Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0027691 Camellia sinensis var. sinensis HOM05D000778 ORTHO05D000601 1.9e-139 499.2 262 100.0
CSS0016911 Camellia sinensis var. sinensis HOM05D000778 ORTHO05D000601 1.0e-92 344.0 179 100.0
Dinv17935 Davidia involucrata HOM05D000778 ORTHO05D000601 7.8e-48 194.9 166 66.9
Hma1.2p1_3492F.1_g336400 Hydrangea macrophylla HOM05D000778 ORTHO05D000601 2.3e-36 156.8 167 56.3
Rhsim07G0074700 Rhododendron simsii HOM05D000778 ORTHO05D000601 5.2e-36 155.6 161 57.8
CSS0034329 Camellia sinensis var. sinensis HOM05D000778 ORTHO05D000601 1.5e-35 154.1 159 58.5
CSS0010513 Camellia sinensis var. sinensis HOM05D000778 ORTHO05D000601 9.8e-35 151.4 159 57.2
vmacro13817 Vaccinium macrocarpon HOM05D000778 ORTHO05D000601 5.1e-31 139.0 140 57.9
Actinidia17462 Actinidia chinensis HOM05D000778 ORTHO05D000601 2.1e-29 133.7 163 53.4
Peaxi162Scf00282g00075 Petunia axillaris HOM05D000778 ORTHO05D000601 3.6e-29 132.9 159 50.9
Nitab4.5_0002247g0020 Nicotiana tabacum HOM05D000778 ORTHO05D000601 2.0e-27 127.1 157 51.0
Solyc01g097120.3 Solanum lycopersicum HOM05D000778 ORTHO05D000601 1.7e-26 124.0 142 52.1
Sopen01g040800 Solanum pennellii HOM05D000778 ORTHO05D000601 4.9e-26 122.5 142 52.1
PGSC0003DMG400027517 Solanum tuberosum HOM05D000778 ORTHO05D000601 8.3e-26 121.7 142 51.4
CiPaw.07G068900 Carya illinoinensis HOM05D000778 ORTHO05D000601 9.2e-25 118.2 172 44.8
Haze_04380 Corylus avellana HOM05D000778 ORTHO05D000601 3.3e-22 109.8 173 45.1
QL03p027737 Quercus lobata HOM05D000778 ORTHO05D000601 9.6e-22 108.2 173 45.7
TAR362G1294 Trochodendron aralioides HOM05D000778 ORTHO05D000601 2.1e-21 107.1 192 43.8
CiPaw.08G121800 Carya illinoinensis HOM05D000778 ORTHO05D000601 3.6e-21 106.3 174 45.4
Oeu016448.1 Olea europaea HOM05D000778 ORTHO05D000601 2.4e-20 103.6 164 45.7
Oeu038461.1 Olea europaea HOM05D000778 ORTHO05D000601 2.4e-20 103.6 101 57.4
DCAR_006641 Daucus carota HOM05D000778 ORTHO05D000601 4.0e-20 102.8 151 42.4
Cc02_g30920 Coffea canephora HOM05D000778 ORTHO05D000601 6.8e-20 102.1 165 43.6
GSVIVG01036233001 Vitis vinifera HOM05D000778 ORTHO05D000601 6.8e-20 102.1 169 44.4
Lj5g0016838 Lotus japonicus HOM05D000778 ORTHO05D000601 2.0e-19 100.5 160 45.0
CAN.G134.72 Capsicum annuum HOM05D000778 ORTHO05D000601 3.8e-18 96.3 156 41.7
SalBow4G2427 Salvia bowleyana HOM05D000778 ORTHO05D000601 3.8e-18 96.3 164 41.5
CANSAT54G1766 Cannabis sativa HOM05D000778 ORTHO05D000601 4.9e-18 95.9 160 44.4
Glyma.10G163400 Glycine max HOM05D000778 ORTHO05D000601 8.4e-18 95.1 160 45.0
TWI77G0756 Tripterygium wilfordii HOM05D000778 ORTHO05D000601 8.4e-18 95.1 164 44.5
TWI53G0374 Tripterygium wilfordii HOM05D000778 ORTHO05D000601 1.4e-17 94.4 164 45.1
TWI74G0729 Tripterygium wilfordii HOM05D000778 ORTHO05D000601 2.4e-17 93.6 164 43.9
Nitab4.5_0012146g0020 Nicotiana tabacum HOM05D000778 ORTHO05D000601 4.2e-17 92.8 154 41.6
VMungo0720G1383 Vigna mungo HOM05D000778 ORTHO05D000601 5.4e-17 92.4 160 44.4
TAR636G0879 Trochodendron aralioides HOM05D000778 ORTHO05D000601 2.1e-16 90.5 200 39.5
Potri.013G042800 Populus trichocarpa HOM05D000778 ORTHO05D000601 4.6e-16 89.4 164 42.7
Manes.08G136500 Manihot esculenta HOM05D000778 ORTHO05D000601 3.0e-15 86.7 164 40.9
Phvul.007G188500 Phaseolus vulgaris HOM05D000778 ORTHO05D000601 3.0e-15 86.7 159 42.8
TPR.G6941 Trifolium pratense HOM05D000778 ORTHO05D000601 3.9e-15 86.3 164 42.1
Oeu014608.1 Olea europaea HOM05D000778 ORTHO05D000601 5.1e-15 85.9 155 39.4
Prupe.6G345500 Prunus persica HOM05D000778 ORTHO05D000601 5.1e-15 85.9 104 51.0
Ca_10037_v3 Cicer arietinum L. HOM05D000778 ORTHO05D000601 6.6e-15 85.5 163 41.7
Ciclev10028698m.g Citrus clementina HOM05D000778 ORTHO05D000601 6.6e-15 85.5 160 43.1
DCAR_025324 Daucus carota HOM05D000778 ORTHO05D000601 8.7e-15 85.1 151 45.0
Glyma.20G226000 Glycine max HOM05D000778 ORTHO05D000601 8.7e-15 85.1 160 43.1
TAR633G0617 Trochodendron aralioides HOM05D000778 ORTHO05D000601 4.3e-14 82.8 193 37.8
arahy.Tifrunner.gnm1.ann1.EA9INV Arachis hypogaea HOM05D000778 ORTHO05D000601 1.6e-13 80.9 161 36.6
Medtr7g115310 Medicago truncatula HOM05D005123 ORTHO05D006532 1.6e-13 80.9 156 42.3
Potri.005G055900 Populus trichocarpa HOM05D000778 ORTHO05D000601 3.6e-13 79.7 159 40.9
SalBow4G1089 Salvia bowleyana HOM05D000778 ORTHO05D000601 4.8e-13 79.3 164 37.8
ECA246G4794 Erigeron canadensis HOM05D000778 ORTHO05D000601 8.1e-13 78.6 116 47.4
arahy.Tifrunner.gnm1.ann1.7M06WQ Arachis hypogaea HOM05D000778 ORTHO05D000601 2.4e-12 77.0 161 36.6
Ca_09431_v3 Cicer arietinum L. HOM05D000778 ORTHO05D000601 4.0e-12 76.3 164 40.2
Eucgr.H04316 Eucalyptus grandis HOM05D000778 ORTHO05D000601 4.0e-12 76.3 155 39.4
Duzib177G0114 Durio zibethinus HOM05D000778 ORTHO05D000601 1.5e-11 74.3 110 44.5
Manes.09G151100 Manihot esculenta HOM05D000778 ORTHO05D000601 2.6e-11 73.6 168 41.7
Medtr1g080690 Medicago truncatula HOM05D000778 ORTHO05D000601 3.4e-11 73.2 160 38.1
Thecc.05G280400 Theobroma cacao HOM05D000778 ORTHO05D000601 4.4e-11 72.8 144 41.0
RcHm_v2.0_Chr3g0450511 Rosa chinensis HOM05D000778 ORTHO05D000601 7.6e-11 72.0 162 37.0
Duzib128G1416 Durio zibethinus HOM05D000778 ORTHO05D000601 1.3e-10 71.2 95 47.4
Sed0004657 Sechium edule HOM05D000778 ORTHO05D000601 3.8e-10 69.7 171 34.5
FAN09G1711 Fragaria x ananassa HOM05D000778 ORTHO05D000601 1.1e-09 68.2 161 35.4
Cpa.g.sc736.4 Carica papaya HOM05D000778 ORTHO05D000601 1.4e-09 67.8 172 35.5
ClCG00G000500 Citrullus lanatus HOM05D000778 ORTHO05D000601 1.4e-09 67.8 172 35.5
FAN14G1742 Fragaria x ananassa HOM05D000778 ORTHO05D000601 1.4e-09 67.8 161 36.0
FAN14G5396 Fragaria x ananassa HOM05D000778 ORTHO05D000601 1.4e-09 67.8 161 36.0
PGR004G1927 Punica granatum HOM05D000778 ORTHO05D000601 2.4e-09 67.0 160 39.4
Glyma.03G248000 Glycine max HOM05D000778 ORTHO05D000601 4.2e-09 66.2 165 35.8
MD04G1226800 Malus domestica HOM05D000778 ORTHO05D000601 4.2e-09 66.2 89 48.3
ClCG00G001370 Citrullus lanatus HOM05D000778 ORTHO05D000601 7.1e-09 65.5 172 34.9
FAN05G1731 Fragaria x ananassa HOM05D000778 ORTHO05D000601 7.1e-09 65.5 161 34.2
FAN05G5635 Fragaria x ananassa HOM05D000778 ORTHO05D000601 7.1e-09 65.5 161 34.2
Thecc.04G246400 Theobroma cacao HOM05D000778 ORTHO05D000601 7.1e-09 65.5 190 37.9
FvH4_6g02600 Fragaria vesca HOM05D000778 ORTHO05D000601 9.3e-09 65.1 161 35.4
Sed0011565 Sechium edule HOM05D000778 ORTHO05D000601 2.1e-08 63.9 171 33.9
Manes.03G168600 Manihot esculenta HOM05D000778 ORTHO05D000601 2.7e-08 63.5 190 36.3
FAN02G1645 Fragaria x ananassa HOM05D000778 ORTHO05D000601 3.5e-08 63.2 161 34.2
EL10Ac4g09080 Beta vulgaris HOM05D000778 ORTHO05D000601 4.6e-08 62.8 163 37.4
Aqoxy2G03567 Aquilegia oxysepala HOM05D000778 ORTHO05D000601 7.8e-08 62.0 176 33.0
CsaV3_1G045490 Cucumis sativus L. HOM05D000778 ORTHO05D000601 2.3e-07 60.5 174 32.8
HanXRQChr05g0158371 Helianthus annuus HOM05D000778 ORTHO05D000601 2.3e-07 60.5 161 32.9
THA.LOC104805825 Tarenaya hassleriana HOM05D000778 ORTHO05D000601 3.0e-07 60.1 159 37.1
MELO3C024656.2 Cucumis melo HOM05D000778 ORTHO05D000601 5.1e-07 59.3 174 32.8
Nn3g19543 Nelumbo nucifera HOM05D000778 ORTHO05D000601 6.6e-07 58.9 196 33.2
Haze_11302 Corylus avellana HOM05D000778 ORTHO05D000601 1.1e-06 58.2 194 35.1
Gorai.004G247600 Gossypium raimondii HOM05D000778 ORTHO05D000601 1.1e-06 58.2 162 31.5
Atru.chr2.856 Acer truncatum HOM05D000778 ORTHO05D000601 1.5e-06 57.8 164 34.8
Haze_11304 Corylus avellana HOM05D000778 ORTHO05D000601 1.5e-06 57.8 194 35.1
MELO3C004396.2 Cucumis melo HOM05D000778 ORTHO05D000601 1.9e-06 57.4 82 41.5
Gohir.D08G233100 Gossypium hirsutum HOM05D000778 ORTHO05D000601 2.5e-06 57.0 162 30.9
Sabra13G0039200 Salix brachista HOM05D000778 ORTHO05D000601 2.5e-06 57.0 133 39.8
Duzib106G0680 Durio zibethinus HOM05D000778 ORTHO05D000601 3.3e-06 56.6 160 34.4
Sc20g0000460 Simmondsia chinensis HOM05D000778 ORTHO05D000601 3.3e-06 56.6 168 33.3
CsaV3_2G003950 Cucumis sativus L. HOM05D000778 ORTHO05D000601 9.6e-06 55.1 81 42.0
TPR.G21822 Trifolium pratense HOM05D000778 ORTHO05D000601 9.6e-06 55.1 155 36.1


User provided reference genes

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