 53.0
FAN02G2483 Fragaria x ananassa HOM05D005891 ORTHO05D007214 1.0e-19 100.5 80 56.2
THA.LOC104824423 Tarenaya hassleriana HOM05D005891 ORTHO05D007214 1.0e-19 100.5 81 54.3
PSO170G1429 Papaver somniferum HOM05D005891 ORTHO05D007214 2.9e-19 99.0 96 47.9
VMungo1383G0485 Vigna mungo HOM05D005891 ORTHO05D007214 3.8e-19 98.6 83 53.0
arahy.Tifrunner.gnm1.ann1.324ZN3 Arachis hypogaea HOM05D005891 ORTHO05D007214 8.6e-19 97.4 82 53.7
arahy.Tifrunner.gnm1.ann1.68N1MV Arachis hypogaea HOM05D005891 ORTHO05D007214 8.6e-19 97.4 82 53.7
Glyma.18G212600 Glycine max HOM05D005891 ORTHO05D007214 1.5e-18 96.7 83 50.6
ECA246G3700 Erigeron canadensis HOM05D005891 ORTHO05D007214 2.5e-18 95.9 103 47.6
Glyma.03G131800 Glycine max HOM05D005891 ORTHO05D007214 3.3e-18 95.5 83 51.8
HanXRQChr17g0536551 Helianthus annuus HOM05D005891 ORTHO05D007214 2.8e-17 92.4 104 44.2
Sc19g0008430 Simmondsia chinensis HOM05D005891 ORTHO05D007214 4.7e-17 91.7 84 50.0
AT3G57170 Arabidopsis thaliana HOM05D005891 ORTHO05D007214 8.0e-17 90.9 84 44.0
SalBow4G2335 Salvia bowleyana HOM05D005891 ORTHO05D007214 8.0e-17 90.9 90 45.6
Aqoxy7G02967 Aquilegia oxysepala HOM05D005891 ORTHO05D007214 3.0e-16 89.0 122 40.2
DCAR_002883 Daucus carota HOM05D005891 ORTHO05D007214 5.2e-16 88.2 85 52.9
AL5G38660 Arabidopsis lyrata HOM05D005891 ORTHO05D007214 6.8e-16 87.8 94 40.4
Carub.0005s2399 Capsella rubella HOM05D005891 ORTHO05D007214 8.9e-16 87.4 83 45.8
Migut.K00113 Erythranthe guttata HOM05D005891 ORTHO05D007214 1.2e-15 87.0 84 45.2
Eucgr.A02290 Eucalyptus grandis HOM05D005891 ORTHO05D007214 1.2e-15 87.0 92 44.6
CARHR119890 Cardamine hirsuta HOM05D005891 ORTHO05D007214 1.5e-15 86.7 81 45.7
Thhalv10005871m.g Eutrema salsugineum HOM05D005891 ORTHO05D007214 1.5e-15 86.7 78 47.4
Sp5g05400 Schrenkiella parvula HOM05D005891 ORTHO05D007214 3.4e-15 85.5 78 47.4
A09p50110 Brassica napus HOM05D005891 ORTHO05D007214 4.4e-15 85.1 94 43.6
C08p32480 Brassica napus HOM05D005891 ORTHO05D007214 4.4e-15 85.1 94 43.6
BolC8t50864H Brassica oleracea HOM05D005891 ORTHO05D007214 4.4e-15 85.1 94 43.6
BraA09t40462Z Brassica rapa HOM05D005891 ORTHO05D007214 4.4e-15 85.1 94 43.6
Cpa.g.sc66.72 Carica papaya HOM05D005891 ORTHO05D007214 1.3e-14 83.6 89 51.7
ATR0580G208 Amborella trichopoda HOM05D005891 ORTHO05D007214 1.7e-14 83.2 77 54.5
BcaC07g40068 Brassica carinata HOM05D005891 ORTHO05D007214 1.7e-14 83.2 78 46.2
Hund19119 Selenicereus undatus HOM05D005891 ORTHO05D007214 6.3e-14 81.3 82 47.6
Os05g0290300 Oryza sativa ssp. japonica HOM05D005891 ORTHO05D007214 8.3e-14 80.9 86 44.2
Lsat_1_v5_gn_3_23040 Lactuca sativa HOM05D005891 ORTHO05D007214 1.1e-13 80.5 88 45.5
Nn2g15043 Nelumbo nucifera HOM05D005891 ORTHO05D007214 5.4e-13 78.2 116 37.9
Zm00001eb364590 Zea mays HOM05D005891 ORTHO05D007214 1.0e-11 73.9 105 37.1
EL10Ac3g07174 Beta vulgaris HOM05D005891 ORTHO05D007214 2.9e-11 72.4 80 42.5
Lj5C499G2 Lonicera japonica HOM05D005891 ORTHO05D007214 5.0e-11 71.6 68 57.4
unitig_748.g7229 Utricularia gibba HOM05D005891 ORTHO05D007214 5.0e-11 71.6 87 39.1
Ah.13g076700 Amaranthus hybridus HOM05D005891 ORTHO05D007214 8.6e-11 70.9 81 43.2
SalBow1G2481 Salvia bowleyana HOM05D005891 ORTHO05D007214 2.1e-09 66.2 115 33.0
SEGI_09087 Sequoiadendron giganteum HOM05D005891 ORTHO05D007214 3.1e-08 62.4 74 39.2
Actinidia25408 Actinidia chinensis HOM05D029632 ORTHO05D007214 2.0e-07 59.7 74 47.3
Actinidia27820 Actinidia chinensis HOM05D029632 ORTHO05D007214 2.0e-07 59.7 74 47.3
Actinidia27821 Actinidia chinensis HOM05D029632 ORTHO05D007214 2.0e-07 59.7 74 47.3
Sabra06G0030700 Salix brachista HOM05D005891 ORTHO05D007214 7.5e-07 57.8 77 42.9
AagrBONN_evm.TU.Sc2ySwM_117.2192 Anthoceros agrestis HOM05D005891 ORTHO05D007214 1.7e-06 56.6 105 29.5
Actinidia14090 Actinidia chinensis HOM05D029632 ORTHO05D007214 3.7e-06 55.5 64 50.0
SGA_v2.0_scaffold94G28504 Striga asiatica HOM05D005891 ORTHO05D007214 4.9e-06 55.1 136 30.1
Dinv14832 Davidia involucrata HOM05D005891 ORTHO05D007214 6.4e-06 54.7 49 55.1


User provided reference genes

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