Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0027643 Camellia sinensis var. sinensis HOM05D006646 ORTHO05D008279 2.6e-134 482.3 282 100.0
CSS0016085 Camellia sinensis var. sinensis HOM05D006646 ORTHO05D008279 2.7e-131 472.2 282 96.8
Dinv23471 Davidia involucrata HOM05D006646 ORTHO05D008279 7.1e-55 218.4 261 57.5
vmacro02064 Vaccinium macrocarpon HOM05D006646 ORTHO05D008279 1.2e-54 217.6 193 65.3
CiPaw.06G130600 Carya illinoinensis HOM05D006646 ORTHO05D008279 4.6e-54 215.7 143 78.3
Hma1.2p1_0851F.1_g228260 Hydrangea macrophylla HOM05D006646 ORTHO05D008279 1.8e-50 203.8 279 54.8
Duzib132G1122 Durio zibethinus HOM05D006646 ORTHO05D008279 2.6e-49 199.9 160 68.8
Ciclev10028627m.g Citrus clementina HOM05D006646 ORTHO05D008279 7.6e-49 198.4 153 69.3
QL11p045794 Quercus lobata HOM05D006646 ORTHO05D008279 9.9e-49 198.0 254 53.1
CAN.G170.87 Capsicum annuum HOM05D006646 ORTHO05D008279 2.2e-48 196.8 242 53.3
Gohir.A12G041400 Gossypium hirsutum HOM05D006646 ORTHO05D008279 3.7e-48 196.1 141 71.6
TAR376G0115 Trochodendron aralioides HOM05D006646 ORTHO05D008279 4.9e-48 195.7 143 71.3
Potri.009G122500 Populus trichocarpa HOM05D006646 ORTHO05D008279 1.1e-47 194.5 256 50.8
COL.COLO4_26029 Corchorus olitorius HOM05D006646 ORTHO05D008279 1.4e-47 194.1 156 64.7
Eucgr.G01718 Eucalyptus grandis HOM05D006646 ORTHO05D008279 1.4e-47 194.1 291 50.5
PGSC0003DMG400003128 Solanum tuberosum HOM05D006646 ORTHO05D008279 1.9e-47 193.7 248 53.6
Gohir.D12G030800 Gossypium hirsutum HOM05D006646 ORTHO05D008279 4.1e-47 192.6 141 70.9
Gorai.008G031700 Gossypium raimondii HOM05D006646 ORTHO05D008279 4.1e-47 192.6 141 70.9
Solyc01g110270.3 Solanum lycopersicum HOM05D006646 ORTHO05D008279 1.6e-46 190.7 278 52.2
Migut.B00188 Erythranthe guttata HOM05D006646 ORTHO05D008279 2.1e-46 190.3 291 47.8
Oeu008579.1 Olea europaea HOM05D006646 ORTHO05D008279 2.7e-46 189.9 160 66.9
Peaxi162Scf00016g00142 Petunia axillaris HOM05D006646 ORTHO05D008279 2.7e-46 189.9 142 73.9
Cpa.g.sc150.36 Carica papaya HOM05D006646 ORTHO05D008279 4.6e-46 189.1 149 67.8
HanXRQChr05g0139661 Helianthus annuus HOM05D006646 ORTHO05D008279 4.6e-46 189.1 242 52.5
Sopen01g052420 Solanum pennellii HOM05D006646 ORTHO05D008279 1.0e-45 188.0 262 51.5
DCAR_022798 Daucus carota HOM05D006646 ORTHO05D008279 1.3e-45 187.6 260 51.2
Manes.04G084900 Manihot esculenta HOM05D006646 ORTHO05D008279 2.3e-45 186.8 289 51.2
Thecc.02G077600 Theobroma cacao HOM05D006646 ORTHO05D008279 3.0e-45 186.4 240 51.2
Nitab4.5_0010034g0020 Nicotiana tabacum HOM05D006646 ORTHO05D008279 5.1e-45 185.7 291 49.5
Lsat_1_v5_gn_4_68441 Lactuca sativa HOM05D006646 ORTHO05D008279 1.1e-44 184.5 122 77.0
Cfa005079 Carpinus fangiana HOM05D006646 ORTHO05D008279 3.3e-44 183.0 148 66.9
Nn6g32216 Nelumbo nucifera HOM05D006646 ORTHO05D008279 5.6e-44 182.2 252 48.4
GSVIVG01024200001 Vitis vinifera HOM05D006646 ORTHO05D008279 5.6e-44 182.2 141 70.2
PGR042G2699 Punica granatum HOM05D006646 ORTHO05D008279 9.6e-44 181.4 137 70.1
MSTRG.16840 Avicennia marina HOM05D006646 ORTHO05D008279 1.2e-43 181.0 147 70.1
Aqoxy6G02397 Aquilegia oxysepala HOM05D006646 ORTHO05D008279 2.8e-43 179.9 171 59.1
ECA247G1974 Erigeron canadensis HOM05D006646 ORTHO05D008279 3.6e-43 179.5 126 72.2
arahy.Tifrunner.gnm1.ann1.I36BMJ Arachis hypogaea HOM05D006646 ORTHO05D008279 8.1e-43 178.3 155 61.3
TWI75G0841 Tripterygium wilfordii HOM05D006646 ORTHO05D008279 2.4e-42 176.8 233 48.1
Glyma.11G112300 Glycine max HOM05D006646 ORTHO05D008279 4.0e-42 176.0 245 47.3
MBI05_g30638_MAGBIO Magnolia biondii HOM05D006646 ORTHO05D008279 5.2e-42 175.6 142 71.1
SGA_v2.0_scaffold58G20474 Striga asiatica HOM05D006646 ORTHO05D008279 1.2e-41 174.5 257 46.7
VMungo1127G0939 Vigna mungo HOM05D006646 ORTHO05D008279 2.6e-41 173.3 234 50.4
MD10G1065400 Malus domestica HOM05D006646 ORTHO05D008279 4.4e-41 172.6 228 47.8
MELO3C013428.2 Cucumis melo HOM05D006646 ORTHO05D008279 5.8e-41 172.2 158 57.0
Prupe.8G087400 Prunus persica HOM05D006646 ORTHO05D008279 5.8e-41 172.2 269 46.8
Cc02_g17030 Coffea canephora HOM05D006646 ORTHO05D008279 1.7e-40 170.6 280 45.4
CDE09G0634 Ceratophyllum demersum HOM05D006646 ORTHO05D008279 2.9e-40 169.9 138 66.7
CsaV3_7G000290 Cucumis sativus L. HOM05D006646 ORTHO05D008279 2.9e-40 169.9 140 64.3
EL10Ac9g21659 Beta vulgaris HOM05D006646 ORTHO05D008279 6.4e-40 168.7 140 62.1
TPR.G16241 Trifolium pratense HOM05D006646 ORTHO05D008279 6.4e-40 168.7 233 48.5
Atru.chr5.3116 Acer truncatum HOM05D006646 ORTHO05D008279 8.4e-40 168.3 119 70.6
SalBow6G1011 Salvia bowleyana HOM05D006646 ORTHO05D008279 1.1e-39 167.9 221 51.1
THA.LOC104807761 Tarenaya hassleriana HOM05D006646 ORTHO05D008279 1.1e-39 167.9 299 44.5
ATR0661G343 Amborella trichopoda HOM05D006646 ORTHO05D008279 1.4e-39 167.5 153 62.1
Lalb_Chr01g0002221 Lupinus albus HOM05D006646 ORTHO05D008279 3.2e-39 166.4 255 46.7
Phvul.011G040400 Phaseolus vulgaris HOM05D006646 ORTHO05D008279 3.2e-39 166.4 232 48.7
arahy.Tifrunner.gnm1.ann1.RI2JL3 Arachis hypogaea HOM05D006646 ORTHO05D008279 4.2e-39 166.0 140 64.3
Sed0000071 Sechium edule HOM05D006646 ORTHO05D008279 4.2e-39 166.0 230 48.3
CDE02G3850 Ceratophyllum demersum HOM05D006646 ORTHO05D008279 7.1e-39 165.2 138 64.5
Sed0001649 Sechium edule HOM05D006646 ORTHO05D008279 9.3e-39 164.9 250 47.2
AUR62016804 Chenopodium quinoa HOM05D006646 ORTHO05D008279 1.2e-38 164.5 163 56.4
FAN27G0283 Fragaria x ananassa HOM05D006646 ORTHO05D008279 3.5e-38 162.9 204 49.0
Lj3g0021213 Lotus japonicus HOM05D006646 ORTHO05D008279 4.6e-38 162.5 172 58.1
PSO541G0619 Papaver somniferum HOM05D006646 ORTHO05D008279 4.6e-38 162.5 229 48.5
Sc18g0005310 Simmondsia chinensis HOM05D006646 ORTHO05D008279 7.8e-38 161.8 149 62.4
Aa31LG6G16210 Aethionema arabicum HOM05D006646 ORTHO05D008279 1.0e-37 161.4 180 56.1
unitig_32.g11060 Utricularia gibba HOM05D006646 ORTHO05D008279 2.3e-37 160.2 114 74.6
Ca_20923_v3 Cicer arietinum L. HOM05D006646 ORTHO05D008279 3.9e-37 159.5 237 45.1
Haze_02302 Corylus avellana HOM05D006646 ORTHO05D008279 3.9e-37 159.5 270 46.7
FAN15G0580 Fragaria x ananassa HOM05D006646 ORTHO05D008279 6.6e-37 158.7 223 46.6
FvH4_2g10110 Fragaria vesca HOM05D006646 ORTHO05D008279 8.7e-37 158.3 236 45.3
ClCG02G004640 Citrullus lanatus HOM05D006646 ORTHO05D008279 1.1e-36 157.9 113 68.1
FAN24G1192 Fragaria x ananassa HOM05D006646 ORTHO05D008279 2.5e-36 156.8 236 45.3
RcHm_v2.0_Chr6g0267071 Rosa chinensis HOM05D006646 ORTHO05D008279 3.3e-36 156.4 268 45.1
Sp7g36790 Schrenkiella parvula HOM05D006646 ORTHO05D008279 3.3e-36 156.4 176 55.1
Medtr4g071330 Medicago truncatula HOM05D006646 ORTHO05D008279 5.6e-36 155.6 260 44.6
Hund06269 Selenicereus undatus HOM05D006646 ORTHO05D008279 7.3e-36 155.2 261 43.7
BraA06t27738Z Brassica rapa HOM05D006646 ORTHO05D008279 1.3e-35 154.5 171 55.0
Psat0s2721g0040 Pisum sativum HOM05D006646 ORTHO05D008279 1.3e-35 154.5 237 44.3
A06p48720 Brassica napus HOM05D006646 ORTHO05D008279 2.1e-35 153.7 171 55.0
BolC7t46749H Brassica oleracea HOM05D006646 ORTHO05D008279 4.8e-35 152.5 176 54.0
CARHR247710 Cardamine hirsuta HOM05D006646 ORTHO05D008279 2.4e-34 150.2 299 41.1
BcaNung01943 Brassica carinata HOM05D006646 ORTHO05D008279 3.1e-34 149.8 145 57.9
C07p63380 Brassica napus HOM05D006646 ORTHO05D008279 3.1e-34 149.8 145 57.9
AL7G10980 Arabidopsis lyrata HOM05D006646 ORTHO05D008279 3.4e-33 146.4 170 53.5
Thhalv10025960m.g Eutrema salsugineum HOM05D006646 ORTHO05D008279 3.8e-32 142.9 140 57.9
AT2G21350 Arabidopsis thaliana HOM05D006646 ORTHO05D008279 6.4e-32 142.1 101 71.3
AL4G10520 Arabidopsis lyrata HOM05D006646 ORTHO05D008279 8.4e-32 141.7 103 70.9
AT4G39040 Arabidopsis thaliana HOM05D006646 ORTHO05D008279 1.4e-31 141.0 120 62.5
Carub.0007s0091 Capsella rubella HOM05D006646 ORTHO05D008279 1.4e-31 141.0 298 43.3
CARHR112230 Cardamine hirsuta HOM05D006646 ORTHO05D008279 1.4e-31 141.0 99 73.7
HPP92_007403 Vanilla planifolia HOM05D006646 ORTHO05D008279 1.2e-30 137.9 221 46.2
BcaC02g08796 Brassica carinata HOM05D006646 ORTHO05D008279 1.6e-30 137.5 116 63.8
C04p50570 Brassica napus HOM05D006646 ORTHO05D008279 1.6e-30 137.5 116 63.8
Carub.0004s0039 Capsella rubella HOM05D006646 ORTHO05D008279 2.7e-30 136.7 209 45.5
Os10g0512500 Oryza sativa ssp. japonica HOM05D006646 ORTHO05D008279 4.6e-30 136.0 156 50.0
A04p16110 Brassica napus HOM05D006646 ORTHO05D008279 1.3e-29 134.4 195 47.2
BraA04t17251Z Brassica rapa HOM05D006646 ORTHO05D008279 1.3e-29 134.4 195 47.2
BolC4t26655H Brassica oleracea HOM05D006646 ORTHO05D008279 1.7e-29 134.0 184 49.5
Sp4g00530 Schrenkiella parvula HOM05D006646 ORTHO05D008279 2.5e-28 130.2 112 62.5
Nitab4.5_0002723g0110 Nicotiana tabacum HOM05D006646 ORTHO05D008279 9.6e-28 128.3 286 39.5
Thhalv10000312m.g Eutrema salsugineum HOM05D006646 ORTHO05D008279 3.6e-27 126.3 110 62.7
AUR62010412 Chenopodium quinoa HOM05D006646 ORTHO05D008279 5.5e-23 112.5 143 46.9
Mapoly0113s0060 Marchantia polymorpha HOM05D006646 ORTHO05D008279 1.9e-20 104.0 115 47.0
CBR_g11057 Chara braunii HOM05D006646 ORTHO05D008279 1.6e-19 100.9 96 49.0
AagrBONN_evm.TU.Sc2ySwM_344.4239 Anthoceros agrestis HOM05D006646 ORTHO05D008279 2.4e-18 97.1 110 50.0
FAN09G3166 Fragaria x ananassa HOM05D006646 ORTHO05D008279 5.8e-17 92.4 79 59.5
FAN24G0918 Fragaria x ananassa HOM05D001806 ORTHO05D002069 5.8e-17 92.4 78 60.3
Pp3c1_22260 Physcomitrium patens HOM05D006646 ORTHO05D008279 5.8e-17 92.4 115 41.7
FAN05G0067 Fragaria x ananassa HOM05D006646 ORTHO05D008279 2.9e-16 90.1 58 74.1
FAN05G1359 Fragaria x ananassa HOM05D006646 ORTHO05D008279 2.9e-16 90.1 58 74.1
arahy.Tifrunner.gnm1.ann1.1G50NI Arachis hypogaea HOM05D006646 ORTHO05D008279 3.8e-16 89.7 54 79.6
FAN19G2814 Fragaria x ananassa HOM05D006646 ORTHO05D008279 3.8e-16 89.7 77 59.7
FAN18G1095 Fragaria x ananassa HOM05D006646 ORTHO05D008279 8.4e-16 88.6 59 71.2
CANSAT11G0453 Cannabis sativa HOM05D006646 ORTHO05D008279 9.3e-15 85.1 60 68.3
Lj5P190T58 Lonicera japonica HOM05D006646 ORTHO05D008279 1.6e-14 84.3 54 75.9
BcaNung01286 Brassica carinata HOM05D006646 ORTHO05D008279 6.0e-14 82.4 112 51.8
Zm00001eb220380 Zea mays HOM05D006646 ORTHO05D008279 4.3e-12 76.3 54 70.4
Haze_22123 Corylus avellana HOM05D006646 ORTHO05D008279 1.4e-10 71.2 52 71.2
SMO367G1025 Selaginella moellendorffii HOM05D006646 ORTHO05D008279 6.9e-10 68.9 92 40.2


User provided reference genes

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