Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0027667 Camellia sinensis var. sinensis HOM05D038144 ORTHO05D002977 7.9e-45 183.3 89 100.0
CSS0041184 Camellia sinensis var. sinensis HOM05D038144 ORTHO05D110638 5.9e-32 140.6 105 72.4
CSS0023264 Camellia sinensis var. sinensis HOM05D038144 ORTHO05D113351 2.0e-19 99.0 89 61.8
Potri.001G101100 Populus trichocarpa HOM05D002625 ORTHO05D002977 1.0e-07 60.1 37 78.4
CSS0008846 Camellia sinensis var. sinensis HOM05D002625 ORTHO05D002977 2.9e-07 58.5 29 93.1
Potri.003G130700 Populus trichocarpa HOM05D002625 ORTHO05D002977 2.9e-07 58.5 37 75.7
CiPaw.11G132400 Carya illinoinensis HOM05D002625 ORTHO05D002977 3.9e-07 58.2 35 77.1
Hma1.2p1_1123F.1_g259390 Hydrangea macrophylla HOM05D002625 ORTHO05D002977 6.6e-07 57.4 35 77.1
TWI81G0702 Tripterygium wilfordii HOM05D002625 ORTHO05D002977 8.6e-07 57.0 37 73.0
Duzib068G1381 Durio zibethinus HOM05D002625 ORTHO05D002977 1.1e-06 56.6 35 77.1
Sabra03G0092900 Salix brachista HOM05D002625 ORTHO05D002977 1.1e-06 56.6 29 86.2
MSTRG.11968 Avicennia marina HOM05D002625 ORTHO05D002977 1.9e-06 55.8 39 69.2
CiPaw.12G090800 Carya illinoinensis HOM05D002625 ORTHO05D002977 1.9e-06 55.8 35 74.3
Manes.01G059200 Manihot esculenta HOM05D002625 ORTHO05D002977 1.9e-06 55.8 35 74.3
Sabra01G0076100 Salix brachista HOM05D002625 ORTHO05D002977 1.9e-06 55.8 38 68.4
TWI60G0865 Tripterygium wilfordii HOM05D002625 ORTHO05D002977 3.3e-06 55.1 39 66.7
Dinv37617 Davidia involucrata HOM05D002625 ORTHO05D002977 4.3e-06 54.7 35 71.4
SGA_v2.0_scaffold96G28923 Striga asiatica HOM05D002625 ORTHO05D002977 4.3e-06 54.7 39 66.7
TAR335G0003 Trochodendron aralioides HOM05D002625 ORTHO05D002977 4.3e-06 54.7 37 70.3
Gorai.004G139700 Gossypium raimondii HOM05D002625 ORTHO05D002977 5.6e-06 54.3 35 68.6
Lj4g0007440 Lotus japonicus HOM05D002625 ORTHO05D002977 5.6e-06 54.3 35 74.3
GSVIVG01019394001 Vitis vinifera HOM05D002625 ORTHO05D002977 7.3e-06 53.9 35 74.3
Gohir.A08G115700 Gossypium hirsutum HOM05D002625 ORTHO05D002977 9.5e-06 53.5 35 68.6
Gohir.D08G136500 Gossypium hirsutum HOM05D002625 ORTHO05D002977 9.5e-06 53.5 35 68.6


User provided reference genes

Program Settings